Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P07010_001 | Banana | cytosol | 68.75 | 30.18 |
| Solyc06g035620.2.1 | Tomato | cytosol | 68.06 | 30.06 |
| GSMUA_Achr9P12070_001 | Banana | mitochondrion, plastid | 90.97 | 25.19 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 64.58 | 23.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 68.75 | 23.13 |
| GSMUA_Achr6P11780_001 | Banana | cytosol | 54.86 | 23.1 |
| GSMUA_Achr6P24310_001 | Banana | cytosol | 83.33 | 22.43 |
| GSMUA_Achr9P24710_001 | Banana | endoplasmic reticulum, plastid | 90.28 | 22.3 |
| EER97346 | Sorghum | cytosol | 87.5 | 22.11 |
| HORVU2Hr1G043780.1 | Barley | cytosol | 87.5 | 22.11 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 87.5 | 22.11 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 86.81 | 21.93 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 86.11 | 21.75 |
| Os07t0545800-01 | Rice | cytosol, nucleus | 84.72 | 21.37 |
| KRH27129 | Soybean | plastid | 81.25 | 20.86 |
| KRH55599 | Soybean | plastid | 80.56 | 20.42 |
| KRH22210 | Soybean | cytosol, plastid | 81.25 | 20.28 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 86.81 | 20.26 |
| Solyc12g005340.1.1 | Tomato | cytosol | 77.78 | 20.07 |
| VIT_19s0014g04940.t01 | Wine grape | cytosol | 81.25 | 20.07 |
| PGSC0003DMT400056120 | Potato | cytosol | 77.08 | 19.86 |
| KRH25905 | Soybean | cytosol, plastid | 77.78 | 19.72 |
| Solyc07g063940.1.1 | Tomato | cytosol, nucleus, peroxisome | 78.47 | 19.38 |
| PGSC0003DMT400049492 | Potato | cytosol | 77.08 | 19.07 |
| GSMUA_Achr10P... | Banana | cytosol | 56.25 | 14.67 |
| GSMUA_Achr3P02410_001 | Banana | nucleus | 56.94 | 13.97 |
| GSMUA_Achr9P18770_001 | Banana | cytosol | 45.83 | 11.6 |
| GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 44.44 | 11.39 |
| GSMUA_AchrUn_... | Banana | plastid | 45.83 | 11.28 |
| GSMUA_Achr1P03650_001 | Banana | mitochondrion | 44.44 | 11.23 |
| GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 44.44 | 10.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.33 | 7.28 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 22.22 | 7.13 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 18.75 | 6.89 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 28.47 | 6.7 |
| GSMUA_Achr10P... | Banana | cytosol | 27.08 | 6.51 |
| GSMUA_Achr10P... | Banana | nucleus | 17.36 | 5.66 |
| GSMUA_Achr4P24960_001 | Banana | cytosol | 17.36 | 5.15 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 15.97 | 3.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P03610_001 | EnsemblPlants:GSMUA_Achr8T03610_001 | EnsemblPlantsGene:GSMUA_Achr8G03610_001 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF18 | PFAM:PF03514 | PFscan:PS50985 | UniParc:UPI0002961990 | UniProt:M0TMB3 |
| MapMan:15.5.12 | : | : | : | : | : |
Description
Chitin-inducible gibberellin-responsive protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G03610_001]
Coordinates
chr8:-:2471183..2472051
Molecular Weight (calculated)
16496.9 Da
IEP (calculated)
8.654
GRAVY (calculated)
-0.334
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKGLSPRVT TLVEQESNTN TTSFLTRFME TLEYYSAMLE SIDATLPRDS KERINVEQHC LAKDIVNIIA CEGKERVERH ELLGKWRSRL SMAGFKPYPL
101: SSYVNSVIKT LLGYYSDKYT LVEKDGAMLL GWKNRNLISA SAWH
101: SSYVNSVIKT LLGYYSDKYT LVEKDGAMLL GWKNRNLISA SAWH
001: MDNVRGSIML QPLPEIAESI DDAICHELSM WPDDAKDLLL IVEAISRGDL KLVLVACAKA VSENNLLMAR WCMGELRGMV SISGEPIQRL GAYMLEGLVA
101: RLAASGSSIY KSLQSREPES YEFLSYVYVL HEVCPYFKFG YMSANGAIAE AMKDEERIHI IDFQIGQGSQ WIALIQAFAA RPGGAPNIRI TGVGDGSVLV
201: TVKKRLEKLA KKFDVPFRFN AVSRPSCEVE VENLDVRDGE ALGVNFAYML HHLPDESVSM ENHRDRLLRM VKSLSPKVVT LVEQECNTNT SPFLPRFLET
301: LSYYTAMFES IDVMLPRNHK ERINIEQHCM ARDVVNIIAC EGAERIERHE LLGKWKSRFS MAGFEPYPLS SIISATIRAL LRDYSNGYAI EERDGALYLG
401: WMDRILVSSC AWK
101: RLAASGSSIY KSLQSREPES YEFLSYVYVL HEVCPYFKFG YMSANGAIAE AMKDEERIHI IDFQIGQGSQ WIALIQAFAA RPGGAPNIRI TGVGDGSVLV
201: TVKKRLEKLA KKFDVPFRFN AVSRPSCEVE VENLDVRDGE ALGVNFAYML HHLPDESVSM ENHRDRLLRM VKSLSPKVVT LVEQECNTNT SPFLPRFLET
301: LSYYTAMFES IDVMLPRNHK ERINIEQHCM ARDVVNIIAC EGAERIERHE LLGKWKSRFS MAGFEPYPLS SIISATIRAL LRDYSNGYAI EERDGALYLG
401: WMDRILVSSC AWK
Arabidopsis Description
SCL21SCL21 [Source:UniProtKB/TrEMBL;Acc:A0A178VWV4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.