Factsheet for TraesCS1D01G030800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G030300.1	Wheat	cytosol	90.01	89.38
TraesCS1B01G037400.1	Wheat	cytosol	89.73	87.0
TraesCS1D01G031200.1	Wheat	cytosol	81.03	77.92
TraesCS1D01G030900.1	Wheat	cytosol	79.03	77.7
TraesCS1D01G031000.1	Wheat	cytosol	75.61	73.1
Zm00001d035670_P001	Maize	cytosol	54.78	52.89
EES18880	Sorghum	cytosol	55.21	52.23
EES18882	Sorghum	cytosol	53.49	51.16
Solyc04g011630.1.1	Tomato	cytosol	12.13	50.0
VIT_06s0004g04990.t01	Wine grape	cytosol	28.39	45.02
CDX68389	Canola	cytosol	5.42	44.71
GSMUA_Achr8P02550_001	Banana	nucleus	24.68	44.13
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.54	41.01
CDX80265	Canola	endoplasmic reticulum, golgi	18.54	41.01
PGSC0003DMT400005480	Potato	cytosol	27.82	40.04
GSMUA_Achr6P34090_001	Banana	nucleus	34.24	39.22
TraesCS3D01G067900.1	Wheat	nucleus	38.09	38.7
PGSC0003DMT400049420	Potato	cytosol	35.66	37.65
TraesCS3D01G067700.1	Wheat	cytosol	38.66	37.53
KRH10240	Soybean	cytosol	32.1	37.13
TraesCS3D01G067800.1	Wheat	nucleus	35.52	36.83
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	32.95	36.67
KRH24780	Soybean	cytosol	34.52	36.67
VIT_13s0019g01780.t01	Wine grape	nucleus	31.38	36.67
VIT_06s0004g04970.t01	Wine grape	cytosol	34.38	36.63
KRH49113	Soybean	cytosol	38.23	36.51
CDY47877	Canola	nucleus	32.1	36.41
KRH29771	Soybean	cytosol	35.24	36.32
Bra028391.1-P	Field mustard	nucleus	31.95	36.13
KRG99969	Soybean	cytosol	37.95	36.09
KRH23095	Soybean	cytosol	33.67	35.92
KRH65839	Soybean	cytosol, plastid	37.38	35.89
CDY39530	Canola	cytosol	31.67	35.86
PGSC0003DMT400016258	Potato	cytosol	37.23	35.85
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.23	35.83
CDY71578	Canola	nucleus, plastid	26.53	35.7
TraesCS5D01G494900.1	Wheat	cytosol	33.38	35.62
KRH29773	Soybean	cytosol	31.1	35.5
Bra033813.1-P	Field mustard	nucleus	29.24	35.22
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	32.38	35.14
KRH24773	Soybean	nucleus	34.38	35.08
VIT_13s0019g01810.t01	Wine grape	cytosol	37.38	35.03
TraesCS5D01G152700.1	Wheat	cytosol, plastid	38.52	34.88
CDX79750	Canola	peroxisome	33.52	34.87
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	33.38	34.77
CDY07777	Canola	cytosol, nucleus, peroxisome	33.38	34.77
Solyc05g053090.1.1	Tomato	cytosol	36.8	34.72
KRH23094	Soybean	cytosol	27.39	34.72
KRH29774	Soybean	cytosol	31.24	34.71
PGSC0003DMT400022997	Potato	cytosol, plastid	37.66	34.69
Solyc09g010920.1.1	Tomato	cytosol	37.66	34.69
TraesCS4D01G136000.1	Wheat	cytosol	32.1	34.67
VIT_13s0019g01710.t01	Wine grape	cytosol	35.95	34.66
TraesCS4D01G136100.1	Wheat	cytosol	28.82	34.59
VIT_06s0004g04950.t01	Wine grape	cytosol	37.09	34.48
AT3G46600.1	Thale cress	cytosol	28.67	34.48
CDX82987	Canola	nucleus	29.53	34.44
PGSC0003DMT400069949	Potato	cytosol	36.66	34.4
KRH24775	Soybean	cytosol	33.24	34.26
KRH10243	Soybean	nucleus	32.38	34.14
GSMUA_AchrUn_...	Banana	cytosol	31.81	33.84
VIT_13s0019g01790.t01	Wine grape	cytosol	34.66	33.8
Solyc01g100200.2.1	Tomato	nucleus	32.1	33.78
Bra015584.1-P	Field mustard	cytosol	20.97	33.72
CDY33040	Canola	nucleus	28.67	33.67
VIT_06s0004g04980.t01	Wine grape	nucleus	33.81	33.66
Solyc10g086530.1.1	Tomato	cytosol	36.52	33.64
TraesCS5D01G092000.1	Wheat	cytosol	29.53	33.6
VIT_13s0019g01700.t01	Wine grape	cytosol	36.38	33.55
KRH29775	Soybean	nucleus	32.1	33.43
TraesCS4D01G136200.1	Wheat	cytosol	28.96	33.39
KRH23089	Soybean	cytosol	30.53	33.23
AT5G59450.1	Thale cress	nucleus	28.82	33.11
KRH29779	Soybean	cytosol	34.95	33.02
KRH24778	Soybean	nucleus	31.53	32.69
KRH23090	Soybean	vacuole	28.96	32.69
Solyc06g082530.1.1	Tomato	cytosol	30.39	32.62
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	34.52	32.57
CDY47878	Canola	nucleus	32.1	32.56
KRH10241	Soybean	cytosol, nucleus, peroxisome	31.95	32.56
TraesCS7D01G174100.1	Wheat	cytosol	32.52	32.48
PGSC0003DMT400077972	Potato	cytosol	34.81	32.45
TraesCS3D01G354100.1	Wheat	cytosol, extracellular, nucleus	37.8	32.4
Solyc06g076280.1.1	Tomato	cytosol	34.52	32.35
CDY06266	Canola	cytosol	29.1	32.28
CDX86475	Canola	nucleus	32.67	32.25
AT2G37650.1	Thale cress	cytosol	32.95	32.17
Bra028390.1-P	Field mustard	cytosol	32.24	32.01
AT2G29060.1	Thale cress	cytosol	31.67	31.99
CDX68388	Canola	cytosol	18.83	31.88
TraesCS7D01G174300.1	Wheat	cytosol	33.1	31.82
TraesCS4D01G136300.1	Wheat	cytosol	30.53	31.75
CDX77228	Canola	cytosol	30.39	31.7
TraesCS4D01G135900.1	Wheat	cytosol	28.82	31.66
PGSC0003DMT400078286	Potato	nucleus	30.1	31.63
Bra030688.1-P	Field mustard	nucleus	33.38	31.49
TraesCS4D01G135500.1	Wheat	cytosol	28.67	31.11
CDY15616	Canola	nucleus	31.67	31.05
CDY31749	Canola	cytosol	32.1	30.99
Bra035653.1-P	Field mustard	cytosol	31.81	30.89
VIT_06s0004g04960.t01	Wine grape	nucleus	34.95	30.74
Bra031581.1-P	Field mustard	cytosol	29.24	30.69
AT1G07520.3	Thale cress	cytosol	30.24	30.46
Bra031580.1-P	Field mustard	cytosol	29.81	30.29
CDY06265	Canola	cytosol	29.81	30.29
AT1G07530.1	Thale cress	cytosol	33.1	30.17
TraesCS4D01G332000.1	Wheat	cytosol	28.82	29.93
CDY09912	Canola	cytosol	29.67	29.71
TraesCS4D01G136400.1	Wheat	mitochondrion	30.1	29.63
TraesCS4D01G136500.1	Wheat	peroxisome	31.67	28.94
CDY09911	Canola	nucleus	22.82	27.4
TraesCS5D01G419400.2	Wheat	cytosol	19.26	24.55
TraesCS2D01G198200.1	Wheat	cytosol	19.26	24.32
TraesCS4D01G266400.1	Wheat	cytosol	18.12	23.69
TraesCS2D01G220200.1	Wheat	cytosol	18.4	22.63
TraesCS3D01G403100.1	Wheat	cytosol	17.26	21.92
TraesCS2D01G393200.1	Wheat	cytosol	16.41	18.34

Protein Annotations

EnsemblPlants:TraesCS1D01G030800.1	EnsemblPlantsGene:TraesCS1D01G030800	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14
PFAM:PF03514	PFscan:PS50985	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr1D:-:12029858..12031963

Molecular Weight (calculated)

79602.0 Da

IEP (calculated)

8.551

GRAVY (calculated)

-0.397

Length

701 amino acids

Sequence
(BLAST)

001: MAIEPLRDNL DTLAATNQPY GDSSSQQQLT VYNYDLSCPH STVLSPANQV SVNSSHGQNK FQIAAGSSPE HHRIRSNDAL HYISQMLMED VDEVDICQGA
101: ALQAAEKPFR DILGEVCTPP TNWPPLNSNN KPDNPDKSGT SRYKRVWSTS FSNDYSSYNM LQPLATPLSP YICNRSPFLP NQPLISVGWT SGSGFLALHG
201: QRGVRQERMF APSIDKLVIY SKNNILYISQ LTTKAKVGER TENTIFEVAD PRGWDIFQRR SNEHHAITTC AIIRNENFDQ VLLCYDRSDR ITRLRERMAG
301: EGNKTSLKGR SRSRKQPRKE LVDLRTLLIH CAQAVAEHSY LLASELLLKI RQHSSADGDC TQRLAFYLAD GLKARLAGTG SQVYRNLVER QTSTADWLEA
401: YSLFLAAFPF GRASYYFANQ AILDVSQGKP RVHIVDFGIG FGFQWPLMIQ IFAQREEGAP KLRITGIDVP LSGFHPCKMI EETGKRLADY ANRFKVPFQY
501: QGIAASRWET IKIDDLNIDE VEVLIVNCMF RMKNLGHETD AVNGARDKVL KTMRRMDPKI FISGTVNGLL SSPFFIQRFK EVMLHYSSVF DMLDANVPRD
601: NEARKMIERI LFGQDALNII ACEGAQRTER PEIYRQWQAR CLKAGFQQLP VDPAILKNIV HRKNLLFHQE FFAVEDCGWL LQGWKGRVLY AVSKWKPNDD
701: Q

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.