Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176400.1 | Wheat | cytosol | 70.16 | 95.38 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 94.68 | 95.1 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 94.53 | 94.96 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 79.32 | 81.12 |
| Os11t0705900-01 | Rice | cytosol | 58.64 | 61.84 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 55.24 | 58.53 |
| Zm00001d048601_P001 | Maize | cytosol | 54.36 | 57.32 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 50.52 | 52.37 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 58.2 | 49.68 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 47.56 | 45.54 |
| HORVU4Hr1G080460.5 | Barley | cytosol | 39.0 | 45.36 |
| HORVU5Hr1G020900.1 | Barley | cytosol | 49.34 | 44.83 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.66 | 43.21 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 27.77 | 41.23 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 36.04 | 37.89 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 40.77 | 35.07 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.69 | 33.72 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 39.29 | 33.63 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 33.53 | 31.57 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 21.12 | 25.67 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 18.76 | 23.69 |
| HORVU2Hr1G043780.1 | Barley | cytosol | 19.35 | 22.98 |
| HORVU3Hr1G091250.1 | Barley | cytosol | 18.46 | 22.64 |
| HORVU5Hr1G099160.1 | Barley | plastid | 20.09 | 21.59 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 9.45 | 16.62 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G027610.1 | EnsemblPlantsGene:HORVU4Hr1G027610 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF20 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI000B468424 | UniProt:A0A287NN83 |
| MapMan:15.5.12 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:169472472..169485623
Molecular Weight (calculated)
75498.0 Da
IEP (calculated)
6.253
GRAVY (calculated)
-0.363
Length
677 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPEEFLG QQSFLARLEP PSPSLFLGLP PTPRGVDDRD SSFDDMALPY ISRLLEEDME DHFFYLYPNH PALLRAQLPF AQILVDVADS ASGSTSALSP
101: SSSTSTSTSD ATTPSTTSPY DAAIQISRLP YTQVLGLASG SPDTQSSALL SGDEEAQNPS SDFVIGNYLL PGDQDMLNLS FLKGMEEARK FLPPNSSLPV
201: PAMKVDQAVD GALAGAGLKK KRDTLEPDMG RASKLMTPEQ EEVGAREMFD EMMFQEHEIC MKGVQQLCLR IAVDGEPGKN RRKKGRPRQD SSDSEMVDLQ
301: TLLLNCAQAL STDNRRTASE LLKRIRQHST PKGDAAQRLA HYFGEALDAR LAGRGSELYQ SLMARRTSVA DFLKANQLYM AACCCKKVAF IFANKTICNA
401: VVGRSRLHIV DYGLSQGLQW PGLLRMLAAR EGGPPEVKIT GIDLPQPGFH GAYHIEETGR RLSNFAHVFG VPFKFHGIPA KRETVKPEDL NIDRDEVLVV
501: ISLCHFRLLM DENLGFDTPS PRDQVLNNIR KMRPDVFIHG IMNGSYGATY FLTRFREALF NYSAQFDLLD ATVPRDNEGR LLLERDIFGR SALNVIACEG
601: ADRVERPETY KQWQLRNHRA GLRQLPLNPD VVRLVLDKVK DNYHKDFVVD DDQRWLLHRW KGRVLYALST WVADNAT
101: SSSTSTSTSD ATTPSTTSPY DAAIQISRLP YTQVLGLASG SPDTQSSALL SGDEEAQNPS SDFVIGNYLL PGDQDMLNLS FLKGMEEARK FLPPNSSLPV
201: PAMKVDQAVD GALAGAGLKK KRDTLEPDMG RASKLMTPEQ EEVGAREMFD EMMFQEHEIC MKGVQQLCLR IAVDGEPGKN RRKKGRPRQD SSDSEMVDLQ
301: TLLLNCAQAL STDNRRTASE LLKRIRQHST PKGDAAQRLA HYFGEALDAR LAGRGSELYQ SLMARRTSVA DFLKANQLYM AACCCKKVAF IFANKTICNA
401: VVGRSRLHIV DYGLSQGLQW PGLLRMLAAR EGGPPEVKIT GIDLPQPGFH GAYHIEETGR RLSNFAHVFG VPFKFHGIPA KRETVKPEDL NIDRDEVLVV
501: ISLCHFRLLM DENLGFDTPS PRDQVLNNIR KMRPDVFIHG IMNGSYGATY FLTRFREALF NYSAQFDLLD ATVPRDNEGR LLLERDIFGR SALNVIACEG
601: ADRVERPETY KQWQLRNHRA GLRQLPLNPD VVRLVLDKVK DNYHKDFVVD DDQRWLLHRW KGRVLYALST WVADNAT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.