Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29232 | Sorghum | cytosol | 71.78 | 68.09 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 44.81 | 49.49 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 45.27 | 49.41 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 46.05 | 49.17 |
| Zm00001d003553_P001 | Maize | cytosol | 45.74 | 48.6 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 48.06 | 48.59 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 48.53 | 48.45 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 47.91 | 48.06 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 47.6 | 47.74 |
| Zm00001d030744_P001 | Maize | cytosol | 36.28 | 47.56 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 49.46 | 47.26 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 48.84 | 47.23 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 47.6 | 43.42 |
| Zm00001d048601_P001 | Maize | cytosol | 42.48 | 42.68 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.3 | 42.09 |
| Zm00001d048588_P001 | Maize | cytosol | 40.93 | 41.64 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 33.95 | 40.48 |
| Zm00001d048681_P001 | Maize | cytosol | 35.66 | 40.42 |
| Zm00001d048604_P001 | Maize | cytosol | 46.67 | 39.35 |
| Zm00001d041536_P001 | Maize | cytosol | 43.1 | 39.15 |
| Zm00001d007713_P001 | Maize | cytosol | 35.35 | 38.06 |
| Zm00001d048602_P001 | Maize | cytosol | 38.76 | 37.54 |
| Zm00001d048682_P001 | Maize | nucleus | 35.19 | 36.09 |
| Zm00001d034664_P001 | Maize | plastid | 29.77 | 34.35 |
| Zm00001d028603_P001 | Maize | cytosol | 37.36 | 32.83 |
| Zm00001d035671_P001 | Maize | cytosol | 31.01 | 31.95 |
| Zm00001d011070_P001 | Maize | cytosol | 30.85 | 31.74 |
| Zm00001d042907_P001 | Maize | cytosol | 37.05 | 29.54 |
| Zm00001d047813_P002 | Maize | nucleus | 37.52 | 29.19 |
| Zm00001d033166_P001 | Maize | nucleus | 31.94 | 28.14 |
| Zm00001d035670_P001 | Maize | cytosol | 31.01 | 27.55 |
| Zm00001d021946_P001 | Maize | cytosol | 20.78 | 24.01 |
| Zm00001d006701_P001 | Maize | cytosol | 20.47 | 23.83 |
| Zm00001d030500_P001 | Maize | nucleus | 19.69 | 23.43 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 18.91 | 22.76 |
| Zm00001d038225_P001 | Maize | cytosol | 18.76 | 21.57 |
| Zm00001d048603_P001 | Maize | cytosol | 45.43 | 20.59 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 19.07 | 19.94 |
| Zm00001d051461_P001 | Maize | cytosol | 16.9 | 17.96 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 14.57 | 15.09 |
| Zm00001d002573_P001 | Maize | cytosol | 14.42 | 14.93 |
Protein Annotations
| EnsemblPlants:Zm00001d048600_P001 | EnsemblPlants:Zm00001d048600_T001 | EnsemblPlantsGene:Zm00001d048600 | EntrezGene:103655011 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 |
| InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:AIB05527.1 |
| ProteinID:AQK48243.1 | SEG:seg | UniParc:UPI0002207F4D | UniProt:K7TU12 | MapMan:15.5.12 | : |
Description
GRAS-transcription factor 43GRAS transcription factor [Source:UniProtKB/TrEMBL;Acc:K7TU12]
Coordinates
chr4:-:1042494..1044431
Molecular Weight (calculated)
72105.3 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.356
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIPPELLSS ETQPQTAAPP SPSPSPYLDL PPAPHADNAK DDLSYISHML MEEDIVVDNL YHRYRNHPML LSAEQPFAQI LCANATSDAI ATDISVQPYP
101: LQSSVPTPEY YSYSDMVTSN SMHVHQDASS LLVNGSTHEA ESSGMDMISM AFYKGMEDAT KLLITSKTHS DTLDRDRGRK KRLQEAKDGV GVAMGRSSKQ
201: KAVQWQPGSE EEAAACEMLD QLMLSDEPSH AGKQRELISS MKLEKPQERR RGGAAGLSHT VDLHALLIQC AEAMATNDQQ GAANLLLRIR HHSSPTGDAT
301: RRLAHCFTQG LEARLMGTGS HMYKLLLAKC RAATSTLKVY QMYMAASSVF PVSFLLSNRI AYNAIAGRQK LHIVHYGLGH GFHLPDLLRM LSSREGGPPE
401: VRITGIDNPL PGFHPGHIIE ETGRRLSDCA RQFRVPFKFR AIAAKLEAVC AEDLDIDPDE VLVVISHFCF KNLMDESVTV DRPNPRDTVL KNIANMRPEV
501: FIHDILNGSY SGAFFVSRFR EALKYFAAMF DAMDTIMPQE NQNRLLAEKW LAMCVMNIVA CEGVDRVSRP HSYKQWQVRS KRAGLRQLPL DPNIVQMSKD
601: KVKEEYHKYI VINEDHEWLL TGWKGRVLSA FSTWTADDVR SGLSE
101: LQSSVPTPEY YSYSDMVTSN SMHVHQDASS LLVNGSTHEA ESSGMDMISM AFYKGMEDAT KLLITSKTHS DTLDRDRGRK KRLQEAKDGV GVAMGRSSKQ
201: KAVQWQPGSE EEAAACEMLD QLMLSDEPSH AGKQRELISS MKLEKPQERR RGGAAGLSHT VDLHALLIQC AEAMATNDQQ GAANLLLRIR HHSSPTGDAT
301: RRLAHCFTQG LEARLMGTGS HMYKLLLAKC RAATSTLKVY QMYMAASSVF PVSFLLSNRI AYNAIAGRQK LHIVHYGLGH GFHLPDLLRM LSSREGGPPE
401: VRITGIDNPL PGFHPGHIIE ETGRRLSDCA RQFRVPFKFR AIAAKLEAVC AEDLDIDPDE VLVVISHFCF KNLMDESVTV DRPNPRDTVL KNIANMRPEV
501: FIHDILNGSY SGAFFVSRFR EALKYFAAMF DAMDTIMPQE NQNRLLAEKW LAMCVMNIVA CEGVDRVSRP HSYKQWQVRS KRAGLRQLPL DPNIVQMSKD
601: KVKEEYHKYI VINEDHEWLL TGWKGRVLSA FSTWTADDVR SGLSE
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.