Factsheet for HORVU1Hr1G004440.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G031000.1	Wheat	cytosol	83.31	82.62
Zm00001d035670_P001	Maize	cytosol	53.69	53.17
EES18880	Sorghum	cytosol	54.24	52.63
EES18882	Sorghum	cytosol	52.71	51.71
HORVU3Hr1G012520.1	Barley	cytosol	31.99	50.44
Solyc04g011630.1.1	Tomato	cytosol	11.82	50.0
VIT_06s0004g04990.t01	Wine grape	cytosol	27.82	45.25
GSMUA_Achr8P02550_001	Banana	nucleus	23.92	43.88
HORVU3Hr1G012550.6	Barley	cytosol	35.05	42.28
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.22	41.32
CDX68389	Canola	cytosol	4.87	41.18
CDX80265	Canola	endoplasmic reticulum, golgi	18.08	41.01
PGSC0003DMT400005480	Potato	cytosol	26.98	39.84
GSMUA_Achr6P34090_001	Banana	nucleus	33.38	39.22
PGSC0003DMT400049420	Potato	cytosol	36.16	39.16
KRH24780	Soybean	cytosol	34.91	38.03
KRH10240	Soybean	cytosol	31.99	37.95
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	33.94	37.89
KRH29771	Soybean	cytosol	35.6	37.65
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	37.0	37.52
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	32.68	37.3
VIT_13s0019g01780.t01	Wine grape	nucleus	31.02	37.17
KRH23095	Soybean	cytosol	33.8	36.99
KRH65839	Soybean	cytosol, plastid	37.55	36.99
KRH49113	Soybean	cytosol	37.69	36.92
Solyc05g053090.1.1	Tomato	cytosol	38.11	36.88
CDY47877	Canola	nucleus	31.57	36.73
PGSC0003DMT400069949	Potato	cytosol	37.97	36.55
PGSC0003DMT400016258	Potato	cytosol	37.0	36.54
KRG99969	Soybean	cytosol	37.41	36.5
VIT_06s0004g04970.t01	Wine grape	cytosol	33.38	36.47
Bra028391.1-P	Field mustard	nucleus	31.43	36.45
KRH24773	Soybean	nucleus	34.77	36.39
VIT_13s0019g01810.t01	Wine grape	cytosol	37.83	36.36
CDY71578	Canola	nucleus, plastid	26.29	36.28
CDX79750	Canola	peroxisome	33.8	36.05
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	33.66	35.96
CDY07777	Canola	cytosol, nucleus, peroxisome	33.66	35.96
CDY39530	Canola	cytosol	30.88	35.86
HORVU5Hr1G045020.29	Barley	cytosol	38.94	35.58
VIT_13s0019g01710.t01	Wine grape	cytosol	35.88	35.49
KRH23094	Soybean	cytosol	27.26	35.44
Bra033813.1-P	Field mustard	nucleus	28.65	35.4
GSMUA_AchrUn_...	Banana	cytosol	32.41	35.36
KRH29773	Soybean	cytosol	30.18	35.34
KRH29774	Soybean	cytosol	31.02	35.34
PGSC0003DMT400022997	Potato	cytosol, plastid	37.27	35.22
Solyc10g086530.1.1	Tomato	cytosol	37.27	35.22
Solyc09g010920.1.1	Tomato	cytosol	37.13	35.09
CDX82987	Canola	nucleus	29.07	34.78
VIT_06s0004g04980.t01	Wine grape	nucleus	33.94	34.66
VIT_06s0004g04950.t01	Wine grape	cytosol	36.16	34.48
AT3G46600.1	Thale cress	cytosol	27.96	34.48
KRH24775	Soybean	cytosol	32.55	34.41
VIT_13s0019g01790.t01	Wine grape	cytosol	34.35	34.35
CDY33040	Canola	nucleus	28.51	34.34
AT5G59450.1	Thale cress	nucleus	28.93	34.1
KRH10243	Soybean	nucleus	31.43	33.98
KRH29779	Soybean	cytosol	35.05	33.96
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.46	33.9
KRH29775	Soybean	nucleus	31.71	33.88
Solyc06g082530.1.1	Tomato	cytosol	30.74	33.84
VIT_13s0019g01700.t01	Wine grape	cytosol	35.74	33.82
CDX86475	Canola	nucleus	33.38	33.8
CDY47878	Canola	nucleus	32.41	33.72
KRH23089	Soybean	cytosol	30.18	33.7
HORVU3Hr1G086210.1	Barley	cytosol, nucleus, plasma membrane	37.0	33.63
KRH24778	Soybean	nucleus	31.57	33.58
HORVU4Hr1G027520.2	Barley	cytosol, peroxisome	30.46	33.54
HORVU4Hr1G027610.1	Barley	cytosol	31.57	33.53
PGSC0003DMT400077972	Potato	cytosol	35.05	33.51
HORVU4Hr1G080460.5	Barley	cytosol	26.98	33.33
Solyc06g076280.1.1	Tomato	cytosol	34.63	33.29
AT2G37650.1	Thale cress	cytosol	33.24	33.29
Bra028390.1-P	Field mustard	cytosol	32.68	33.29
PGSC0003DMT400078286	Potato	nucleus	30.88	33.28
Bra015584.1-P	Field mustard	cytosol	20.17	33.26
CDX68388	Canola	cytosol	19.05	33.09
AT2G29060.1	Thale cress	cytosol	31.85	33.0
Solyc01g100200.2.1	Tomato	nucleus	30.46	32.88
HORVU4Hr1G027900.1	Barley	cytosol	30.18	32.78
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.66	32.57
KRH23090	Soybean	vacuole	28.09	32.53
CDY15616	Canola	nucleus	32.27	32.45
Bra030688.1-P	Field mustard	nucleus	33.52	32.44
KRH10241	Soybean	cytosol, nucleus, peroxisome	31.02	32.41
HORVU5Hr1G020900.1	Barley	cytosol	33.52	32.35
CDX77228	Canola	cytosol	30.18	32.29
CDY31749	Canola	cytosol	32.27	31.96
Bra035653.1-P	Field mustard	cytosol	31.99	31.86
CDY06266	Canola	cytosol	27.82	31.65
VIT_06s0004g04960.t01	Wine grape	nucleus	34.63	31.24
AT1G07530.1	Thale cress	cytosol	33.38	31.21
AT1G07520.3	Thale cress	cytosol	29.62	30.6
Bra031580.1-P	Field mustard	cytosol	29.35	30.58
CDY06265	Canola	cytosol	29.35	30.58
Bra031581.1-P	Field mustard	cytosol	28.23	30.39
HORVU4Hr1G027920.1	Barley	peroxisome	32.96	29.89
CDY09912	Canola	cytosol	29.07	29.86
HORVU4Hr1G027480.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	29.07	29.56
CDY09911	Canola	nucleus	22.25	27.4
HORVU2Hr1G036280.1	Barley	cytosol	19.47	25.13
HORVU4Hr1G071670.1	Barley	cytosol	18.5	24.81
HORVU2Hr1G043780.1	Barley	cytosol	18.5	23.33
HORVU3Hr1G091250.1	Barley	cytosol	17.66	23.01
HORVU5Hr1G099160.1	Barley	plastid	19.19	21.9
HORVU2Hr1G094040.2	Barley	cytosol, plastid	7.79	14.55

Protein Annotations

EnsemblPlants:HORVU1Hr1G004440.1	EnsemblPlantsGene:HORVU1Hr1G004440	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	ncoils:Coil
PANTHER:PTHR31636	PANTHER:PTHR31636:SF14	PFAM:PF03514	PFscan:PS50985	UniParc:UPI000B47B136	UniProt:A0A287EI59
MapMan:15.5.12	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:9163281..9166923

Molecular Weight (calculated)

81565.2 Da

IEP (calculated)

7.526

GRAVY (calculated)

-0.422

Length

719 amino acids

Sequence
(BLAST)

001: MAVGAFLGGL DYAVATDQPY DAASSCQQQL TMDSHDLSGP LFLTQPTTTG ASTYLHAAVT SPGLCNVNSS LQTAAGGSPE HRPIRSNDAL HYISQMLMED
101: VDETTFGACQ GEDALQAAEK PFRDILGPVY PPSTNWPQLH SNNETGNSDK SWTSRYKRLW STSFGNDYSS YSMLQPITNP STLSLQKRSL ISVGPTSRSG
201: FPALHHQRGV EEAMMVAPSI DKLVIYLEND ILFVSKLTTK AKVGERSENT TFEVADPRDW DILEGRSNKH LAFTTCAIIR NDNFDQVLLC YGQKSFEKIT
301: RLRRGMVEEG NKNSLKSRSK GRQKLWQRKQ PRRELVDLKT LLINCAQAVA EDNHLLASKL LKKIREHSSA DGDCTQRLAF YLVDGLEARL AGIGGQVYCN
401: LMERQTSTTD WFDAYSLFLA SCPFDRTSYY FANQAILDIS QRKPRVHIVD FGIGFGFQWP LMIQKFALQE EGAPKLRITG IDVPQPGFRP CEMIEETGKR
501: LADYANMFKV PFQYQGIAAS RWETIKIEDL NIDEGEVLII NCMFRMKNLG HETEAINSTR DKVLKTMRRM NPKIFISGTV NGLRSSPFFI QRFKEVMIHY
601: SSMFDMLDAN VVPRDNKARK TIERMIFGRD ALNIIACEGA ERTERPESYR QWHTRCLKAG FQQLPVDPDV LRIIVHMKNK FWHEEFFAVE DSGWLLQGWK
701: GRVLYAISKW QPNESYDDQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.