Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84112 | Sorghum | cytosol | 75.98 | 70.57 |
| Zm00001d048588_P001 | Maize | cytosol | 51.65 | 54.26 |
| Zm00001d030744_P001 | Maize | cytosol | 34.53 | 46.75 |
| Zm00001d048601_P001 | Maize | cytosol | 44.29 | 45.95 |
| Zm00001d048604_P001 | Maize | cytosol | 51.05 | 44.44 |
| Zm00001d003553_P001 | Maize | cytosol | 39.79 | 43.66 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 27.63 | 40.98 |
| Zm00001d041536_P001 | Maize | cytosol | 43.24 | 40.56 |
| Zm00001d048681_P001 | Maize | cytosol | 34.38 | 40.25 |
| Zm00001d007713_P001 | Maize | cytosol | 35.29 | 39.23 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 31.68 | 39.0 |
| Zm00001d048600_P001 | Maize | nucleus | 37.54 | 38.76 |
| Zm00001d048682_P001 | Maize | nucleus | 36.19 | 38.31 |
| Zm00001d034664_P001 | Maize | plastid | 31.08 | 37.03 |
| Zm00001d035671_P001 | Maize | cytosol | 31.38 | 33.39 |
| Zm00001d011070_P001 | Maize | cytosol | 31.38 | 33.33 |
| Zm00001d028603_P001 | Maize | cytosol | 36.19 | 32.83 |
| Zm00001d042907_P001 | Maize | cytosol | 37.09 | 30.53 |
| Zm00001d035670_P001 | Maize | cytosol | 31.53 | 28.93 |
| Zm00001d047813_P002 | Maize | nucleus | 35.74 | 28.71 |
| Zm00001d033166_P001 | Maize | nucleus | 31.23 | 28.42 |
| Zm00001d048603_P001 | Maize | cytosol | 50.75 | 23.75 |
| Zm00001d021946_P001 | Maize | cytosol | 19.67 | 23.48 |
| Zm00001d030500_P001 | Maize | nucleus | 19.07 | 23.43 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 18.62 | 23.13 |
| Zm00001d006701_P001 | Maize | cytosol | 19.07 | 22.92 |
| Zm00001d038225_P001 | Maize | cytosol | 19.22 | 22.82 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 19.67 | 21.23 |
| Zm00001d051461_P001 | Maize | cytosol | 18.62 | 20.43 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 17.42 | 18.62 |
| Zm00001d002573_P001 | Maize | cytosol | 17.12 | 18.3 |
Protein Annotations
| EMBL:BT066225 | EnsemblPlants:Zm00001d048602_P001 | EnsemblPlants:Zm00001d048602_T001 | EnsemblPlantsGene:Zm00001d048602 | EntrezGene:100383117 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 |
| ProteinID:AQK48245.1 | SEG:seg | UniParc:UPI000194B146 | UniProt:C0PD56 | MapMan:15.5.12 | : |
Description
GRAS-transcription factor 72
Coordinates
chr4:-:1048188..1050188
Molecular Weight (calculated)
73490.5 Da
IEP (calculated)
5.544
GRAVY (calculated)
-0.425
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEPADVGD SEPEPFSPSD FLNLGPPTPR LDSPALQLHD DDDDLVLLFI SRMLMEEETD GFFEQYHPDH PALLQAQQPF ADILAGAAAA DGSRGTSVAG
101: SPAFAANAIW PYDPVQLSQL LLSRTYPADT AAYPSAAADS MASSAGSGAG TVNMDMLNLA FLKGMEEASK FLPATSNNHD HRRQATETCD KRVDESSPLL
201: QQSASKGRKN HRHAPYWGED EEAETGRRSC KVMAVETEES EMVEEFVQSG YDSLHEQMMA MTLSTAGSRK GKGKGKGSAN EAVDLRTLLI HCAQAVAAGN
301: RPSAADLLGK IRARSSPRGD ATQRLAHCFA GGLEARLAGT GTQQLTAATK RASAVEILRA YQLYLAACSF TAMAYKFSNL AICKAVGGGG RKKVHIVDYG
401: DHYYGFQWPS LLGYWGSLEA GPPEVRITAI DFPEPGFRPD ARLQATGRRL TCFARRHGVP LRFHGIEARW DAVSVDELSI ERDEVLVVNG LFSLGRMQEQ
501: EQDDVDRDSR PSPRDTVLGN VRKMRPDVFV LCVENSSYGA PLFVTRFREA LFYYSALFDM MDAVAARDDD DRVLVEQHLF GQRALNAIAC EGSDRVERPE
601: TYRQWQVRNE RAGLRQLPLD PDAVRAIRRK VKDKYHRDLF IDEDQQWLLQ GWKGRVLYAM SAWAAK
101: SPAFAANAIW PYDPVQLSQL LLSRTYPADT AAYPSAAADS MASSAGSGAG TVNMDMLNLA FLKGMEEASK FLPATSNNHD HRRQATETCD KRVDESSPLL
201: QQSASKGRKN HRHAPYWGED EEAETGRRSC KVMAVETEES EMVEEFVQSG YDSLHEQMMA MTLSTAGSRK GKGKGKGSAN EAVDLRTLLI HCAQAVAAGN
301: RPSAADLLGK IRARSSPRGD ATQRLAHCFA GGLEARLAGT GTQQLTAATK RASAVEILRA YQLYLAACSF TAMAYKFSNL AICKAVGGGG RKKVHIVDYG
401: DHYYGFQWPS LLGYWGSLEA GPPEVRITAI DFPEPGFRPD ARLQATGRRL TCFARRHGVP LRFHGIEARW DAVSVDELSI ERDEVLVVNG LFSLGRMQEQ
501: EQDDVDRDSR PSPRDTVLGN VRKMRPDVFV LCVENSSYGA PLFVTRFREA LFYYSALFDM MDAVAARDDD DRVLVEQHLF GQRALNAIAC EGSDRVERPE
601: TYRQWQVRNE RAGLRQLPLD PDAVRAIRRK VKDKYHRDLF IDEDQQWLLQ GWKGRVLYAM SAWAAK
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.