Factsheet for GSMUA_Achr6P34090_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g011630.1.1	Tomato	cytosol	19.12	68.82
GSMUA_Achr8P02550_001	Banana	nucleus	43.14	67.35
GSMUA_AchrUn_...	Banana	cytosol	63.24	58.73
GSMUA_Achr10P...	Banana	nucleus	41.5	57.47
CDX68389	Canola	cytosol	7.68	55.29
GSMUA_Achr5P08320_001	Banana	cytosol	39.38	53.67
GSMUA_Achr10P...	Banana	cytosol	51.31	52.42
GSMUA_Achr7P15080_001	Banana	cytosol	45.26	46.32
VIT_06s0004g04990.t01	Wine grape	cytosol	32.84	45.48
TraesCS1B01G037500.1	Wheat	cytosol	30.07	44.55
PGSC0003DMT400049420	Potato	cytosol	48.04	44.28
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	50.98	44.01
PGSC0003DMT400016258	Potato	cytosol	49.84	41.9
KRH65839	Soybean	cytosol, plastid	49.51	41.51
KRG99969	Soybean	cytosol	49.84	41.38
PGSC0003DMT400005480	Potato	cytosol	32.84	41.27
KRH29773	Soybean	cytosol	41.34	41.21
KRH49113	Soybean	cytosol	49.18	41.01
HORVU3Hr1G012520.1	Barley	cytosol	30.39	40.79
Solyc10g086530.1.1	Tomato	cytosol	50.33	40.47
PGSC0003DMT400022997	Potato	cytosol, plastid	50.0	40.21
Zm00001d011070_P001	Maize	cytosol	41.18	40.19
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	20.75	40.06
CDX80265	Canola	endoplasmic reticulum, golgi	20.75	40.06
Solyc09g010920.1.1	Tomato	cytosol	49.67	39.95
Bra015584.1-P	Field mustard	cytosol	28.43	39.91
VIT_13s0019g01780.t01	Wine grape	nucleus	39.05	39.83
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	43.79	39.82
CDX79750	Canola	peroxisome	43.79	39.76
KXG21080	Sorghum	cytosol	40.52	39.62
CDY07777	Canola	cytosol, nucleus, peroxisome	43.46	39.52
KXG38103	Sorghum	cytosol	40.36	39.46
KRH24780	Soybean	cytosol	42.32	39.24
PGSC0003DMT400069949	Potato	cytosol	47.88	39.22
CDY71578	Canola	nucleus, plastid	33.33	39.16
KRH10240	Soybean	cytosol	38.24	38.61
VIT_13s0019g01790.t01	Wine grape	cytosol	45.1	38.39
Solyc05g053090.1.1	Tomato	cytosol	46.41	38.22
KXG21079	Sorghum	cytosol	38.89	38.2
KRH29774	Soybean	cytosol	39.38	38.19
VIT_06s0004g04980.t01	Wine grape	nucleus	43.79	38.07
KRH29775	Soybean	nucleus	41.83	38.04
VIT_13s0019g01700.t01	Wine grape	cytosol	47.22	38.03
AT2G37650.1	Thale cress	cytosol	44.44	37.88
Zm00001d035671_P001	Maize	cytosol	38.73	37.86
VIT_13s0019g01710.t01	Wine grape	cytosol	44.61	37.55
KRH24775	Soybean	cytosol	41.67	37.5
KRH29771	Soybean	cytosol	41.67	37.5
VIT_13s0019g01810.t01	Wine grape	cytosol	45.42	37.17
VIT_06s0004g04950.t01	Wine grape	cytosol	45.42	36.87
KRH24773	Soybean	nucleus	41.34	36.83
KRH29779	Soybean	cytosol	43.95	36.25
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	37.25	36.19
VIT_06s0004g04970.t01	Wine grape	cytosol	38.89	36.17
CDX86475	Canola	nucleus	41.83	36.06
AT2G29060.1	Thale cress	cytosol	40.85	36.02
KRH23095	Soybean	cytosol	38.56	35.92
CDY39530	Canola	cytosol	36.27	35.86
KRH23094	Soybean	cytosol	32.35	35.8
CDY47877	Canola	nucleus	36.11	35.76
Solyc06g076280.1.1	Tomato	cytosol	43.63	35.7
Bra028391.1-P	Field mustard	nucleus	36.11	35.65
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	37.58	35.6
AT3G46600.1	Thale cress	cytosol	33.82	35.51
PGSC0003DMT400077972	Potato	cytosol	43.63	35.51
CDY47878	Canola	nucleus	39.87	35.31
KRH24778	Soybean	nucleus	38.89	35.21
Solyc06g082530.1.1	Tomato	cytosol	37.42	35.07
KRH10243	Soybean	nucleus	38.07	35.04
TraesCS1B01G037300.1	Wheat	cytosol	40.2	34.94
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	42.32	34.86
KRH10241	Soybean	cytosol, nucleus, peroxisome	39.05	34.74
Bra028390.1-P	Field mustard	cytosol	40.03	34.7
PGSC0003DMT400078286	Potato	nucleus	37.75	34.63
Bra030688.1-P	Field mustard	nucleus	41.99	34.59
Solyc01g100200.2.1	Tomato	nucleus	37.42	34.38
KRH23089	Soybean	cytosol	36.11	34.32
Zm00001d035670_P001	Maize	cytosol	40.69	34.3
TraesCS1D01G030800.1	Wheat	cytosol	39.22	34.24
HORVU3Hr1G012550.6	Barley	cytosol	33.33	34.23
KRH23090	Soybean	vacuole	34.64	34.14
CDY15616	Canola	nucleus	39.87	34.13
Bra033813.1-P	Field mustard	nucleus	32.35	34.02
TraesCS1A01G030300.1	Wheat	cytosol	39.22	33.99
AT1G07530.1	Thale cress	cytosol	42.65	33.94
Bra035653.1-P	Field mustard	cytosol	40.03	33.93
TraesCS1B01G037400.1	Wheat	cytosol	40.03	33.89
CDY31749	Canola	cytosol	40.2	33.88
VIT_06s0004g04960.t01	Wine grape	nucleus	44.12	33.88
CDY06266	Canola	cytosol	34.64	33.54
AT5G59450.1	Thale cress	nucleus	33.33	33.44
EES18882	Sorghum	cytosol	40.03	33.42
TraesCS1D01G030900.1	Wheat	cytosol	38.89	33.38
HORVU1Hr1G004440.1	Barley	cytosol	39.22	33.38
CDY33040	Canola	nucleus	32.35	33.17
CDX82987	Canola	nucleus	32.52	33.11
TraesCS1D01G031000.1	Wheat	cytosol	39.22	33.1
CDX77228	Canola	cytosol	36.27	33.04
TraesCS1A01G030200.1	Wheat	cytosol	38.89	33.01
TraesCS1D01G031200.1	Wheat	cytosol	39.05	32.78
EES18880	Sorghum	cytosol	39.38	32.52
OQU91407	Sorghum	nucleus	36.44	32.51
Bra031581.1-P	Field mustard	cytosol	35.13	32.19
EER91260	Sorghum	nucleus	37.75	32.04
TraesCS3D01G067900.1	Wheat	nucleus	36.11	32.03
AT1G07520.3	Thale cress	cytosol	36.27	31.9
Zm00001d033166_P001	Maize	nucleus	37.91	31.69
CDY09912	Canola	cytosol	36.11	31.57
CDY09911	Canola	nucleus	30.07	31.51
KXG38064	Sorghum	nucleus	36.93	31.39
Bra031580.1-P	Field mustard	cytosol	35.29	31.3
CDY06265	Canola	cytosol	35.29	31.3
TraesCS3A01G068000.1	Wheat	nucleus	36.11	30.87
TraesCS3B01G081100.1	Wheat	nucleus	35.78	30.63
TraesCS3D01G067700.1	Wheat	cytosol	35.95	30.47
TraesCS1B01G037200.1	Wheat	nucleus	37.58	30.38
OQU91406	Sorghum	nucleus	36.6	29.95
TraesCS3B01G081000.1	Wheat	cytosol	35.46	29.81
TraesCS3B01G080900.1	Wheat	nucleus	34.97	29.68
TraesCS3A01G067900.1	Wheat	cytosol	34.64	29.36
TraesCS3D01G067800.1	Wheat	nucleus	31.54	28.55
GSMUA_Achr8P03610_001	Banana	cytosol	6.7	28.47
GSMUA_Achr4P07010_001	Banana	cytosol	14.87	27.74
CDX68388	Canola	cytosol	18.63	27.54
GSMUA_Achr6P11780_001	Banana	cytosol	14.38	25.73
GSMUA_Achr4P11050_001	Banana	nucleus	16.67	25.69
GSMUA_AchrUn_...	Banana	nucleus	16.99	24.3
GSMUA_Achr10P...	Banana	cytosol	18.79	20.83
GSMUA_Achr6P24310_001	Banana	cytosol	17.48	20.0
GSMUA_Achr3P02410_001	Banana	nucleus	18.14	18.91
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	16.18	17.62
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	16.67	17.47
GSMUA_Achr1P03650_001	Banana	mitochondrion	16.18	17.37
GSMUA_AchrUn_...	Banana	plastid	16.5	17.27
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	14.22	16.73
GSMUA_Achr9P18770_001	Banana	cytosol	15.03	16.17
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	13.73	14.41
GSMUA_Achr4P24960_001	Banana	cytosol	10.95	13.81

Protein Annotations

EnsemblPlants:GSMUA_Achr6P34090_001	EnsemblPlants:GSMUA_Achr6T34090_001	EnsemblPlantsGene:GSMUA_Achr6G34090_001	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF131	PFAM:PF03514	PFscan:PS50985	SEG:seg	UniParc:UPI0002950C33
UniProt:M0TCK2	MapMan:15.5.12	:	:	:	:

Description

Putative Scarecrow-like protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr6G34090_001]

Coordinates

chr6:-:32910508..32912676

Molecular Weight (calculated)

68927.6 Da

IEP (calculated)

6.187

GRAVY (calculated)

-0.575

Length

612 amino acids

Sequence
(BLAST)

001: MDDLFTEEDA LNSLDLGGQQ QSSNHRSSRL DLPDDHPGLP PSVCTPNANV SPVTETGTLD DSEIFSDIGL NYISQMLMEE NTDDKFDVYL ENPALFDPEN
101: TFLEILRENL TASPGQPPLC SSHFSDSPDG DHHGSSGSST VMDNSHSTLV APDLPADSQP AWQFQGGIEE AHKFLPSNDN EHAVHPSRGR KNRHGEDLEL
201: EEGRSIKQSA VFSGETGRTK LFDEVFLCSG GSCAKAVDKF RERSQNEASK VSHGSRSKGR KGRGKKQPKR EVVDLSSLLT HCAHAVAADD HRSANELLKQ
301: IRQHSSPFGD ANQRLAHWFA DGLQARLAGT GSQIYHSLTA KRIPVTDVLK AYQLYMAACP FRKVSHFFAT QTILNVAEKA TRHGFRPTEL IDETGRRLAD
401: YASNFRIPFE FRSIVAAKWD DIRVEDLDLR DDEVVVVNCL YRFKNLLDET VVVDNPRDKV LNTIRKINPD VFIHGVVNGT YSAPFFVTRF REALFHYSSL
501: FDMIGTNAPQ EDESRQLIEK VLFGREALNV LACEGTERLE RPETYKQWHV RNLRAGFVQL PLNRDIVKNV TDKMKSCYHK DFVVDEDKRW LLQGWKGRIV
601: YALSTWKSNS SY

Best Arabidopsis Sequence Match ( AT2G37650.2 )
(BLAST)

001: MVNRNRLSGL PDQPSSHSFT PVTLYDGFNY NLSSDHINTV VAAPENSVFI REEEEEEDPA DDFDFSDAVL GYISQMLNEE DMDDKVCMLQ ESLDLEAAER
101: SLYEAIGKKY PPSPERNLAF AERNSENLDR VVPGNYTGGD CIGFGNGGIK PLSSGFTLDF RNPQSCSSIL SVPQSNGLIT IYGDGIDESS KNNRENHQSV
201: WLFRREIEEA NRFNPEENEL IVNFREENCV SKARKNSSRD EICVEEERSS KLPAVFGEDI LRSDVVDKIL VHVPGGESMK EFNALRDVLK KGVEKKKASD
301: AQGGKRRARG RGRGRGRGGG GGQNGKKEVV DLRSLLIHCA QAVAADDRRC AGQLLKQIRL HSTPFGDGNQ RLAHCFANGL EARLAGTGSQ IYKGIVSKPR
401: SAAAVLKAHQ LFLACCPFRK LSYFITNKTI RDLVGNSQRV HVIDFGILYG FQWPTLIHRF SMYGSPKVRI TGIEFPQPGF RPAQRVEETG QRLAAYAKLF
501: GVPFEYKAIA KKWDAIQLED LDIDRDEITV VNCLYRAENL HDESVKVESC RDTVLNLIGK INPDLFVFGI VNGAYNAPFF VTRFREALFH FSSIFDMLET
601: IVPREDEERM FLEMEVFGRE ALNVIACEGW ERVERPETYK QWHVRAMRSG LVQVPFDPSI MKTSLHKVHT FYHKDFVIDQ DNRWLLQGWK GRTVMALSVW
701: KPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.