Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g011630.1.1 | Tomato | cytosol | 16.32 | 72.94 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 67.89 | 68.98 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 63.16 | 66.76 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 52.63 | 66.67 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 61.58 | 64.37 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 54.87 | 58.82 |
| PGSC0003DMT400016258 | Potato | cytosol | 55.66 | 58.1 |
| GSMUA_Achr10P... | Banana | nucleus | 32.11 | 55.2 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 31.71 | 54.52 |
| PGSC0003DMT400069949 | Potato | cytosol | 53.03 | 53.95 |
| Solyc05g053090.1.1 | Tomato | cytosol | 52.63 | 53.84 |
| GSMUA_Achr10P... | Banana | cytosol | 42.24 | 53.59 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 40.26 | 51.17 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 25.39 | 49.23 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 47.63 | 48.01 |
| Zm00001d034664_P001 | Maize | plastid | 35.26 | 47.94 |
| Zm00001d028603_P001 | Maize | cytosol | 46.18 | 47.82 |
| OQU92829 | Sorghum | cytosol | 46.05 | 47.68 |
| Os03t0690600-03 | Rice | cytosol | 45.66 | 47.47 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 43.95 | 47.44 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 38.03 | 47.22 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 40.26 | 46.5 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 25.26 | 46.49 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 38.42 | 45.91 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 27.5 | 45.83 |
| KXG38103 | Sorghum | cytosol | 36.45 | 44.25 |
| KXG37250 | Sorghum | cytosol | 37.89 | 44.24 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 36.84 | 43.48 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 44.34 | 43.43 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 37.37 | 43.36 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 44.08 | 43.28 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 37.37 | 43.23 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 44.08 | 43.17 |
| KXG21080 | Sorghum | cytosol | 35.53 | 43.13 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 44.61 | 43.08 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 37.24 | 43.07 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 45.0 | 42.91 |
| KXG21079 | Sorghum | cytosol | 35.13 | 42.86 |
| Zm00001d035671_P001 | Maize | cytosol | 35.26 | 42.81 |
| Zm00001d011070_P001 | Maize | cytosol | 35.0 | 42.42 |
| Zm00001d047813_P002 | Maize | nucleus | 45.39 | 41.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.39 | 40.82 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 31.58 | 40.27 |
| OQU91407 | Sorghum | nucleus | 33.29 | 36.88 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 33.82 | 36.4 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 33.55 | 36.38 |
| Zm00001d035670_P001 | Maize | cytosol | 34.74 | 36.36 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 32.89 | 36.23 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 33.55 | 36.22 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 33.82 | 35.74 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 33.29 | 35.48 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 33.55 | 35.27 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 33.16 | 35.24 |
| EER91260 | Sorghum | nucleus | 33.42 | 35.23 |
| EES18880 | Sorghum | cytosol | 34.34 | 35.22 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 33.55 | 35.17 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 33.68 | 35.12 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 33.29 | 35.09 |
| EES18882 | Sorghum | cytosol | 33.82 | 35.06 |
| Zm00001d033166_P001 | Maize | nucleus | 33.55 | 34.84 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 32.63 | 34.64 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 32.89 | 34.63 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 32.89 | 34.63 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 33.03 | 34.48 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 32.63 | 34.4 |
| OQU91406 | Sorghum | nucleus | 33.68 | 34.22 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 30.26 | 34.02 |
| KXG38064 | Sorghum | nucleus | 31.84 | 33.61 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 30.92 | 31.04 |
| VIT_19s0090g01740.t01 | Wine grape | cytosol | 21.18 | 29.54 |
| VIT_00s0463g00020.t01 | Wine grape | nucleus | 20.53 | 28.62 |
| VIT_12s0057g00560.t01 | Wine grape | cytosol | 20.0 | 27.89 |
| VIT_19s0014g04940.t01 | Wine grape | cytosol | 18.82 | 24.53 |
| VIT_18s0001g15270.t01 | Wine grape | cytosol, plastid | 17.76 | 23.89 |
| VIT_04s0044g01370.t01 | Wine grape | nucleus | 17.63 | 23.59 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 15.53 | 20.03 |
Protein Annotations
| EntrezGene:100264982 | wikigene:100264982 | MapMan:15.5.12 | ProteinID:CCB56338 | ProteinID:CCB56338.1 | UniProt:F6HNW8 |
| EMBL:FN595998 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR005202 | EntrezGene:LOC100264982 | wikigene:LOC100264982 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF44 | InterPro:TF_GRAS | UniParc:UPI0002107FE6 | ArrayExpress:VIT_13s0019g01700 | EnsemblPlantsGene:VIT_13s0019g01700 | EnsemblPlants:VIT_13s0019g01700.t01 |
| RefSeq:XP_002278420 | RefSeq:XP_002278420.2 | RefSeq:XP_010658551.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr13:+:3150553..3152844
Molecular Weight (calculated)
85419.8 Da
IEP (calculated)
6.290
GRAVY (calculated)
-0.487
Length
760 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEHLSGLYP SVNGIKFSEV YGSILSGENP SSGLGLQVPF LEQNNVFIPP FQPDPSGGNV ASWSSVGVEE DPQEDCDFSD VVIRYVSQLL MEEDVEEKTR
101: MFQESLALEA TEKSFYEVIG KEYPASKDHH LSPSAEENHE NPTANYGVYS SSTTSYGKSV ETGWNFDYEQ YKSGQIDFQS TSQSSFSSSI SPSNIAFQCT
201: SHSSFSSSNS PNTTIDGFGD RPMSIFKVPD IFNDSESVLH FKRGLEEASR FLPNGNGLFD HMAKDNSGLL VHGMNKGPNE AVVEMEKHAN GYFMGESRGK
301: KNSHLGHLDS EEERSNKQSA VCDEVTVTSE MFDRVLLCDA DKGEAALRES LQNEASKTVQ QEGGLKGSNG GRSRGWKKGG KKDLVDLRTL LTLCAQAVAA
401: DDRRSANEQL KQIRQHACPM GDGVQRMAYY FANGLEARLA GSGTQIYKGI LTKPSAANVL KAYHLLLAVS PFKKVTNFVL NKTITKVAEK AARLHIIDFG
501: IFYGFQWPSF IQRLSSRPGG PPKLRITGID LPQPGFRPVE RVEETGRRLA NYARSFNVPF EFNAIAQKWE TIQIEDLKIN TGELVVVNCR YRFRSLLDES
601: VVVESPRNIV LNLIRKMNPD IFIQGIVNGA YGVPFFMTRF REALFHFSAL YDMLETNVPR QSYERRLIEK ELFGWEAMNA IACEGSERIE RPETYKQWQV
701: RNERAGFRQL PLDQEIVKIA KKRVKSCYHK DFMMDEDGQW LLQGWKGRII YAISSWKPAH
101: MFQESLALEA TEKSFYEVIG KEYPASKDHH LSPSAEENHE NPTANYGVYS SSTTSYGKSV ETGWNFDYEQ YKSGQIDFQS TSQSSFSSSI SPSNIAFQCT
201: SHSSFSSSNS PNTTIDGFGD RPMSIFKVPD IFNDSESVLH FKRGLEEASR FLPNGNGLFD HMAKDNSGLL VHGMNKGPNE AVVEMEKHAN GYFMGESRGK
301: KNSHLGHLDS EEERSNKQSA VCDEVTVTSE MFDRVLLCDA DKGEAALRES LQNEASKTVQ QEGGLKGSNG GRSRGWKKGG KKDLVDLRTL LTLCAQAVAA
401: DDRRSANEQL KQIRQHACPM GDGVQRMAYY FANGLEARLA GSGTQIYKGI LTKPSAANVL KAYHLLLAVS PFKKVTNFVL NKTITKVAEK AARLHIIDFG
501: IFYGFQWPSF IQRLSSRPGG PPKLRITGID LPQPGFRPVE RVEETGRRLA NYARSFNVPF EFNAIAQKWE TIQIEDLKIN TGELVVVNCR YRFRSLLDES
601: VVVESPRNIV LNLIRKMNPD IFIQGIVNGA YGVPFFMTRF REALFHFSAL YDMLETNVPR QSYERRLIEK ELFGWEAMNA IACEGSERIE RPETYKQWQV
701: RNERAGFRQL PLDQEIVKIA KKRVKSCYHK DFMMDEDGQW LLQGWKGRII YAISSWKPAH
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.