Factsheet for TraesCS1D01G030900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G037300.1	Wheat	cytosol	82.33	83.38
TraesCS1D01G030800.1	Wheat	cytosol	77.7	79.03
TraesCS1D01G031200.1	Wheat	cytosol	77.98	76.27
TraesCS1D01G031000.1	Wheat	cytosol	75.04	73.79
Zm00001d035670_P001	Maize	cytosol	53.58	52.62
EES18880	Sorghum	cytosol	54.14	52.09
EES18882	Sorghum	cytosol	51.89	50.48
Solyc04g011630.1.1	Tomato	cytosol	11.64	48.82
VIT_06s0004g04990.t01	Wine grape	cytosol	28.47	45.93
CDX68389	Canola	cytosol	5.19	43.53
GSMUA_Achr8P02550_001	Banana	nucleus	23.7	43.11
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.65	41.96
CDX80265	Canola	endoplasmic reticulum, golgi	18.51	41.64
TraesCS3D01G067900.1	Wheat	nucleus	39.69	41.01
PGSC0003DMT400005480	Potato	cytosol	27.21	39.84
GSMUA_Achr6P34090_001	Banana	nucleus	33.38	38.89
PGSC0003DMT400049420	Potato	cytosol	35.9	38.55
KRH10240	Soybean	cytosol	32.68	38.45
TraesCS3D01G067700.1	Wheat	cytosol	38.85	38.37
KRH24780	Soybean	cytosol	35.2	38.03
TraesCS3D01G067800.1	Wheat	nucleus	35.9	37.87
VIT_13s0019g01780.t01	Wine grape	nucleus	31.7	37.67
KRH23095	Soybean	cytosol	34.64	37.6
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	33.1	37.46
KRH29771	Soybean	cytosol	35.62	37.35
CDY71578	Canola	nucleus, plastid	27.21	37.24
KRH49113	Soybean	cytosol	38.29	37.19
KRH65839	Soybean	cytosol, plastid	38.01	37.12
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.89	37.09
PGSC0003DMT400016258	Potato	cytosol	37.87	37.09
VIT_06s0004g04970.t01	Wine grape	cytosol	34.22	37.08
Solyc05g053090.1.1	Tomato	cytosol	38.57	37.01
KRG99969	Soybean	cytosol	38.15	36.91
TraesCS5D01G494900.1	Wheat	cytosol	33.94	36.83
KRH29773	Soybean	cytosol	31.7	36.81
VIT_13s0019g01810.t01	Wine grape	cytosol	38.57	36.76
CDY47877	Canola	nucleus	31.7	36.57
PGSC0003DMT400069949	Potato	cytosol	38.29	36.55
CDX79750	Canola	peroxisome	34.36	36.35
TraesCS4D01G136100.1	Wheat	cytosol	29.73	36.3
Bra028391.1-P	Field mustard	nucleus	31.56	36.29
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	34.22	36.26
CDY07777	Canola	cytosol, nucleus, peroxisome	34.22	36.26
KRH24773	Soybean	nucleus	34.78	36.1
Bra033813.1-P	Field mustard	nucleus	29.45	36.08
VIT_13s0019g01710.t01	Wine grape	cytosol	36.61	35.9
CDY39530	Canola	cytosol	31.14	35.86
KRH29774	Soybean	cytosol	31.7	35.82
KRH23094	Soybean	cytosol	27.77	35.8
TraesCS5D01G152700.1	Wheat	cytosol, plastid	38.57	35.53
VIT_06s0004g04980.t01	Wine grape	nucleus	35.06	35.51
CDY33040	Canola	nucleus	29.73	35.51
AT3G46600.1	Thale cress	cytosol	29.03	35.51
Solyc09g010920.1.1	Tomato	cytosol	37.87	35.48
PGSC0003DMT400022997	Potato	cytosol, plastid	37.73	35.35
TraesCS4D01G136000.1	Wheat	cytosol	32.12	35.29
CDX82987	Canola	nucleus	29.73	35.27
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	31.84	35.14
Solyc06g082530.1.1	Tomato	cytosol	32.12	35.07
KRH29779	Soybean	cytosol	36.33	34.91
TraesCS5D01G092000.1	Wheat	cytosol	30.15	34.9
Solyc10g086530.1.1	Tomato	cytosol	37.03	34.69
VIT_06s0004g04950.t01	Wine grape	cytosol	36.61	34.62
TraesCS4D01G136200.1	Wheat	cytosol	29.45	34.54
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	35.76	34.32
KRH10241	Soybean	cytosol, nucleus, peroxisome	33.1	34.3
GSMUA_AchrUn_...	Banana	cytosol	31.7	34.29
KRH24775	Soybean	cytosol	32.68	34.26
Solyc01g100200.2.1	Tomato	nucleus	31.98	34.23
VIT_13s0019g01790.t01	Wine grape	cytosol	34.5	34.21
AT5G59450.1	Thale cress	nucleus	29.17	34.1
TraesCS7D01G174100.1	Wheat	cytosol	33.52	34.05
PGSC0003DMT400078286	Potato	nucleus	31.84	34.03
KRH10243	Soybean	nucleus	31.7	33.98
Bra015584.1-P	Field mustard	cytosol	20.76	33.95
KRH29775	Soybean	nucleus	31.98	33.88
TraesCS4D01G136300.1	Wheat	cytosol	31.98	33.83
KRH24778	Soybean	nucleus	31.98	33.73
KRH23089	Soybean	cytosol	30.43	33.7
CDX68388	Canola	cytosol	19.5	33.57
CDY47878	Canola	nucleus	32.54	33.57
PGSC0003DMT400077972	Potato	cytosol	35.34	33.51
TraesCS4D01G135900.1	Wheat	cytosol	29.87	33.39
VIT_13s0019g01700.t01	Wine grape	cytosol	35.48	33.29
AT2G37650.1	Thale cress	cytosol	33.52	33.29
CDX86475	Canola	nucleus	33.1	33.24
Solyc06g076280.1.1	Tomato	cytosol	34.78	33.16
Bra028390.1-P	Field mustard	cytosol	32.82	33.14
AT2G29060.1	Thale cress	cytosol	31.98	32.85
TraesCS3D01G354100.1	Wheat	cytosol, extracellular, nucleus	37.59	32.76
TraesCS7D01G174300.1	Wheat	cytosol	33.38	32.65
Bra030688.1-P	Field mustard	nucleus	33.8	32.44
TraesCS4D01G135500.1	Wheat	cytosol	29.31	32.35
CDY06266	Canola	cytosol	28.47	32.12
CDY15616	Canola	nucleus	31.84	31.75
TraesCS4D01G136400.1	Wheat	mitochondrion	31.7	31.74
TraesCS4D01G332000.1	Wheat	cytosol	30.01	31.7
KRH23090	Soybean	vacuole	27.35	31.4
CDX77228	Canola	cytosol	29.59	31.4
CDY31749	Canola	cytosol	31.7	31.13
VIT_06s0004g04960.t01	Wine grape	nucleus	34.78	31.12
AT1G07530.1	Thale cress	cytosol	33.52	31.08
Bra035653.1-P	Field mustard	cytosol	31.42	31.02
AT1G07520.3	Thale cress	cytosol	30.15	30.89
CDY06265	Canola	cytosol	29.73	30.72
Bra031581.1-P	Field mustard	cytosol	28.75	30.69
Bra031580.1-P	Field mustard	cytosol	29.59	30.58
CDY09912	Canola	cytosol	29.31	29.86
TraesCS4D01G136500.1	Wheat	peroxisome	31.7	29.47
CDY09911	Canola	nucleus	22.16	27.05
TraesCS4D01G266400.1	Wheat	cytosol	18.37	24.44
TraesCS5D01G419400.2	Wheat	cytosol	18.79	24.36
TraesCS2D01G198200.1	Wheat	cytosol	18.79	24.14
TraesCS3D01G403100.1	Wheat	cytosol	16.83	21.74
TraesCS2D01G220200.1	Wheat	cytosol	17.25	21.58
TraesCS2D01G393200.1	Wheat	cytosol	15.43	17.54

Protein Annotations

EnsemblPlants:TraesCS1D01G030900.1	EnsemblPlantsGene:TraesCS1D01G030900	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr1D:-:12054133..12058537

Molecular Weight (calculated)

80953.6 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.447

Length

713 amino acids

Sequence
(BLAST)

001: MAIEPLRVNL DAVPATDQPY HGDSSSQQQL TMHNYDVSGP HSTVLSPANQ ASANSSHGQN QFLIAAGGSP EHRQIRSNDA LHYISQMLME ENDERVDICQ
101: GEAALQAAEK PFRDILGEVC VPATNRPPLH SNSKPDNADK SGTSCYKRLW STSFSNDCSS YSLLQPLTTP LSPYICNSGL SLQKRPLTSV GPTSGFGFPA
201: LHCHGGVDEE NMFAPNIDKL EMYLEDGILY ISQLTMKAKV GERSKNAILE VANQRDIFQG RSNKHHAITT CAIIRSENFD RVLLCYGRKS FDLITRLQER
301: MAEEGNKNSQ KGRSKGCRKL WARKQPRKEL VDLRTLLVHC AQAVAQDNHL LASELLKKIR QHSSADGDCT QRLAFYLADG LEARFGGIGS HVYGNLMERR
401: TSAADWFEAY RLFIAACPFI RASYYFANQT ILDVSQRQPR VHIVDFGIDF GFQWPLMIQK LAQREEGAPK LRITGIEVPQ PGFHPCKMIE ETGKRLADYA
501: NMFKVPFQYQ GIAAARWETV KIEDLNIDED EVLIINCIFR MKNLGHETEA INSARDEVLK TMRRMNPKVL ISGTVNGLHS SPFFIQRFKE VMLHYSSMFD
601: MLDAIVPRDN EARKMIERIP FGRDALNIIA CEDAERTQRP ESYRQWQARF LKARFQQLPV DPAILKKIVH MKNLHYHEEF FAVEDCGWLL QGWKGRVLYA
701: VSKWEPNETY DDQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.