Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15616 | Canola | nucleus | 91.83 | 91.19 |
| AT1G07530.1 | Thale cress | cytosol | 83.1 | 76.72 |
| CDY71578 | Canola | nucleus, plastid | 49.44 | 67.37 |
| CDY47878 | Canola | nucleus | 64.23 | 65.99 |
| CDY31749 | Canola | cytosol | 60.0 | 58.68 |
| CDX77228 | Canola | cytosol | 55.07 | 58.18 |
| KRH24780 | Soybean | cytosol | 51.97 | 55.91 |
| KRH29779 | Soybean | cytosol | 53.1 | 50.81 |
| GSMUA_Achr10P... | Banana | nucleus | 31.55 | 50.68 |
| CDX68389 | Canola | cytosol | 6.06 | 50.59 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 53.24 | 50.13 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 22.11 | 49.53 |
| GSMUA_Achr10P... | Banana | cytosol | 40.28 | 47.75 |
| KRH23089 | Soybean | cytosol | 42.54 | 46.89 |
| CDY39530 | Canola | cytosol | 40.28 | 46.2 |
| CDY47877 | Canola | nucleus | 40.0 | 45.95 |
| KRH10243 | Soybean | nucleus | 42.82 | 45.71 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 25.07 | 45.41 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 50.85 | 45.29 |
| CDY06266 | Canola | cytosol | 39.44 | 44.3 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 36.9 | 43.81 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 25.35 | 43.58 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 39.01 | 43.55 |
| KRH23090 | Soybean | vacuole | 38.03 | 43.48 |
| Zm00001d034664_P001 | Maize | plastid | 34.23 | 43.47 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 27.89 | 43.42 |
| CDX79750 | Canola | peroxisome | 39.86 | 41.99 |
| KXG38103 | Sorghum | cytosol | 36.9 | 41.85 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 36.06 | 41.83 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 39.58 | 41.75 |
| CDY06265 | Canola | cytosol | 40.28 | 41.45 |
| CDX82987 | Canola | nucleus | 35.07 | 41.43 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 37.32 | 41.15 |
| OQU92829 | Sorghum | cytosol | 42.25 | 40.87 |
| CDY33040 | Canola | nucleus | 34.37 | 40.87 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 37.75 | 40.79 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 37.75 | 40.79 |
| KXG21079 | Sorghum | cytosol | 35.77 | 40.77 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 37.61 | 40.76 |
| Os03t0690600-03 | Rice | cytosol | 41.83 | 40.63 |
| Zm00001d028603_P001 | Maize | cytosol | 41.97 | 40.6 |
| Zm00001d011070_P001 | Maize | cytosol | 35.77 | 40.51 |
| CDY09912 | Canola | cytosol | 39.58 | 40.14 |
| KXG37250 | Sorghum | cytosol | 36.76 | 40.09 |
| KXG21080 | Sorghum | cytosol | 35.21 | 39.94 |
| Zm00001d035671_P001 | Maize | cytosol | 34.93 | 39.62 |
| CDY09911 | Canola | nucleus | 31.97 | 38.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.93 | 37.63 |
| CDX68388 | Canola | cytosol | 21.83 | 37.44 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 40.14 | 36.73 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 40.0 | 36.69 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 39.86 | 36.47 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 30.42 | 36.24 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 40.14 | 36.21 |
| Zm00001d047813_P002 | Maize | nucleus | 41.55 | 35.59 |
| Zm00001d035670_P001 | Maize | cytosol | 35.49 | 34.71 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 34.23 | 34.52 |
| EES18882 | Sorghum | cytosol | 35.49 | 34.38 |
| OQU91407 | Sorghum | nucleus | 32.39 | 33.53 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 33.8 | 33.38 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 32.39 | 33.33 |
| EER91260 | Sorghum | nucleus | 33.66 | 33.15 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 32.96 | 33.14 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 33.24 | 33.1 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 33.38 | 32.87 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 33.52 | 32.83 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 33.38 | 32.83 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 33.38 | 32.83 |
| EES18880 | Sorghum | cytosol | 34.23 | 32.79 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 32.25 | 32.67 |
| KXG38064 | Sorghum | nucleus | 32.96 | 32.5 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 32.68 | 32.4 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 32.54 | 32.31 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 33.1 | 32.24 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 32.82 | 32.23 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 30.56 | 32.1 |
| Zm00001d033166_P001 | Maize | nucleus | 32.96 | 31.97 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 32.54 | 31.73 |
| CDY07309 | Canola | cytosol | 10.7 | 31.67 |
| OQU91406 | Sorghum | nucleus | 33.24 | 31.55 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 31.69 | 31.21 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 32.25 | 30.25 |
| CDY71156 | Canola | cytosol, plastid | 16.48 | 30.0 |
| CDY00883 | Canola | cytosol | 16.9 | 29.63 |
| CDY22807 | Canola | nucleus | 16.76 | 28.33 |
| CDY37124 | Canola | nucleus | 16.62 | 28.1 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 19.15 | 27.36 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 18.87 | 26.96 |
| CDY19966 | Canola | cytosol | 18.73 | 26.92 |
| CDY71174 | Canola | cytosol, plastid | 18.73 | 26.76 |
| CDY05700 | Canola | cytosol, plastid | 18.59 | 26.56 |
| CDY35589 | Canola | cytosol | 19.86 | 26.55 |
| CDY42968 | Canola | cytosol | 20.0 | 26.54 |
| CDY00074 | Canola | cytosol, plastid | 18.45 | 26.36 |
| CDY58168 | Canola | plastid | 19.58 | 26.23 |
| CDY50128 | Canola | cytosol, plastid | 19.44 | 25.89 |
| CDY61060 | Canola | cytosol | 18.03 | 23.75 |
| CDY00377 | Canola | cytosol | 18.31 | 23.64 |
| CDY68224 | Canola | cytosol | 18.87 | 23.26 |
| CDY27821 | Canola | cytosol | 14.51 | 23.2 |
| CDY50240 | Canola | cytosol | 18.73 | 23.09 |
| CDY00533 | Canola | cytosol | 14.23 | 22.65 |
| CDY27063 | Canola | cytosol, plastid | 16.9 | 20.83 |
| CDX91655 | Canola | cytosol | 15.92 | 19.22 |
Protein Annotations
| EnsemblPlants:CDX86475 | EnsemblPlantsGene:GSBRNA2T00145066001 | GO:A0A078DB44 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF132 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDX86475 | ProteinID:CDX86475.1 | SEG:seg |
| UniParc:UPI0004EE227D | MapMan:15.5.12 | : | : | : | : |
Description
BnaC08g02280D
Coordinates
chrLK031846:+:16829..19489
Molecular Weight (calculated)
79776.6 Da
IEP (calculated)
5.501
GRAVY (calculated)
-0.536
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYSGGSLD GFDFTSEFDN LPASNQTVDL SDGFYLDDPL LNFVSFDHSS APPPEPYPQK ENSNNNNAAA ETASGDRLSS PSDDSEFSDS VLKYISQVLM
101: EEDMEEKPCM FHDALALQAA EKSLYEALGE QYPSSMDHGA SYPEKPSWLQ TPFPSNFVFQ STSRSTSGGN SASFGSSMFK DSELAMQFKR GVDEASKFLP
201: KSSQLFIDVE SYVPKNSGFD ENTSEVFVKT EKKDEAEHPP PPPSNSRLTG KKKSHWRDED EDLAEERSNK QSAVYVEETE LSEMFDKILL CGGTGQPVCI
301: TDQKFPTEAK ARGKKSTATT TNSNSKGSKK ETADLRTLLI LCAQAVSVDD RRTANEMLRQ IREHSSPLGN GSERLAHYFA NSLEARLAGT GTQIYTALSS
401: KKTSAADMLK AYQTYISVCP FKKAAIIFAN HSIMRLTANA DTIHIVDFGI SYGFQWPALI HRLSFRPGGP PKLRITGIEL PQRGFRPAEG VHETGHRLAR
501: YCQRYKVPFE YNAIAQKWET IRVEDLKIEQ GEFVVVNSLF RFKNLLDETV VVNSPRDAVL KLIRKANPSV FIQAVLSGSY NAPFFVTRFR EALFHYSALF
601: DMCDSKLARE DEMRLMFEKE FYGREIMNVV ACEGTERVER PETYKQWQAR VIRAGFKQLP LEKELMQNLK LKIENGYDKN FDIDQDGNWL LQGWKGRIVY
701: ASSVWVPSSS
101: EEDMEEKPCM FHDALALQAA EKSLYEALGE QYPSSMDHGA SYPEKPSWLQ TPFPSNFVFQ STSRSTSGGN SASFGSSMFK DSELAMQFKR GVDEASKFLP
201: KSSQLFIDVE SYVPKNSGFD ENTSEVFVKT EKKDEAEHPP PPPSNSRLTG KKKSHWRDED EDLAEERSNK QSAVYVEETE LSEMFDKILL CGGTGQPVCI
301: TDQKFPTEAK ARGKKSTATT TNSNSKGSKK ETADLRTLLI LCAQAVSVDD RRTANEMLRQ IREHSSPLGN GSERLAHYFA NSLEARLAGT GTQIYTALSS
401: KKTSAADMLK AYQTYISVCP FKKAAIIFAN HSIMRLTANA DTIHIVDFGI SYGFQWPALI HRLSFRPGGP PKLRITGIEL PQRGFRPAEG VHETGHRLAR
501: YCQRYKVPFE YNAIAQKWET IRVEDLKIEQ GEFVVVNSLF RFKNLLDETV VVNSPRDAVL KLIRKANPSV FIQAVLSGSY NAPFFVTRFR EALFHYSALF
601: DMCDSKLARE DEMRLMFEKE FYGREIMNVV ACEGTERVER PETYKQWQAR VIRAGFKQLP LEKELMQNLK LKIENGYDKN FDIDQDGNWL LQGWKGRIVY
701: ASSVWVPSSS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.