Factsheet for HORVU3Hr1G012550.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G012520.1	Barley	cytosol	62.92	82.24
TraesCS3D01G067900.1	Wheat	nucleus	88.93	76.81
TraesCS3A01G068000.1	Wheat	nucleus	88.59	73.74
TraesCS3B01G081100.1	Wheat	nucleus	88.25	73.57
OQU91407	Sorghum	nucleus	60.4	52.48
CDX68389	Canola	cytosol	7.21	50.59
Solyc04g011630.1.1	Tomato	cytosol	14.43	50.59
KXG38064	Sorghum	nucleus	59.56	49.31
OQU91406	Sorghum	nucleus	61.58	49.06
Zm00001d033166_P001	Maize	nucleus	60.23	49.04
EER91260	Sorghum	nucleus	59.06	48.82
VIT_06s0004g04990.t01	Wine grape	cytosol	32.55	43.89
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	23.15	43.53
CDX80265	Canola	endoplasmic reticulum, golgi	22.99	43.22
PGSC0003DMT400005480	Potato	cytosol	31.04	37.99
Bra015584.1-P	Field mustard	cytosol	27.68	37.84
PGSC0003DMT400049420	Potato	cytosol	41.95	37.65
GSMUA_Achr8P02550_001	Banana	nucleus	24.66	37.5
CDY71578	Canola	nucleus, plastid	32.72	37.43
VIT_13s0019g01780.t01	Wine grape	nucleus	37.25	37.0
HORVU1Hr1G004440.1	Barley	cytosol	42.28	35.05
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	41.44	34.84
KRH10240	Soybean	cytosol	35.07	34.49
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	37.25	34.47
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	36.41	34.44
Bra028391.1-P	Field mustard	nucleus	35.4	34.03
CDY47877	Canola	nucleus	35.23	33.98
KRH24780	Soybean	cytosol	37.25	33.64
CDY39530	Canola	cytosol	34.9	33.6
GSMUA_Achr6P34090_001	Banana	nucleus	34.23	33.33
CDY33040	Canola	nucleus	33.22	33.17
PGSC0003DMT400016258	Potato	cytosol	40.44	33.1
VIT_13s0019g01810.t01	Wine grape	cytosol	41.44	33.02
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	37.25	32.99
CDY07777	Canola	cytosol, nucleus, peroxisome	37.25	32.99
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	35.74	32.97
CDX79750	Canola	peroxisome	37.25	32.94
Bra033813.1-P	Field mustard	nucleus	32.05	32.82
KRH29773	Soybean	cytosol	33.72	32.74
Solyc10g086530.1.1	Tomato	cytosol	41.78	32.72
AT3G46600.1	Thale cress	cytosol	31.88	32.59
KRH49113	Soybean	cytosol	40.1	32.56
VIT_06s0004g04970.t01	Wine grape	cytosol	35.91	32.52
KRH29774	Soybean	cytosol	34.4	32.49
KRH65839	Soybean	cytosol, plastid	39.77	32.47
VIT_13s0019g01710.t01	Wine grape	cytosol	39.6	32.46
KRG99969	Soybean	cytosol	40.1	32.43
KRH23095	Soybean	cytosol	35.57	32.27
Solyc09g010920.1.1	Tomato	cytosol	40.94	32.06
VIT_13s0019g01790.t01	Wine grape	cytosol	38.59	31.99
PGSC0003DMT400022997	Potato	cytosol, plastid	40.77	31.93
Solyc05g053090.1.1	Tomato	cytosol	39.77	31.9
HORVU5Hr1G045020.29	Barley	cytosol	42.11	31.89
KRH23094	Soybean	cytosol	29.53	31.83
VIT_06s0004g04980.t01	Wine grape	nucleus	37.58	31.82
CDY06266	Canola	cytosol	33.72	31.8
CDX82987	Canola	nucleus	32.05	31.78
AT2G37650.1	Thale cress	cytosol	38.26	31.75
PGSC0003DMT400069949	Potato	cytosol	39.77	31.73
Solyc06g082530.1.1	Tomato	cytosol	34.73	31.7
Solyc01g100200.2.1	Tomato	nucleus	35.4	31.68
VIT_13s0019g01700.t01	Wine grape	cytosol	40.27	31.58
AT5G59450.1	Thale cress	nucleus	32.21	31.48
CDY47878	Canola	nucleus	36.41	31.4
KRH29775	Soybean	nucleus	35.4	31.35
PGSC0003DMT400078286	Potato	nucleus	34.73	31.03
VIT_06s0004g04950.t01	Wine grape	cytosol	39.26	31.03
Bra028390.1-P	Field mustard	cytosol	36.74	31.02
KRH24773	Soybean	nucleus	35.74	31.0
KRH24775	Soybean	cytosol	35.07	30.74
KRH29771	Soybean	cytosol	34.9	30.59
HORVU4Hr1G027520.2	Barley	cytosol, peroxisome	33.39	30.47
CDX68388	Canola	cytosol	21.14	30.43
CDX86475	Canola	nucleus	36.24	30.42
AT2G29060.1	Thale cress	cytosol	35.23	30.26
GSMUA_AchrUn_...	Banana	cytosol	33.39	30.2
KRH24778	Soybean	nucleus	34.23	30.18
CDX77228	Canola	cytosol	33.89	30.06
Bra031581.1-P	Field mustard	cytosol	33.56	29.94
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	37.25	29.88
HORVU4Hr1G027610.1	Barley	cytosol	33.72	29.69
HORVU4Hr1G027900.1	Barley	cytosol	32.89	29.61
CDY06265	Canola	cytosol	34.23	29.57
KRH29779	Soybean	cytosol	36.74	29.51
KRH10241	Soybean	cytosol, nucleus, peroxisome	34.06	29.51
Bra031580.1-P	Field mustard	cytosol	34.06	29.42
CDY15616	Canola	nucleus	35.23	29.37
Solyc06g076280.1.1	Tomato	cytosol	36.74	29.28
Bra035653.1-P	Field mustard	cytosol	35.4	29.22
HORVU4Hr1G080460.5	Barley	cytosol	28.52	29.21
Bra030688.1-P	Field mustard	nucleus	36.41	29.21
HORVU3Hr1G086210.1	Barley	cytosol, nucleus, plasma membrane	38.76	29.2
AT1G07520.3	Thale cress	cytosol	34.06	29.17
HORVU5Hr1G020900.1	Barley	cytosol	36.41	29.13
CDY31749	Canola	cytosol	35.4	29.06
KRH23089	Soybean	cytosol	31.38	29.04
PGSC0003DMT400077972	Potato	cytosol	36.58	28.99
CDY09912	Canola	cytosol	33.72	28.71
KRH10243	Soybean	nucleus	31.88	28.57
KRH23090	Soybean	vacuole	29.53	28.34
AT1G07530.1	Thale cress	cytosol	36.24	28.09
HORVU4Hr1G027480.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	32.55	27.44
VIT_06s0004g04960.t01	Wine grape	nucleus	35.74	26.73
HORVU4Hr1G027920.1	Barley	peroxisome	33.89	25.47
CDY09911	Canola	nucleus	24.83	25.34
HORVU2Hr1G036280.1	Barley	cytosol	21.81	23.34
HORVU3Hr1G091250.1	Barley	cytosol	20.81	22.46
HORVU4Hr1G071670.1	Barley	cytosol	19.46	21.64
HORVU2Hr1G043780.1	Barley	cytosol	20.47	21.4
HORVU5Hr1G099160.1	Barley	plastid	20.81	19.68
HORVU2Hr1G094040.2	Barley	cytosol, plastid	9.73	15.06

Protein Annotations

EnsemblPlants:HORVU3Hr1G012550.6	EnsemblPlantsGene:HORVU3Hr1G012550	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF60	PFAM:PF03514	PFscan:PS50985	SEG:seg	UniParc:UPI000B488919	UniProt:A0A287K4K2
MapMan:15.5.12	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:27051369..27053158

Molecular Weight (calculated)

68422.5 Da

IEP (calculated)

8.744

GRAVY (calculated)

-0.434

Length

596 amino acids

Sequence
(BLAST)

001: MEEPFYELLG QKYPVLPELL PLCACHRLKN LNGSVSRITG QLCSNCSVNV SSHNYHSNVD SQAFQAPWTL SAIVGEAKQF PLGAERMEIG LNISGLSIAK
101: KPGRDNQSLH MIDKDTIKDA SFEVRGRKVF RGTEELDLLE GRRNKQIAIF PDEPIRNEAF DKVLLCSEHN KPVDEDIILQ QDMADKSTKY PQKDQGRKPA
201: RRMTRGKTRK KKEVVDLRSL LIHCAEAVSV NNRTLASDIL KSIRQHCSPS GDDTQRLAFY LADCLEIRLS GSGSQINQKV ITTPTNAAHI LKLFHLCFTV
301: CPYLRSSYYL SNKTILDVSK GKPRVHIIDF GIFYGFQWPS LLKQFADREG GPPKLRITGI ELPMPGFRPD EMNKNTRLRL TEYANIFQVP LEYRQISSKW
401: ESISIEELNI DKDEVLVVNC ILRMKNVGDE TMSINSARNR VLNTIRMMKP EVFIHGVVNG SYNTPFFLSR FKEVMYHYTS MFDMLEKTTP RDNETRTVLE
501: RDIYKYAILN AIACEGSERI ERPESYKKWN VRSIRARFEQ LPLNPTIVKG IQYMVRQIYH KDFFVDEEDQ CLVLGWKGRI LYALSTWKPS ESVDEG

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.