Factsheet for Zm00001d035671_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38103	Sorghum	cytosol	87.54	87.54
Zm00001d011070_P001	Maize	cytosol	62.3	62.2
Solyc04g011630.1.1	Tomato	cytosol	14.86	54.71
CDX68389	Canola	cytosol	7.19	52.94
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	24.28	47.95
CDX80265	Canola	endoplasmic reticulum, golgi	23.96	47.32
VIT_06s0004g04990.t01	Wine grape	cytosol	32.27	45.7
Zm00001d030744_P001	Maize	cytosol	33.71	42.89
PGSC0003DMT400005480	Potato	cytosol	32.43	41.68
GSMUA_Achr8P02550_001	Banana	nucleus	25.56	40.82
Zm00001d028603_P001	Maize	cytosol	47.6	40.6
Zm00001d034664_P001	Maize	plastid	35.94	40.25
VIT_13s0019g01780.t01	Wine grape	nucleus	38.34	40.0
PGSC0003DMT400049420	Potato	cytosol	42.33	39.91
Zm00001d035670_P001	Maize	cytosol	45.85	39.53
KRH10240	Soybean	cytosol	38.02	39.27
GSMUA_Achr6P34090_001	Banana	nucleus	37.86	38.73
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	43.45	38.36
KRH29773	Soybean	cytosol	37.22	37.95
VIT_13s0019g01710.t01	Wine grape	cytosol	43.93	37.83
CDY71578	Canola	nucleus, plastid	31.31	37.62
KRH23094	Soybean	cytosol	33.23	37.61
Zm00001d033166_P001	Maize	nucleus	43.93	37.57
Bra033813.1-P	Field mustard	nucleus	34.66	37.29
KRH24780	Soybean	cytosol	39.3	37.27
KRG99969	Soybean	cytosol	43.77	37.18
VIT_13s0019g01810.t01	Wine grape	cytosol	44.41	37.17
KRH49113	Soybean	cytosol	43.45	37.06
AT5G59450.1	Thale cress	nucleus	36.1	37.05
PGSC0003DMT400016258	Potato	cytosol	42.97	36.95
PGSC0003DMT400069949	Potato	cytosol	44.09	36.95
KRH29774	Soybean	cytosol	37.22	36.93
CDY47877	Canola	nucleus	36.42	36.89
AT3G46600.1	Thale cress	cytosol	34.34	36.88
CDY39530	Canola	cytosol	36.42	36.83
Bra028391.1-P	Field mustard	nucleus	36.42	36.77
KRH65839	Soybean	cytosol, plastid	42.81	36.71
Bra015584.1-P	Field mustard	cytosol	25.56	36.7
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	36.9	36.67
KRH24775	Soybean	cytosol	39.78	36.62
Solyc05g053090.1.1	Tomato	cytosol	43.45	36.61
CDY33040	Canola	nucleus	34.82	36.52
CDX82987	Canola	nucleus	34.98	36.44
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	39.14	36.4
KRH29771	Soybean	cytosol	39.46	36.32
CDY07777	Canola	cytosol, nucleus, peroxisome	38.98	36.26
KRH23095	Soybean	cytosol	38.02	36.23
CDX79750	Canola	peroxisome	38.98	36.2
VIT_06s0004g04970.t01	Wine grape	cytosol	38.02	36.17
KRH29775	Soybean	nucleus	38.66	35.96
Zm00001d047813_P002	Maize	nucleus	47.6	35.95
VIT_06s0004g04980.t01	Wine grape	nucleus	40.1	35.65
Zm00001d048588_P001	Maize	cytosol	36.1	35.65
Solyc10g086530.1.1	Tomato	cytosol	43.29	35.61
VIT_13s0019g01700.t01	Wine grape	cytosol	42.81	35.26
PGSC0003DMT400022997	Potato	cytosol, plastid	42.81	35.22
VIT_13s0019g01790.t01	Wine grape	cytosol	40.42	35.19
KRH24773	Soybean	nucleus	38.5	35.08
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	36.1	34.98
CDX86475	Canola	nucleus	39.62	34.93
KRH24778	Soybean	nucleus	37.7	34.91
Solyc09g010920.1.1	Tomato	cytosol	42.33	34.82
Zm00001d041536_P001	Maize	cytosol	39.3	34.65
Zm00001d048601_P001	Maize	cytosol	35.14	34.27
VIT_06s0004g04950.t01	Wine grape	cytosol	41.21	34.22
KRH23089	Soybean	cytosol	35.14	34.16
CDY47878	Canola	nucleus	37.7	34.15
AT2G29060.1	Thale cress	cytosol	37.86	34.15
Zm00001d042907_P001	Maize	cytosol	44.09	34.12
Solyc06g082530.1.1	Tomato	cytosol	35.46	34.0
KRH10243	Soybean	nucleus	36.1	33.98
AT2G37650.1	Thale cress	cytosol	38.98	33.98
Bra028390.1-P	Field mustard	cytosol	38.18	33.85
KRH29779	Soybean	cytosol	39.78	33.56
GSMUA_AchrUn_...	Banana	cytosol	35.3	33.54
Solyc01g100200.2.1	Tomato	nucleus	35.62	33.48
Zm00001d003553_P001	Maize	cytosol	32.43	33.44
Bra030688.1-P	Field mustard	nucleus	39.62	33.38
PGSC0003DMT400077972	Potato	cytosol	40.1	33.38
Solyc06g076280.1.1	Tomato	cytosol	39.78	33.29
PGSC0003DMT400078286	Potato	nucleus	35.3	33.13
CDY06266	Canola	cytosol	33.39	33.07
KRH23090	Soybean	vacuole	32.59	32.85
Bra035653.1-P	Field mustard	cytosol	37.86	32.83
CDX77228	Canola	cytosol	35.14	32.74
CDY15616	Canola	nucleus	37.38	32.73
CDY31749	Canola	cytosol	37.86	32.64
CDX68388	Canola	cytosol	21.57	32.61
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	38.18	32.17
AT1G07530.1	Thale cress	cytosol	39.46	32.12
AT1G07520.3	Thale cress	cytosol	35.62	32.04
KRH10241	Soybean	cytosol, nucleus, peroxisome	34.98	31.83
Zm00001d048681_P001	Maize	cytosol	28.75	31.63
Bra031581.1-P	Field mustard	cytosol	33.55	31.44
Zm00001d048602_P001	Maize	cytosol	33.39	31.38
Zm00001d048682_P001	Maize	nucleus	31.47	31.32
CDY06265	Canola	cytosol	34.5	31.3
Bra031580.1-P	Field mustard	cytosol	34.34	31.16
Zm00001d048600_P001	Maize	nucleus	31.95	31.01
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	26.68	30.87
VIT_06s0004g04960.t01	Wine grape	nucleus	39.14	30.74
Zm00001d048604_P001	Maize	cytosol	37.06	30.33
CDY09912	Canola	cytosol	33.71	30.14
Zm00001d007713_P001	Maize	cytosol	27.8	29.05
CDY09911	Canola	nucleus	25.72	27.57
Zm00001d006701_P001	Maize	cytosol	22.68	25.63
Zm00001d021946_P001	Maize	cytosol	22.68	25.45
Zm00001d048199_P001	Maize	mitochondrion, nucleus	21.09	24.63
Zm00001d038225_P001	Maize	cytosol	21.73	24.24
Zm00001d030500_P001	Maize	nucleus	20.29	23.43
Zm00001d006551_P001	Maize	golgi, mitochondrion	20.61	20.91
Zm00001d051461_P001	Maize	cytosol	18.37	18.95
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	16.45	16.53
Zm00001d048603_P001	Maize	cytosol	37.54	16.51
Zm00001d002573_P001	Maize	cytosol	16.29	16.37

Protein Annotations

EnsemblPlants:Zm00001d035671_P001	EnsemblPlants:Zm00001d035671_T001	EnsemblPlantsGene:Zm00001d035671	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF14	PFAM:PF03514	PFscan:PS50985	ProteinID:AQK79426.1	UniParc:UPI0002213FE9
UniProt:A0A1D6LHS7	MapMan:15.5.12	:	:	:	:

Description

GRAS-transcription factor 60

Coordinates

chr6:+:40181265..40183145

Molecular Weight (calculated)

71580.1 Da

IEP (calculated)

6.034

GRAVY (calculated)

-0.515

Length

626 amino acids

Sequence
(BLAST)

001: MESPEYCEIN SNMTLDYINR LLMEEGTDEK ASIYQQLDAL QAMEKPFYDI IGQTYPSSPM ETMISRDNQV DCPQDNYSKQ ARRGCFVSDI LEPQGVHLVA
101: NDWTYECDHF SLQFERGAEE ANKLVPNIAK LADLDSNGLS DSNRMIEATI GQKGKHGSKI RSHPHVDLEF LEARNSKHLA ISASETTRDE MFDSVLLCDC
201: RFNCDAAHIR EIKAKEANNS SQNVRRKGYG QRQVKSRGKK KEEEVDLRAH LMQCAQAIVV NNLPFASELL EKIRRHASPY GDGSQRLALY LANGLEARLA
301: GTGSQMYKEL MEKQTRATDM LKAYRLFNAV CPFARVAYYF SNQTIADLSN GQPKVHIIDF GITLGFQWPS LIQRFAKREG GPPKLRITGI DVPQPGFRPR
401: AIIEATGKRL TEYAEMFNVP FEYQDIASPW EDICIENLNI DNDEALIVNC MFRTQYLGDE TEDIDSARDR VLRTMKRINP EVLILGIVNG MYSSPFFLTR
501: FREVVFHYSA LFDMLDATAP QSHEDRIQIE RDLLGASALN VVACEGAERI VRPETYKPWQ VRCLKAGFKQ LPVDKAIMKR SIDEKDKHYH EDFVIDEDSR
601: WLIQGWKGRI MHAVSSWKPK ESYTNQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.