Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g011630.1.1 | Tomato | cytosol | 18.5 | 65.29 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 72.5 | 60.5 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 66.67 | 53.48 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 66.67 | 52.63 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 37.67 | 51.13 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 61.33 | 50.62 |
| GSMUA_Achr10P... | Banana | nucleus | 34.5 | 46.83 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 54.0 | 45.7 |
| PGSC0003DMT400016258 | Potato | cytosol | 55.0 | 45.33 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 33.5 | 44.08 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 30.0 | 43.58 |
| Solyc05g053090.1.1 | Tomato | cytosol | 53.17 | 42.93 |
| PGSC0003DMT400069949 | Potato | cytosol | 52.83 | 42.44 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 45.67 | 41.64 |
| GSMUA_Achr10P... | Banana | cytosol | 41.5 | 41.57 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 48.17 | 41.05 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 40.67 | 40.8 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 26.33 | 40.31 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 50.17 | 39.92 |
| Zm00001d034664_P001 | Maize | plastid | 36.67 | 39.36 |
| KXG21080 | Sorghum | cytosol | 41.0 | 39.3 |
| OQU92829 | Sorghum | cytosol | 48.0 | 39.24 |
| Zm00001d028603_P001 | Maize | cytosol | 48.0 | 39.24 |
| KXG38103 | Sorghum | cytosol | 40.83 | 39.14 |
| Os03t0690600-03 | Rice | cytosol | 47.67 | 39.12 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 39.83 | 39.05 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 41.17 | 38.84 |
| Zm00001d011070_P001 | Maize | cytosol | 40.33 | 38.6 |
| KXG21079 | Sorghum | cytosol | 39.83 | 38.36 |
| Zm00001d035671_P001 | Maize | cytosol | 40.0 | 38.34 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 37.0 | 37.25 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 39.5 | 36.8 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 47.0 | 36.34 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 39.67 | 36.34 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 39.67 | 36.23 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 39.67 | 36.23 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 46.83 | 36.21 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 46.67 | 36.18 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 47.17 | 35.96 |
| KXG37250 | Sorghum | cytosol | 38.83 | 35.79 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 46.0 | 34.63 |
| Zm00001d047813_P002 | Maize | nucleus | 47.5 | 34.38 |
| OQU91407 | Sorghum | nucleus | 37.33 | 32.65 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 37.5 | 32.61 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 37.83 | 32.24 |
| Zm00001d035670_P001 | Maize | cytosol | 39.0 | 32.23 |
| EER91260 | Sorghum | nucleus | 38.67 | 32.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.33 | 32.17 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 37.67 | 31.7 |
| Zm00001d033166_P001 | Maize | nucleus | 38.5 | 31.56 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 37.5 | 31.47 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 37.5 | 31.42 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 36.67 | 31.38 |
| EES18880 | Sorghum | cytosol | 38.5 | 31.17 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 36.67 | 31.16 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 37.17 | 31.02 |
| KXG38064 | Sorghum | nucleus | 37.17 | 30.97 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 37.17 | 30.93 |
| EES18882 | Sorghum | cytosol | 37.67 | 30.83 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 37.17 | 30.76 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 36.83 | 30.65 |
| OQU91406 | Sorghum | nucleus | 38.17 | 30.61 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 34.33 | 30.47 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 36.67 | 30.43 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 36.5 | 30.33 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 36.17 | 30.06 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 36.33 | 29.95 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 35.33 | 29.08 |
| VIT_19s0090g01740.t01 | Wine grape | cytosol | 25.33 | 27.89 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 34.67 | 27.48 |
| VIT_00s0463g00020.t01 | Wine grape | nucleus | 23.83 | 26.24 |
| VIT_12s0057g00560.t01 | Wine grape | cytosol | 23.67 | 26.05 |
| VIT_04s0044g01370.t01 | Wine grape | nucleus | 22.17 | 23.42 |
| VIT_19s0014g04940.t01 | Wine grape | cytosol | 22.5 | 23.16 |
| VIT_18s0001g15270.t01 | Wine grape | cytosol, plastid | 20.67 | 21.95 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 18.67 | 19.02 |
Protein Annotations
| MapMan:15.5.12 | ProteinID:CCB56335 | ProteinID:CCB56335.1 | UniProt:F6HNW5 | EMBL:FN595998 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | PFAM:PF03514 |
| PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF44 | InterPro:TF_GRAS | UniParc:UPI0002107FE4 | ArrayExpress:VIT_13s0019g01780 |
| EnsemblPlantsGene:VIT_13s0019g01780 | EnsemblPlants:VIT_13s0019g01780.t01 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr13:+:3173137..3175050
Molecular Weight (calculated)
68462.9 Da
IEP (calculated)
5.973
GRAVY (calculated)
-0.566
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMEEDVEER NCMFQESLAL EATEKLFYDI IREKYLPPDD HQTAPFIEEN SGNSDQNGSI DFSTYSRNAT SDGNCVELGR NFDVGEYKSP HVAPQPTCQS
101: SFSSSSSAKR VPNIFNDSPN NVVDKVKKKH ADEYFRDGWR GKKKSHPWDL ESKEERSSKQ AAFYNGITVT SEMFDRVLLC GPEEDEDALR ETWQNETTKT
201: LQQDGQSKGS GKSHGRTKGG KKDLVDFRSL LTLCAQAVAA DDRTSANKQL RQIRQHASSM GDGMQRLAHY FANSLEARLS GSGAQMYKAI TTKPSAANVL
301: KIYHLLIVVS PFVKVTNFFS NKSIAEVAEK SERLHVIDFG ILYGFSWPSL IQRLSSRPGG PPKLRITGID LPEPGFRPAE RLEETGRRLA DYAKCFNVPF
401: EFNALAQKFE TVQIEDLKLD NDEVLAVRSR YRFGNLPDET VVAESPRDSV LTLIRKMNPD IFILAIVNAA CDTPFFMTRF REALFHYSAL FDMLEENVPH
501: NILERMLLER EVYGQEIMNI IACEGLERIE RPETYKQWQV RNERIGFRQL PLDREVVEEA KEWVKSCLHK DFIIDEDGQW LRLGWKGRIT HAMSSWKPAC
101: SFSSSSSAKR VPNIFNDSPN NVVDKVKKKH ADEYFRDGWR GKKKSHPWDL ESKEERSSKQ AAFYNGITVT SEMFDRVLLC GPEEDEDALR ETWQNETTKT
201: LQQDGQSKGS GKSHGRTKGG KKDLVDFRSL LTLCAQAVAA DDRTSANKQL RQIRQHASSM GDGMQRLAHY FANSLEARLS GSGAQMYKAI TTKPSAANVL
301: KIYHLLIVVS PFVKVTNFFS NKSIAEVAEK SERLHVIDFG ILYGFSWPSL IQRLSSRPGG PPKLRITGID LPEPGFRPAE RLEETGRRLA DYAKCFNVPF
401: EFNALAQKFE TVQIEDLKLD NDEVLAVRSR YRFGNLPDET VVAESPRDSV LTLIRKMNPD IFILAIVNAA CDTPFFMTRF REALFHYSAL FDMLEENVPH
501: NILERMLLER EVYGQEIMNI IACEGLERIE RPETYKQWQV RNERIGFRQL PLDREVVEEA KEWVKSCLHK DFIIDEDGQW LRLGWKGRIT HAMSSWKPAC
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.