Factsheet for GSMUA_Achr10P02440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P15080_001	Banana	cytosol	67.95	68.06
GSMUA_Achr10P...	Banana	nucleus	49.25	66.74
Solyc04g011630.1.1	Tomato	cytosol	17.2	60.59
GSMUA_Achr8P02550_001	Banana	nucleus	37.73	57.65
Os03t0690600-03	Rice	cytosol	65.44	53.63
Zm00001d028603_P001	Maize	cytosol	65.28	53.27
OQU92829	Sorghum	cytosol	64.94	53.0
GSMUA_Achr6P34090_001	Banana	nucleus	52.42	51.31
GSMUA_AchrUn_...	Banana	cytosol	55.09	50.08
TraesCS5D01G152700.1	Wheat	cytosol, plastid	62.77	48.58
TraesCS5A01G139000.1	Wheat	cytosol, plastid	62.77	48.45
TraesCS5B01G138100.1	Wheat	cytosol, plastid	62.77	48.45
CDX68389	Canola	cytosol	6.84	48.24
HORVU5Hr1G045020.29	Barley	cytosol	63.11	48.03
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	56.76	47.95
VIT_06s0004g04990.t01	Wine grape	cytosol	35.06	47.51
GSMUA_Achr5P08320_001	Banana	cytosol	35.23	46.99
Zm00001d047813_P002	Maize	nucleus	63.94	46.2
PGSC0003DMT400049420	Potato	cytosol	51.09	46.08
PGSC0003DMT400005480	Potato	cytosol	35.73	43.94
PGSC0003DMT400016258	Potato	cytosol	53.09	43.68
KRH65839	Soybean	cytosol, plastid	52.92	43.42
KRH29773	Soybean	cytosol	43.57	42.51
Solyc10g086530.1.1	Tomato	cytosol	53.76	42.31
VIT_13s0019g01700.t01	Wine grape	cytosol	53.59	42.24
VIT_13s0019g01810.t01	Wine grape	cytosol	52.59	42.11
Solyc09g010920.1.1	Tomato	cytosol	53.42	42.05
KRH24780	Soybean	cytosol	46.24	41.97
PGSC0003DMT400022997	Potato	cytosol, plastid	53.26	41.92
PGSC0003DMT400069949	Potato	cytosol	52.09	41.77
Solyc05g053090.1.1	Tomato	cytosol	51.75	41.72
KRH49113	Soybean	cytosol	51.09	41.69
KRG99969	Soybean	cytosol	51.25	41.66
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	22.04	41.64
VIT_13s0019g01790.t01	Wine grape	cytosol	49.92	41.59
VIT_13s0019g01780.t01	Wine grape	nucleus	41.57	41.5
VIT_13s0019g01710.t01	Wine grape	cytosol	49.92	41.13
KRH10240	Soybean	cytosol	41.57	41.09
KRH23094	Soybean	cytosol	37.9	41.05
CDX80265	Canola	endoplasmic reticulum, golgi	21.7	41.01
KRH29771	Soybean	cytosol	46.24	40.74
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	45.74	40.71
CDX79750	Canola	peroxisome	45.74	40.65
CDY07777	Canola	cytosol, nucleus, peroxisome	45.58	40.56
CDY71578	Canola	nucleus, plastid	35.23	40.5
CDX86475	Canola	nucleus	47.75	40.28
KRH24773	Soybean	nucleus	45.91	40.03
KRH29774	Soybean	cytosol	42.07	39.94
VIT_06s0004g04950.t01	Wine grape	cytosol	50.25	39.92
KRH23095	Soybean	cytosol	43.74	39.88
VIT_06s0004g04980.t01	Wine grape	nucleus	46.58	39.63
KRH29779	Soybean	cytosol	48.91	39.49
Solyc06g076280.1.1	Tomato	cytosol	49.25	39.44
PGSC0003DMT400077972	Potato	cytosol	49.42	39.36
AT2G37650.1	Thale cress	cytosol	46.74	39.0
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	40.73	38.73
KRH24775	Soybean	cytosol	43.91	38.68
KRH29775	Soybean	nucleus	43.24	38.48
CDY39530	Canola	cytosol	39.73	38.45
CDY47877	Canola	nucleus	39.57	38.35
AT3G46600.1	Thale cress	cytosol	37.06	38.08
Bra028391.1-P	Field mustard	nucleus	39.4	38.06
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	40.9	37.93
KRH24778	Soybean	nucleus	42.74	37.87
Bra015584.1-P	Field mustard	cytosol	27.55	37.84
Bra030688.1-P	Field mustard	nucleus	46.91	37.82
VIT_06s0004g04970.t01	Wine grape	cytosol	41.4	37.69
CDY47878	Canola	nucleus	43.41	37.63
CDY15616	Canola	nucleus	44.91	37.62
Bra028390.1-P	Field mustard	cytosol	43.91	37.25
KRH10243	Soybean	nucleus	40.57	36.54
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	45.08	36.34
AT1G07530.1	Thale cress	cytosol	46.58	36.28
Solyc01g100200.2.1	Tomato	nucleus	40.23	36.19
Bra033813.1-P	Field mustard	nucleus	35.06	36.08
AT2G29060.1	Thale cress	cytosol	41.74	36.02
KRH23089	Soybean	cytosol	38.56	35.87
VIT_06s0004g04960.t01	Wine grape	nucleus	47.58	35.76
KRH10241	Soybean	cytosol, nucleus, peroxisome	40.9	35.61
Bra035653.1-P	Field mustard	cytosol	42.74	35.46
CDY31749	Canola	cytosol	42.9	35.4
CDX82987	Canola	nucleus	35.39	35.27
KRH23090	Soybean	vacuole	36.56	35.27
CDY06266	Canola	cytosol	37.06	35.13
AT5G59450.1	Thale cress	nucleus	35.73	35.08
CDX77228	Canola	cytosol	39.23	34.97
Solyc06g082530.1.1	Tomato	cytosol	38.06	34.92
CDY33040	Canola	nucleus	34.72	34.84
PGSC0003DMT400078286	Potato	nucleus	38.23	34.33
Bra031581.1-P	Field mustard	cytosol	37.9	33.98
AT1G07520.3	Thale cress	cytosol	39.4	33.91
CDY06265	Canola	cytosol	38.06	33.04
Bra031580.1-P	Field mustard	cytosol	37.9	32.9
CDY09912	Canola	cytosol	37.9	32.43
CDY09911	Canola	nucleus	30.72	31.51
CDX68388	Canola	cytosol	21.7	31.4
GSMUA_Achr8P03610_001	Banana	cytosol	6.51	27.08
GSMUA_Achr6P11780_001	Banana	cytosol	15.03	26.32
GSMUA_Achr4P07010_001	Banana	cytosol	14.19	25.91
GSMUA_Achr4P11050_001	Banana	nucleus	15.69	23.68
GSMUA_AchrUn_...	Banana	nucleus	16.03	22.43
GSMUA_Achr10P...	Banana	cytosol	19.2	20.83
GSMUA_Achr6P24310_001	Banana	cytosol	17.7	19.81
GSMUA_Achr3P02410_001	Banana	nucleus	19.03	19.42
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	16.86	17.29
GSMUA_AchrUn_...	Banana	plastid	16.86	17.27
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	15.36	16.37
GSMUA_Achr1P03650_001	Banana	mitochondrion	15.53	16.32
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	14.02	16.15
GSMUA_Achr9P18770_001	Banana	cytosol	14.86	15.64
GSMUA_Achr4P24960_001	Banana	cytosol	11.69	14.43
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	12.69	13.04

Protein Annotations

MapMan:15.5.12	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G02440_001	EnsemblPlants:GSMUA_Achr10P02440_001	EnsemblPlants:GSMUA_Achr10T02440_001	InterPro:IPR005202
UniProt:M0RES1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF44	InterPro:TF_GRAS
UniParc:UPI0002951CFA	SEG:seg	:	:	:	:

Description

Putative Scarecrow-like protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr10G02440_001]

Coordinates

chr10:+:7180242..7183113

Molecular Weight (calculated)

67376.9 Da

IEP (calculated)

6.407

GRAVY (calculated)

-0.404

Length

599 amino acids

Sequence
(BLAST)

001: MVMDSGLHEL FGMMSGLSYD DSHSEQNIFR ALGLGEPQPH LGHSNYAVLP QMSSTTNTSS NPTSTVSTST EGEGLEDGDI FYSDMALRYI SRMLMEEDID
101: EKVSTYKEEL ALRAAEKPFY DILGQKYPPS LGGSSSSSST EEPLANIVVS PSLFIGGMPA WHFKRGVEEA RKFLPSNDKL VINLESNDLS SSREPRSRKN
201: PNSEDLDLAE GRSNKQSAVF GEGELRSEMF DMVLLCQGDK CTQKIFDLRE AMQNIASKND QNGPAKVASS GKARGKKQTK KEVVDLRTLL ILCSQAVAAD
301: DRRTANELLK QIRQHSSRDG DGSQRLASFF ADGLEARLAG TGSLIYHALV AKRTTATDIL KAYHLYLAAC PFKRVSHFFS NQTILNLSEK ASTVHIIDFG
401: IYFGFQWPCL IQRLSTREGG PPKLRITASK WETIRVEDLH IDKDEVVVVN CLYRFRNLVD ETVIVDSPRN RVLNTIRKMN PDVFIHGVVN GSYSAPFFVT
501: RFREALFHFS ALFDMLETNV PRDDEQRLLI ERDLFGREAL NVIACEGSER VERPETYKQW QVRSCYHKDF VIDEDSRWLI QGWKGRIIYA VSAWKPSGA

Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)

001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.