Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136100.1 | Wheat | cytosol | 78.78 | 82.02 |
| OQU84114 | Sorghum | mitochondrion | 38.16 | 48.43 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 48.19 | 45.15 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 48.36 | 43.62 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 45.56 | 42.88 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 44.9 | 42.79 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 50.66 | 42.25 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 42.6 | 42.05 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 48.03 | 41.6 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 47.37 | 40.45 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.28 | 39.64 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 43.59 | 39.26 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 46.05 | 36.51 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 37.99 | 35.16 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 38.82 | 30.49 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 40.79 | 30.32 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 34.54 | 29.45 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 33.39 | 28.96 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 32.4 | 28.55 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 33.72 | 28.28 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 32.73 | 27.3 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 32.24 | 27.15 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 29.44 | 26.48 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 22.37 | 24.73 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 21.55 | 24.44 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 21.55 | 23.6 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 21.22 | 23.37 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 20.89 | 22.28 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 19.24 | 18.66 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G136200.1 | EnsemblPlantsGene:TraesCS4D01G136200 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4D:-:122269373..122271199
Molecular Weight (calculated)
68659.7 Da
IEP (calculated)
6.164
GRAVY (calculated)
-0.374
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPFHSFQEE LCHYHCHCHH QGCHSRLPVF PDLPLMADDD SNCFAVQDHL ALPYITQILM EEEDDVDEDN PALLKAQRPF AQILSSSMHA STLMADQGGA
101: LALDVHSPSS PIFKFKGVDE VRSLLLLPDG DYSTHMFSTA FLRGMEEANK FLPTNCELTT TGGHDQPKEK SGRGRKDRHG EVEADVSRTS RLVEAGAGEV
201: FDQMLTAMGN ETGNSNKKGR KSKARVVDLH TLLIHCAKAV MDDRRSAGEL LKEIKQHASP TGDATQRLAY WFAEGLEARL TGTGSQVYGL LTAECTSTVR
301: HMQAYQLFMS TCCFRKVAFL FANKAIFNAA VGKSRLHIVD YGLHSGFQWP ELLRWLASRD GGPPEVRITH VELPQPGVYP EKHMEQIGNR LTDIAQELGV
401: PFKYRAIMAQ WQTICVEDLD MEPDEALAVN DQFNFRTLMD ESVVIASPNP RDAVLGNISK MKPDVFVQST VNGSYGTFFL SRFREALFYH SALFDMLDAT
501: MPRESKLRLA LERDVFGWMV LNAIAYEGED RVERGETYKH WQIRNQRAGL RQLPLNRETV KMARDMVMGE YHKDFDIDED HQWLLQGWKG RILYAHSTWV
601: AEGASSHC
101: LALDVHSPSS PIFKFKGVDE VRSLLLLPDG DYSTHMFSTA FLRGMEEANK FLPTNCELTT TGGHDQPKEK SGRGRKDRHG EVEADVSRTS RLVEAGAGEV
201: FDQMLTAMGN ETGNSNKKGR KSKARVVDLH TLLIHCAKAV MDDRRSAGEL LKEIKQHASP TGDATQRLAY WFAEGLEARL TGTGSQVYGL LTAECTSTVR
301: HMQAYQLFMS TCCFRKVAFL FANKAIFNAA VGKSRLHIVD YGLHSGFQWP ELLRWLASRD GGPPEVRITH VELPQPGVYP EKHMEQIGNR LTDIAQELGV
401: PFKYRAIMAQ WQTICVEDLD MEPDEALAVN DQFNFRTLMD ESVVIASPNP RDAVLGNISK MKPDVFVQST VNGSYGTFFL SRFREALFYH SALFDMLDAT
501: MPRESKLRLA LERDVFGWMV LNAIAYEGED RVERGETYKH WQIRNQRAGL RQLPLNRETV KMARDMVMGE YHKDFDIDED HQWLLQGWKG RILYAHSTWV
601: AEGASSHC
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.