Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022997 Potato cytosol, plastid 96.85 96.85
Solyc10g086530.1.1 Tomato cytosol 69.65 69.65
Solyc04g011630.1.1 Tomato cytosol 14.06 62.94
VIT_08s0007g00510.t01 Wine grape cytosol, plastid 57.95 62.2
KRH65839 Soybean cytosol, plastid 55.32 57.67
GSMUA_Achr10P... Banana nucleus 33.38 57.47
KRG99969 Soybean cytosol 54.8 56.58
KRH49113 Soybean cytosol 54.01 55.99
GSMUA_Achr10P... Banana cytosol 42.05 53.42
GSMUA_Achr8P02550_001 Banana nucleus 26.81 52.04
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 45.6 51.56
CDX79750 Canola peroxisome 45.6 51.48
CDY07777 Canola cytosol, nucleus, peroxisome 45.34 51.26
AT2G37650.1 Thale cress cytosol 47.57 50.42
GSMUA_Achr7P15080_001 Banana cytosol 39.55 50.33
GSMUA_Achr6P34090_001 Banana nucleus 39.95 49.67
Solyc05g053090.1.1 Tomato cytosol 48.49 49.66
OQU92829 Sorghum cytosol 47.17 48.91
Zm00001d034664_P001 Maize plastid 35.61 48.48
Zm00001d028603_P001 Maize cytosol 46.65 48.37
Os03t0690600-03 Rice cytosol 46.39 48.29
TraesCS1B01G037500.1 Wheat cytosol 25.89 47.7
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 39.16 46.86
HORVU3Hr1G012520.1 Barley cytosol 27.99 46.71
Solyc06g076280.1.1 Tomato cytosol 45.34 46.12
TraesCS5A01G481300.1 Wheat cytosol 39.29 45.65
KXG37250 Sorghum cytosol 39.03 45.62
TraesCS5D01G494900.1 Wheat cytosol 39.03 45.21
TraesCS5B01G494500.1 Wheat cytosol 38.9 45.05
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 38.11 45.03
TraesCS5A01G139000.1 Wheat cytosol, plastid 45.2 44.33
TraesCS5D01G152700.1 Wheat cytosol, plastid 44.94 44.19
KXG38103 Sorghum cytosol 36.27 44.09
TraesCS5B01G138100.1 Wheat cytosol, plastid 44.94 44.07
Zm00001d011070_P001 Maize cytosol 36.14 43.86
GSMUA_AchrUn_... Banana cytosol 37.98 43.85
KXG21080 Sorghum cytosol 36.01 43.77
HORVU5Hr1G045020.29 Barley cytosol 44.81 43.33
KXG21079 Sorghum cytosol 35.22 43.02
Zm00001d047813_P002 Maize nucleus 46.25 42.46
Zm00001d035671_P001 Maize cytosol 34.82 42.33
Solyc06g082530.1.1 Tomato cytosol 36.14 42.11
Solyc01g100200.2.1 Tomato nucleus 36.79 42.04
HORVU3Hr1G012550.6 Barley cytosol 32.06 40.94
TraesCS1B01G037300.1 Wheat cytosol 35.35 38.21
OQU91407 Sorghum nucleus 34.17 37.9
TraesCS1D01G030900.1 Wheat cytosol 35.48 37.87
TraesCS1A01G030300.1 Wheat cytosol 34.95 37.68
TraesCS1D01G030800.1 Wheat cytosol 34.69 37.66
TraesCS3D01G067900.1 Wheat nucleus 34.03 37.54
Zm00001d035670_P001 Maize cytosol 35.74 37.47
HORVU1Hr1G004440.1 Barley cytosol 35.09 37.13
EES18882 Sorghum cytosol 35.61 36.97
TraesCS1B01G037400.1 Wheat cytosol 35.09 36.93
TraesCS1D01G031000.1 Wheat cytosol 34.95 36.69
TraesCS1D01G031200.1 Wheat cytosol 34.95 36.49
KXG38064 Sorghum nucleus 34.43 36.39
TraesCS1A01G030200.1 Wheat cytosol 34.43 36.34
TraesCS3A01G068000.1 Wheat nucleus 34.17 36.31
TraesCS3B01G081100.1 Wheat nucleus 34.03 36.22
Zm00001d033166_P001 Maize nucleus 34.82 36.2
TraesCS3B01G081000.1 Wheat cytosol 34.43 35.99
OQU91406 Sorghum nucleus 35.35 35.96
EER91260 Sorghum nucleus 34.03 35.92
TraesCS3B01G080900.1 Wheat nucleus 33.77 35.64
TraesCS3A01G067900.1 Wheat cytosol 33.77 35.6
TraesCS3D01G067700.1 Wheat cytosol 33.77 35.6
TraesCS3D01G067800.1 Wheat nucleus 31.54 35.5
EES18880 Sorghum cytosol 34.56 35.49
TraesCS1B01G037200.1 Wheat nucleus 33.25 33.42
Solyc06g035620.2.1 Tomato cytosol 12.35 28.83
Solyc07g047950.1.1 Tomato mitochondrion 19.84 27.71
Solyc07g065270.1.1 Tomato nucleus 19.19 27.14
Solyc11g012510.1.1 Tomato mitochondrion 19.05 26.75
Solyc04g014830.1.1 Tomato mitochondrion 19.05 26.22
Solyc12g005340.1.1 Tomato cytosol 18.13 24.73
Solyc07g063940.1.1 Tomato cytosol, nucleus, peroxisome 18.66 24.36
Solyc04g064550.1.1 Tomato mitochondrion 16.29 22.02
Solyc05g054170.2.1 Tomato mitochondrion, nucleus 8.67 19.82
Solyc06g036170.1.1 Tomato nucleus 14.59 18.56
Solyc03g025170.1.1 Tomato nucleus 15.24 18.38
Protein Annotations
MapMan:15.5.12GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565
InterPro:IPR005202UniProt:K4CRB8PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636PANTHER:PTHR31636:SF44
EnsemblPlantsGene:Solyc09g010920.1EnsemblPlants:Solyc09g010920.1.1InterPro:TF_GRASUniParc:UPI000276AF3ASEG:seg:
Description
No Description!
Coordinates
chr9:+:4259085..4261370
Molecular Weight (calculated)
86045.4 Da
IEP (calculated)
6.200
GRAVY (calculated)
-0.507
Length
761 amino acids
Sequence
(BLAST)
001: MDPRFNGHRS SLNNFRFGNQ PLPFSSEQRM INVPRFGLIY SDQNLLNGPR LENNFVQHDF GAVGFISGDH LPTSVESRTD LGVENDFNED IDFSDAVLSY
101: INRMLMEEDM EDKTDMLQES LELQAKEKSL YEALGKKYPP SLEQNVFTVR NSESPDDYVA GSIYNSTSNT GDSSGYLVDP RGVNISTDCN SSYFEGLSFH
201: NTSSLCSSNS GSNVVDGFLD SPVSSFRIPD IYDESRSILN FQKGVEEASK FLPTSNKLLN SIDINGLPSR EPHRQTAYAA AQVEEKDEGE TSPTEGRGKK
301: NPLRGDNNIE EERSSKQAAV FTESTLRSEE FDIVLLNSMG KGGEALEAYQ QNLRNAKSKT TVQISKKSKG GKGRGKKQGG KKEVIDLRTL MINCAQAVAA
401: DDSRIANELL KQIRQHSSPF GDGNQRLAHC FADGLEARLA GTGSQIYKAL VNKRTSAADL LKAYHLYLAS SPFRKISSFA SNKTIMLKAE NATRVHVIDF
501: GILYGFQWPT FIQRIAEREG GPPRLRITGI EFPQPGFRPA ERIEETGRRL ADYARSFNVP FEYHAIAKKW ESITVEDLKL DKDEFLAVNC LYRFKNLHDE
601: TIAVESSRTI VLNLVRKINP DIFVHGIVNG AYSAPFFVTR FREALFHFSA LFDILETIVP REIPERRLIE REIFGREALN VIACEGWERV ERPETYKQWQ
701: ARIMGARFTQ IPFDREEFVN KAIEKVRLGY HRDFVIDEDS QWLLLGWKGR TIYALSCWKP V
Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.