Factsheet for Zm00001d035670_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18882	Sorghum	cytosol	84.16	83.36
EES18880	Sorghum	cytosol	83.33	81.65
TraesCS1B01G037500.1	Wheat	cytosol	33.75	59.32
CDX68389	Canola	cytosol	6.47	55.29
Solyc04g011630.1.1	Tomato	cytosol	12.95	55.29
TraesCS1D01G030800.1	Wheat	cytosol	52.89	54.78
TraesCS1B01G037300.1	Wheat	cytosol	52.89	54.55
TraesCS1D01G031000.1	Wheat	cytosol	53.72	53.79
TraesCS1D01G031200.1	Wheat	cytosol	53.99	53.77
HORVU1Hr1G004440.1	Barley	cytosol	53.17	53.69
TraesCS1A01G030300.1	Wheat	cytosol	52.2	53.68
TraesCS1D01G030900.1	Wheat	cytosol	52.62	53.58
TraesCS1A01G030200.1	Wheat	cytosol	52.48	52.84
TraesCS1B01G037400.1	Wheat	cytosol	51.93	52.14
TraesCS1B01G037200.1	Wheat	nucleus	51.38	49.27
Zm00001d011070_P001	Maize	cytosol	40.5	46.89
VIT_06s0004g04990.t01	Wine grape	cytosol	28.1	46.15
GSMUA_Achr8P02550_001	Banana	nucleus	24.79	45.92
Zm00001d035671_P001	Maize	cytosol	39.53	45.85
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.87	43.22
CDX80265	Canola	endoplasmic reticulum, golgi	18.59	42.59
Zm00001d030744_P001	Maize	cytosol	28.37	41.87
GSMUA_Achr6P34090_001	Banana	nucleus	34.3	40.69
PGSC0003DMT400005480	Potato	cytosol	27.0	40.25
Zm00001d028603_P001	Maize	cytosol	40.08	39.65
VIT_13s0019g01780.t01	Wine grape	nucleus	32.23	39.0
PGSC0003DMT400049420	Potato	cytosol	35.54	38.86
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	37.33	38.22
KRH29773	Soybean	cytosol	32.09	37.95
Zm00001d034664_P001	Maize	plastid	29.2	37.92
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	34.85	37.59
CDY07777	Canola	cytosol, nucleus, peroxisome	34.85	37.59
CDX79750	Canola	peroxisome	34.85	37.54
KRH65839	Soybean	cytosol, plastid	37.47	37.26
KRH10240	Soybean	cytosol	30.99	37.13
KRG99969	Soybean	cytosol	37.47	36.91
KRH49113	Soybean	cytosol	37.19	36.78
CDY71578	Canola	nucleus, plastid	26.31	36.66
Bra033813.1-P	Field mustard	nucleus	29.34	36.6
AT3G46600.1	Thale cress	cytosol	29.34	36.54
KRH23094	Soybean	cytosol	27.82	36.53
KRH24780	Soybean	cytosol	33.2	36.52
KRH29774	Soybean	cytosol	31.68	36.45
PGSC0003DMT400016258	Potato	cytosol	36.5	36.4
Zm00001d033166_P001	Maize	nucleus	36.64	36.34
KRH29775	Soybean	nucleus	33.61	36.26
Bra015584.1-P	Field mustard	cytosol	21.76	36.24
KRH24775	Soybean	cytosol	33.88	36.18
VIT_13s0019g01790.t01	Wine grape	cytosol	35.81	36.16
KRH24778	Soybean	nucleus	33.61	36.09
Solyc09g010920.1.1	Tomato	cytosol	37.47	35.74
VIT_13s0019g01810.t01	Wine grape	cytosol	36.78	35.7
KRH23095	Soybean	cytosol	32.23	35.62
CDX82987	Canola	nucleus	29.48	35.61
AT2G37650.1	Thale cress	cytosol	35.12	35.52
GSMUA_AchrUn_...	Banana	cytosol	32.23	35.51
CDX86475	Canola	nucleus	34.71	35.49
PGSC0003DMT400022997	Potato	cytosol, plastid	37.19	35.48
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	30.72	35.4
KRH24773	Soybean	nucleus	33.47	35.37
VIT_13s0019g01710.t01	Wine grape	cytosol	35.4	35.35
VIT_06s0004g04970.t01	Wine grape	cytosol	31.96	35.26
Solyc10g086530.1.1	Tomato	cytosol	36.91	35.22
KRH29771	Soybean	cytosol	32.92	35.15
CDY47877	Canola	nucleus	29.89	35.11
Bra028391.1-P	Field mustard	nucleus	29.89	35.0
AT5G59450.1	Thale cress	nucleus	29.34	34.92
Zm00001d047813_P002	Maize	nucleus	39.81	34.86
VIT_13s0019g01700.t01	Wine grape	cytosol	36.36	34.74
CDY39530	Canola	cytosol	29.61	34.73
CDY33040	Canola	nucleus	28.51	34.67
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.72	34.52
PGSC0003DMT400069949	Potato	cytosol	35.4	34.4
VIT_06s0004g04980.t01	Wine grape	nucleus	33.33	34.38
Zm00001d042907_P001	Maize	cytosol	38.29	34.36
Bra030688.1-P	Field mustard	nucleus	35.12	34.32
Zm00001d048588_P001	Maize	cytosol	29.89	34.23
Solyc05g053090.1.1	Tomato	cytosol	34.99	34.19
CDY47878	Canola	nucleus	32.37	34.01
CDY15616	Canola	nucleus	33.47	33.99
KRH10243	Soybean	nucleus	30.99	33.83
VIT_06s0004g04950.t01	Wine grape	cytosol	35.12	33.82
Zm00001d041536_P001	Maize	cytosol	33.06	33.8
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	34.57	33.78
AT2G29060.1	Thale cress	cytosol	32.23	33.72
KRH23089	Soybean	cytosol	29.89	33.7
PGSC0003DMT400077972	Potato	cytosol	34.85	33.64
Solyc01g100200.2.1	Tomato	nucleus	30.85	33.63
Bra028390.1-P	Field mustard	cytosol	32.64	33.57
Solyc06g076280.1.1	Tomato	cytosol	34.44	33.42
Zm00001d003553_P001	Maize	cytosol	27.82	33.28
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	24.79	33.27
KRH29779	Soybean	cytosol	33.75	33.02
KRH10241	Soybean	cytosol, nucleus, peroxisome	31.13	32.85
Zm00001d048601_P001	Maize	cytosol	28.93	32.71
Solyc06g082530.1.1	Tomato	cytosol	29.34	32.62
AT1G07530.1	Thale cress	cytosol	34.3	32.38
PGSC0003DMT400078286	Potato	nucleus	29.61	32.23
CDY06266	Canola	cytosol	27.82	31.96
Zm00001d048681_P001	Maize	cytosol	24.79	31.63
Zm00001d048602_P001	Maize	cytosol	28.93	31.53
AT1G07520.3	Thale cress	cytosol	30.17	31.47
KRH23090	Soybean	vacuole	26.86	31.4
CDX77228	Canola	cytosol	28.79	31.1
Bra031580.1-P	Field mustard	cytosol	29.48	31.01
CDY06265	Canola	cytosol	29.48	31.01
Zm00001d048600_P001	Maize	nucleus	27.55	31.01
Bra035653.1-P	Field mustard	cytosol	30.72	30.89
CDY31749	Canola	cytosol	30.72	30.72
Bra031581.1-P	Field mustard	cytosol	28.1	30.54
CDY09912	Canola	cytosol	29.34	30.43
Zm00001d048682_P001	Maize	nucleus	26.31	30.37
CDX68388	Canola	cytosol	17.22	30.19
Zm00001d048604_P001	Maize	cytosol	31.54	29.93
VIT_06s0004g04960.t01	Wine grape	nucleus	32.78	29.86
Zm00001d007713_P001	Maize	cytosol	24.38	29.55
CDY09911	Canola	nucleus	22.73	28.25
Zm00001d021946_P001	Maize	cytosol	19.7	25.63
Zm00001d006701_P001	Maize	cytosol	19.01	24.91
Zm00001d048199_P001	Maize	mitochondrion, nucleus	17.77	24.07
Zm00001d030500_P001	Maize	nucleus	17.49	23.43
Zm00001d038225_P001	Maize	cytosol	16.25	21.03
Zm00001d006551_P001	Maize	golgi, mitochondrion	17.22	20.26
Zm00001d048603_P001	Maize	cytosol	31.54	16.09
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	13.64	15.89
Zm00001d051461_P001	Maize	cytosol	13.22	15.82
Zm00001d002573_P001	Maize	cytosol	13.22	15.41

Protein Annotations

EnsemblPlants:Zm00001d035670_P001	EnsemblPlants:Zm00001d035670_T001	EnsemblPlantsGene:Zm00001d035670	EntrezGene:103631021	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202
InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14	PFAM:PF03514	PFscan:PS50985	ProteinID:AIB05184.1
ProteinID:AQK79425.1	UniParc:UPI0002213FF5	UniProt:K7UES9	MapMan:15.5.12	:	:

Description

GRAS-transcription factor 57GRAS transcription factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:K7UES9]

Coordinates

chr6:+:40169888..40172068

Molecular Weight (calculated)

82529.4 Da

IEP (calculated)

7.921

GRAVY (calculated)

-0.448

Length

726 amino acids

Sequence
(BLAST)

001: MPIEPSFDDL YTITAPGQRQ DGSSFSSQQQ LTLYDHRLCD PQLFHKPTNE SNMQFSGVVT IPGMHNVSTN LGQNHLQITT GVSPDYQRIR SNNALHHISQ
101: ILMEDVDERV GSHEGGAALQ DAEKAFYDIL QQVYPPSLDW SPLHNSSEAG GPNEGSSNYH KRPRRSSFTN DISSHSMLQS LPAPLSPYGY GRSLLLPYQS
201: LANTGRASRF GSPALQTRRE AEDAKWFDKM VINLDDDKLF ISILTTAKAK RIVGKSKYAI FQITGHRNNP YIQDLDTREG RSKKHTISCE ISRNEKLDTV
301: LLCYGLDCFI ETARLRDMAV KEVSKDAPKG QSKANAQQKS QGGTRQLKKE VVDLRTLLIH CAQAVAADDR LLASELIKKI RQHSSRDGEW CQRQAFYFVN
401: GLEARLTGTG SQLFHKMLAK RVSEDVVLKI YNFYLAVCPF HRASYTFANQ TIMETSVGQS RVHIVDFGVC YGFQWPSLIQ LFGEQGVTPR LRITGIEVPR
501: PGFSPLENIE RAGKLLADYA NMYKVPFQYQ GIYSRYEDIQ IEDLNIEEDE VLIINCMYRM KNLGDETVAM DSARDRVLKI MRRMNPKVSI FGILNGSYSS
601: PFFVTRFKEL LFHYSSLFDM LNTNVSRDNE ARKLLEGGLL GRDILNIIAC EGADRTERPE TYQQWQARCL KAGFEQLPLD PAIMKSVLWM KKEIYHEDFV
701: ADEDNGWLLQ GWKGRVLYAL SKWKVN

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.