Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G506000.1 | Wheat | cytosol | 85.78 | 95.86 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 77.19 | 89.21 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 77.33 | 81.82 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 61.04 | 63.78 |
| OQU84120 | Sorghum | nucleus | 48.3 | 51.42 |
| Zm00001d003553_P001 | Maize | cytosol | 45.78 | 50.91 |
| KXG26392 | Sorghum | cytosol | 47.56 | 50.63 |
| Zm00001d048600_P001 | Maize | nucleus | 47.26 | 49.46 |
| KXG29232 | Sorghum | cytosol | 49.04 | 48.68 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 47.7 | 47.77 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 39.41 | 45.55 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 43.56 | 45.3 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 47.56 | 45.08 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 39.85 | 43.67 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 39.26 | 43.59 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 46.52 | 43.07 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 43.26 | 41.6 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 45.48 | 40.03 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 26.37 | 39.64 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 33.63 | 34.55 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 37.63 | 32.82 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 38.37 | 31.66 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 31.7 | 30.01 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 29.48 | 28.84 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 29.93 | 28.82 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 30.52 | 28.41 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 27.85 | 27.81 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 29.48 | 27.56 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 29.33 | 27.16 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 20.89 | 25.41 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 20.59 | 25.27 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 18.67 | 23.51 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 18.67 | 22.11 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 17.93 | 21.92 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 17.19 | 18.5 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G332000.1 | EnsemblPlantsGene:TraesCS4D01G332000 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4D:+:489728740..489730767
Molecular Weight (calculated)
75586.3 Da
IEP (calculated)
6.216
GRAVY (calculated)
-0.312
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWMDGVGND ISTPNPRYCH CTIRNSIHST MAATPEELLG LAEPAPLSPS VFLDLPPTTH GDSQNDLALE YISRMLTEED IVDKFFYQYP DHPKLLQAEQ
101: PFAEILADTS SSAAQESFAS STSILMPSQG NNTDVMVSGC QVQDPVFLNG TGTVEPNGMV FPSESSTSMN MLSSMEFFKG MEEANMFLPT YDVMVDGRGR
201: KKRSVMDGEA EAGLGRSSKQ IVVLLHSTTT LEEEEATALE MLDRLILNGY EACPSEMQEV VRVTWEDKED KAARQSISRR GRRGARHTVV TDLETLLTRC
301: AEAVVSNDVR GASKLLERIK CHSSPTGDAR QRLAHYFTQG LEARLAGTGS RLYRSLMGKR TSVLELIRAF HLHEAASCSI KVGLLFSTNT IYKAVAGRRK
401: LHIVHYGMST GFQWPDLLRL LANREGGPPE VRITGINTPL PGPCPDALMQ EAGHRLNNCA SQFGVPFKFR AIASKPEDVR AEELHIDPDE VLVVSSLYEF
501: RTLMDESLTF DMVSPRDMVL NTIRKMRPSV FISSVVNGPY SAAFFMTRFR HALYYFTALF DVMETTVPRD GGERLLVERD ILARSAINMI ACEGTDRVER
601: PQNYKEWQAR NQRAGLRQLP LDPDIVLRLR DEVKNRYHKH FMISEDHRWL LQGWKGRVLY AHSTWAAGDA TGSLV
101: PFAEILADTS SSAAQESFAS STSILMPSQG NNTDVMVSGC QVQDPVFLNG TGTVEPNGMV FPSESSTSMN MLSSMEFFKG MEEANMFLPT YDVMVDGRGR
201: KKRSVMDGEA EAGLGRSSKQ IVVLLHSTTT LEEEEATALE MLDRLILNGY EACPSEMQEV VRVTWEDKED KAARQSISRR GRRGARHTVV TDLETLLTRC
301: AEAVVSNDVR GASKLLERIK CHSSPTGDAR QRLAHYFTQG LEARLAGTGS RLYRSLMGKR TSVLELIRAF HLHEAASCSI KVGLLFSTNT IYKAVAGRRK
401: LHIVHYGMST GFQWPDLLRL LANREGGPPE VRITGINTPL PGPCPDALMQ EAGHRLNNCA SQFGVPFKFR AIASKPEDVR AEELHIDPDE VLVVSSLYEF
501: RTLMDESLTF DMVSPRDMVL NTIRKMRPSV FISSVVNGPY SAAFFMTRFR HALYYFTALF DVMETTVPRD GGERLLVERD ILARSAINMI ACEGTDRVER
601: PQNYKEWQAR NQRAGLRQLP LDPDIVLRLR DEVKNRYHKH FMISEDHRWL LQGWKGRVLY AHSTWAAGDA TGSLV
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.