Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136500.1 | Wheat | peroxisome | 86.63 | 89.57 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 91.05 | 89.47 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 89.16 | 88.15 |
| Os11t0705200-01 | Rice | cytosol | 54.73 | 62.72 |
| OQU84105 | Sorghum | cytosol | 57.25 | 62.19 |
| Zm00001d048604_P001 | Maize | cytosol | 57.88 | 60.0 |
| HORVU4Hr1G027610.1 | Barley | cytosol | 49.68 | 58.2 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 47.54 | 56.95 |
| KXG36217 | Sorghum | cytosol | 58.39 | 55.78 |
| HORVU4Hr1G027520.2 | Barley | cytosol, peroxisome | 45.15 | 54.82 |
| HORVU5Hr1G020900.1 | Barley | cytosol | 46.03 | 48.99 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 40.73 | 45.69 |
| HORVU4Hr1G080460.5 | Barley | cytosol | 33.29 | 45.36 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 24.97 | 44.1 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 23.96 | 41.67 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 32.91 | 40.53 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 36.07 | 36.16 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 35.81 | 36.09 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 25.47 | 33.89 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 29.89 | 32.96 |
| Zm00001d048603_P001 | Maize | cytosol | 58.51 | 32.61 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 17.65 | 25.13 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 16.14 | 23.88 |
| HORVU3Hr1G091250.1 | Barley | cytosol | 15.89 | 22.83 |
| HORVU2Hr1G043780.1 | Barley | cytosol | 16.14 | 22.46 |
| HORVU5Hr1G099160.1 | Barley | plastid | 17.28 | 21.75 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 7.69 | 15.84 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G027920.1 | EnsemblPlantsGene:HORVU4Hr1G027920 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF59 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI000B482025 | UniProt:A0A287NNJ9 |
| MapMan:15.5.12 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:171923610..171927659
Molecular Weight (calculated)
87255.1 Da
IEP (calculated)
6.434
GRAVY (calculated)
-0.403
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPDEFLR AGDFLADAEP FSPSLFLDLP PTPSPPRAAP ASDDLDLDFI SRMLMEEDMD DKFFYQYPDH PAILSAQHRL AQVISGSNTA PSTDDSANTT
101: VASSTFSSDS ATGRSASSCS DSATNTGKST CSFHSTTNTA HSTSCSSSPG GLAPANPTWP YDRIYLSQPL HSPPYNANNL FFSGVGTPTA GYFGHTPALS
201: KGNNDYFLAP AGQNGRSTGM QSFAALSNSS AAKDAKTLSN NGGSCRGGPC TPASAFFNGQ TDGDVDMLNM AFRKGMEEAN KFLPTTNTLD AISNKPVLRD
301: LTGDQLKKEE VDRLRMSMFS NGRGRKNRHG AEDLEAEVGR RSKLMMPEQE DTGVGEMVEE IMLHGHEIIM KGIEDLHIAM DTEAEKNHRK GASKAARGRR
401: GASEVVDLRT MLIHCAQAVA TGDRRGSNEL LKQIKQHSSA KGDATQRLAY CFAEGLEARL AGTGSHVYQS LMAKSTSVGE FLRAYKLYMA ASSFRKVNFI
501: FVGKIIMDAM VGKSRLHIVD YNVQYGFQWP GLLQMLAERE GGPPDVRITG IDLPQPGFRP AFQIEETGRR LSKCAREFGV PFKYHGIPAK FETVHAEDLN
601: IDPDEVLIVT SQSGFSNLMD ESVIMDRQDI PSPRDMVLSN IRKMRPDVFI DCVVNGTYGA PFFVTRFREA LFSYSAQFDM LDATIPRDND DRLLIERDIF
701: GPCALNVIAC EGADRVDRPE TYKQWQVRGH RAGLRQVPLS PAVVKLVRDK VKTLYHKDFL IDVDNRWLLQ GWKGRVLYAM STWVAADHDY SKF
101: VASSTFSSDS ATGRSASSCS DSATNTGKST CSFHSTTNTA HSTSCSSSPG GLAPANPTWP YDRIYLSQPL HSPPYNANNL FFSGVGTPTA GYFGHTPALS
201: KGNNDYFLAP AGQNGRSTGM QSFAALSNSS AAKDAKTLSN NGGSCRGGPC TPASAFFNGQ TDGDVDMLNM AFRKGMEEAN KFLPTTNTLD AISNKPVLRD
301: LTGDQLKKEE VDRLRMSMFS NGRGRKNRHG AEDLEAEVGR RSKLMMPEQE DTGVGEMVEE IMLHGHEIIM KGIEDLHIAM DTEAEKNHRK GASKAARGRR
401: GASEVVDLRT MLIHCAQAVA TGDRRGSNEL LKQIKQHSSA KGDATQRLAY CFAEGLEARL AGTGSHVYQS LMAKSTSVGE FLRAYKLYMA ASSFRKVNFI
501: FVGKIIMDAM VGKSRLHIVD YNVQYGFQWP GLLQMLAERE GGPPDVRITG IDLPQPGFRP AFQIEETGRR LSKCAREFGV PFKYHGIPAK FETVHAEDLN
601: IDPDEVLIVT SQSGFSNLMD ESVIMDRQDI PSPRDMVLSN IRKMRPDVFI DCVVNGTYGA PFFVTRFREA LFSYSAQFDM LDATIPRDND DRLLIERDIF
701: GPCALNVIAC EGADRVDRPE TYKQWQVRGH RAGLRQVPLS PAVVKLVRDK VKTLYHKDFL IDVDNRWLLQ GWKGRVLYAM STWVAADHDY SKF
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.