Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01740 | Sorghum | cytosol | 91.97 | 92.19 |
| Os01t0842200-01 | Rice | cytosol | 76.76 | 75.73 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 70.83 | 72.44 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 72.56 | 71.76 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 71.82 | 71.29 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 68.97 | 70.63 |
| Zm00001d030744_P001 | Maize | cytosol | 31.89 | 52.44 |
| Zm00001d034664_P001 | Maize | plastid | 32.63 | 47.23 |
| Zm00001d028603_P001 | Maize | cytosol | 42.65 | 47.0 |
| Zm00001d035671_P001 | Maize | cytosol | 34.12 | 44.09 |
| Zm00001d011070_P001 | Maize | cytosol | 33.37 | 43.06 |
| Zm00001d041536_P001 | Maize | cytosol | 37.08 | 42.25 |
| Zm00001d047813_P002 | Maize | nucleus | 42.65 | 41.62 |
| Zm00001d048588_P001 | Maize | cytosol | 31.52 | 40.22 |
| Zm00001d048601_P001 | Maize | cytosol | 31.15 | 39.25 |
| Zm00001d048604_P001 | Maize | cytosol | 36.71 | 38.82 |
| Zm00001d003553_P001 | Maize | cytosol | 28.8 | 38.39 |
| Zm00001d035670_P001 | Maize | cytosol | 34.36 | 38.29 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 25.22 | 37.71 |
| Zm00001d048602_P001 | Maize | cytosol | 30.53 | 37.09 |
| Zm00001d048600_P001 | Maize | nucleus | 29.54 | 37.05 |
| Zm00001d048681_P001 | Maize | cytosol | 25.71 | 36.56 |
| Zm00001d033166_P001 | Maize | nucleus | 32.76 | 36.2 |
| Zm00001d048682_P001 | Maize | nucleus | 27.07 | 34.82 |
| Zm00001d007713_P001 | Maize | cytosol | 24.97 | 33.72 |
| Zm00001d030500_P001 | Maize | nucleus | 17.06 | 25.46 |
| Zm00001d006701_P001 | Maize | cytosol | 17.43 | 25.45 |
| Zm00001d021946_P001 | Maize | cytosol | 17.55 | 25.45 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 16.19 | 24.44 |
| Zm00001d038225_P001 | Maize | cytosol | 15.95 | 22.99 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 17.43 | 22.85 |
| Zm00001d048603_P001 | Maize | cytosol | 36.22 | 20.59 |
| Zm00001d051461_P001 | Maize | cytosol | 14.34 | 19.11 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 13.97 | 18.14 |
| Zm00001d002573_P001 | Maize | cytosol | 13.72 | 17.82 |
Protein Annotations
| EntrezGene:100279528 | MapMan:15.5.12 | UniProt:B7ZYK9 | EMBL:BT054401 | EMBL:BT061445 | EMBL:BT066353 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR005202 | ProteinID:ONM36509.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF131 | InterPro:TF_GRAS | UniParc:UPI00019172E3 | EnsemblPlantsGene:Zm00001d042907 | EnsemblPlants:Zm00001d042907_P001 | EnsemblPlants:Zm00001d042907_T001 |
| SEG:seg | : | : | : | : | : |
Description
GRAS-transcription factor 23
Coordinates
chr3:-:183642446..183644875
Molecular Weight (calculated)
89144.7 Da
IEP (calculated)
6.479
GRAVY (calculated)
-0.344
Length
809 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMDAGLHEP CALLPGSKRD SHMLVYPQIA AAANGFTAQE LESLLFLSSD GITLAAGSGG GGGGGSYLNV APTTVVPPAP TNRASPPRDV SAAPPSVGQP
101: DDSEAFSDIV LGYINRMLMA EDIDDKFEHY PEHPAVLAAE KPFLEILAER PSSSGGSAVE SPGGSSVGNS CYSARSCTCA TATAASDAFG AVLTPALDFP
201: SAAFLQPPQL YQDLSPEGSV VDAGGAWPYD STEFYQLHSN PSSFASSNGS CATISDGFES LLSSPGVMPD VGFTDFAVQS QQAMQFCRGF EEASKFLPDE
301: SKLVIDLEKP ASVTSLVANI KGENRFAEVK AEKADVQAEI HRGKKHFYGD DLDAEEGRRS KHSAPAIDTD HLVREMMDKV LLCNGETCSK GVKELREALQ
401: HDVAKNSHGV HGKGSGHGKG RGKKQPKKEV VDLETLLVHC AQSVATDDRR GATELLKQIR QHASPNGDGD QRLAHCFANG LEARLAGNGS QIYKSLIMTR
501: FPCTDVLKAY QLYLAACPFK KISHFFANQT IMNAVEKAKK VHIVDYGIYY GFQWPCLIQR LSTRPGGPPR LRITAIDTPH PGFRPAERIE ETGRYLKDYA
601: ETFNVPFEFR AIPSRFEAVQ IEDLHIAKDE LLIVNSMFKF KTLMDESVVA ESPRNMVLST IRKMNPHLFI HGIINGSYNA PFFASRFREA LYHYSAIFDM
701: LETNIPRDNE QRLLIESALF GREAINVISC EGLERMERPE TYKQWQVRYQ RAGFRQLPIN QDIMKRAREK VRCYHKDFLI DEDNRWLLQG WKGRIVLALS
801: TWKPDHRSP
101: DDSEAFSDIV LGYINRMLMA EDIDDKFEHY PEHPAVLAAE KPFLEILAER PSSSGGSAVE SPGGSSVGNS CYSARSCTCA TATAASDAFG AVLTPALDFP
201: SAAFLQPPQL YQDLSPEGSV VDAGGAWPYD STEFYQLHSN PSSFASSNGS CATISDGFES LLSSPGVMPD VGFTDFAVQS QQAMQFCRGF EEASKFLPDE
301: SKLVIDLEKP ASVTSLVANI KGENRFAEVK AEKADVQAEI HRGKKHFYGD DLDAEEGRRS KHSAPAIDTD HLVREMMDKV LLCNGETCSK GVKELREALQ
401: HDVAKNSHGV HGKGSGHGKG RGKKQPKKEV VDLETLLVHC AQSVATDDRR GATELLKQIR QHASPNGDGD QRLAHCFANG LEARLAGNGS QIYKSLIMTR
501: FPCTDVLKAY QLYLAACPFK KISHFFANQT IMNAVEKAKK VHIVDYGIYY GFQWPCLIQR LSTRPGGPPR LRITAIDTPH PGFRPAERIE ETGRYLKDYA
601: ETFNVPFEFR AIPSRFEAVQ IEDLHIAKDE LLIVNSMFKF KTLMDESVVA ESPRNMVLST IRKMNPHLFI HGIINGSYNA PFFASRFREA LYHYSAIFDM
701: LETNIPRDNE QRLLIESALF GREAINVISC EGLERMERPE TYKQWQVRYQ RAGFRQLPIN QDIMKRAREK VRCYHKDFLI DEDNRWLLQG WKGRIVLALS
801: TWKPDHRSP
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.