CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91260	Sorghum	nucleus	83.75	83.63
OQU91407	Sorghum	nucleus	66.67	69.97
OQU91406	Sorghum	nucleus	71.11	68.45
HORVU3Hr1G012520.1	Barley	cytosol	40.28	63.6
HORVU3Hr1G012550.6	Barley	cytosol	49.31	59.56
TraesCS3D01G067800.1	Wheat	nucleus	51.94	55.33
TraesCS3D01G067900.1	Wheat	nucleus	52.64	54.93
TraesCS3D01G067700.1	Wheat	cytosol	54.86	54.71
TraesCS3A01G068000.1	Wheat	nucleus	54.31	54.61
TraesCS3B01G081100.1	Wheat	nucleus	53.89	54.27
TraesCS3A01G067900.1	Wheat	cytosol	54.31	54.16
TraesCS3B01G080900.1	Wheat	nucleus	53.19	53.12
TraesCS3B01G081000.1	Wheat	cytosol	52.92	52.34
Solyc04g011630.1.1	Tomato	cytosol	11.53	48.82
CDX68389	Canola	cytosol	5.42	45.88
VIT_06s0004g04990.t01	Wine grape	cytosol	27.08	44.12
KXG38103	Sorghum	cytosol	37.36	42.97
KXG21079	Sorghum	cytosol	37.08	42.86
KXG21080	Sorghum	cytosol	36.67	42.17
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.06	41.01
CDX80265	Canola	endoplasmic reticulum, golgi	17.92	40.69
PGSC0003DMT400005480	Potato	cytosol	27.08	40.04
GSMUA_Achr8P02550_001	Banana	nucleus	21.11	38.78
EES18880	Sorghum	cytosol	39.31	38.19
EES18882	Sorghum	cytosol	38.75	38.06
PGSC0003DMT400049420	Potato	cytosol	34.72	37.65
KRH10240	Soybean	cytosol	31.67	37.62
OQU92829	Sorghum	cytosol	38.19	37.47
Bra015584.1-P	Field mustard	cytosol	22.64	37.39
CDY71578	Canola	nucleus, plastid	26.94	37.24
VIT_13s0019g01780.t01	Wine grape	nucleus	30.97	37.17
GSMUA_Achr6P34090_001	Banana	nucleus	31.39	36.93
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	32.08	36.67
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	35.97	36.53
CDY47877	Canola	nucleus	31.11	36.25
Bra028391.1-P	Field mustard	nucleus	30.97	35.97
CDY39530	Canola	cytosol	30.69	35.7
KRH24780	Soybean	cytosol	32.22	35.15
VIT_06s0004g04970.t01	Wine grape	cytosol	32.08	35.11
KRH23094	Soybean	cytosol	26.67	34.72
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	32.36	34.62
CDY07777	Canola	cytosol, nucleus, peroxisome	32.36	34.62
CDX79750	Canola	peroxisome	32.36	34.57
Solyc10g086530.1.1	Tomato	cytosol	36.53	34.56
Solyc09g010920.1.1	Tomato	cytosol	36.39	34.43
PGSC0003DMT400016258	Potato	cytosol	34.72	34.34
PGSC0003DMT400022997	Potato	cytosol, plastid	36.25	34.3
OQU84115	Sorghum	cytosol	23.19	34.29
OQU83981	Sorghum	cytosol	23.61	34.21
KRH23095	Soybean	cytosol	31.11	34.09
KRH49113	Soybean	cytosol	34.72	34.06
KRH29773	Soybean	cytosol	29.03	34.04
VIT_06s0004g04980.t01	Wine grape	nucleus	33.19	33.95
KRG99969	Soybean	cytosol	34.72	33.92
KRH29774	Soybean	cytosol	29.72	33.91
CDY47878	Canola	nucleus	32.5	33.86
VIT_13s0019g01810.t01	Wine grape	cytosol	35.0	33.69
KXG37250	Sorghum	cytosol	30.42	33.64
OQU84120	Sorghum	nucleus	29.58	33.6
AT3G46600.1	Thale cress	cytosol	27.08	33.45
KXG29228	Sorghum	cytosol	28.75	33.44
Bra028390.1-P	Field mustard	cytosol	32.78	33.43
KRH65839	Soybean	cytosol, plastid	33.89	33.42
CDY06266	Canola	cytosol	29.31	33.39
VIT_13s0019g01710.t01	Wine grape	cytosol	33.61	33.29
Bra033813.1-P	Field mustard	nucleus	26.81	33.16
VIT_06s0004g04950.t01	Wine grape	cytosol	34.58	33.02
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	29.58	32.97
VIT_13s0019g01790.t01	Wine grape	cytosol	32.92	32.96
CDX86475	Canola	nucleus	32.5	32.96
KXG29219	Sorghum	cytosol	31.53	32.95
KRH29775	Soybean	nucleus	30.69	32.84
KRH24775	Soybean	cytosol	30.97	32.79
AT5G59450.1	Thale cress	nucleus	27.78	32.79
CDX77228	Canola	cytosol	30.56	32.74
AT2G37650.1	Thale cress	cytosol	32.64	32.73
OQU84111	Sorghum	cytosol	30.56	32.64
KRH24773	Soybean	nucleus	31.11	32.61
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.61	32.57
KRH24778	Soybean	nucleus	30.56	32.54
PGSC0003DMT400077972	Potato	cytosol	33.89	32.45
CDX82987	Canola	nucleus	27.08	32.45
AT2G29060.1	Thale cress	cytosol	31.25	32.42
KRH10241	Soybean	cytosol, nucleus, peroxisome	30.97	32.41
Solyc05g053090.1.1	Tomato	cytosol	33.33	32.3
KRH29771	Soybean	cytosol	30.42	32.21
CDY33040	Canola	nucleus	26.67	32.16
OQU84114	Sorghum	mitochondrion	21.39	32.15
Solyc06g076280.1.1	Tomato	cytosol	33.33	32.09
OQU84113	Sorghum	cytosol, nucleus, plastid	28.47	32.08
OQU84105	Sorghum	cytosol	32.5	32.05
Solyc06g082530.1.1	Tomato	cytosol	29.03	32.01
PGSC0003DMT400069949	Potato	cytosol	33.19	31.99
Bra035653.1-P	Field mustard	cytosol	31.94	31.86
VIT_13s0019g01700.t01	Wine grape	cytosol	33.61	31.84
Solyc01g100200.2.1	Tomato	nucleus	29.44	31.83
KRH29779	Soybean	cytosol	32.78	31.81
CDY31749	Canola	cytosol	31.94	31.68
EES01740	Sorghum	cytosol	35.42	31.6
Bra031581.1-P	Field mustard	cytosol	29.31	31.59
KRH10243	Soybean	nucleus	29.17	31.58
KXG26392	Sorghum	cytosol	27.78	31.55
EES16206	Sorghum	cytosol	31.94	31.51
Bra030688.1-P	Field mustard	nucleus	32.5	31.49
GSMUA_AchrUn_...	Banana	cytosol	28.75	31.41
OQU84116	Sorghum	nucleus	26.94	31.34
PGSC0003DMT400078286	Potato	nucleus	29.03	31.33
CDY15616	Canola	nucleus	31.11	31.33
CDY06265	Canola	cytosol	30.0	31.3
Bra031580.1-P	Field mustard	cytosol	29.86	31.16
AT1G07520.3	Thale cress	cytosol	29.86	30.89
OQU84112	Sorghum	cytosol	30.56	30.68
CDX68388	Canola	cytosol	17.64	30.68
KRH23090	Soybean	vacuole	26.39	30.6
OQU90003	Sorghum	cytosol	32.64	30.44
KRH23089	Soybean	cytosol	27.22	30.43
CDY09912	Canola	cytosol	29.58	30.43
KXG29232	Sorghum	cytosol	28.33	30.0
KXG29223	Sorghum	cytosol	29.58	29.96
KXG29224	Sorghum	nucleus	28.75	29.87
VIT_06s0004g04960.t01	Wine grape	nucleus	33.06	29.86
OQU83978	Sorghum	mitochondrion	26.25	29.86
OQU83979	Sorghum	plastid	25.14	29.82
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	26.11	29.61
EES09053	Sorghum	cytosol	26.11	29.38
OQU83980	Sorghum	cytosol	25.28	29.31
AT1G07530.1	Thale cress	cytosol	31.25	29.26
OQU81651	Sorghum	cytosol	28.33	29.14
CDY09911	Canola	nucleus	22.78	28.08
KXG36217	Sorghum	cytosol	32.36	28.07
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	30.97	27.7
EER97449	Sorghum	cytosol	20.28	26.69
EER95348	Sorghum	cytosol	18.06	24.25
EES18257	Sorghum	cytosol	18.47	23.62
KXG33821	Sorghum	cytosol	18.47	23.37
EER97346	Sorghum	cytosol	17.64	22.28
EES05727	Sorghum	cytosol	15.14	17.33
EES12703	Sorghum	cytosol, nucleus, plastid	14.17	15.64

Protein Annotations

MapMan:15.5.12	UniProt:A0A1B6QJH3	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	EnsemblPlants:KXG38064	ProteinID:KXG38064
ProteinID:KXG38064.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60	EnsemblPlantsGene:SORBI_3001G174200
InterPro:TF_GRAS	UniParc:UPI00081AB67C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:14653110..14655930

Molecular Weight (calculated)

81441.7 Da

IEP (calculated)

7.139

GRAVY (calculated)

-0.461

Length

720 amino acids

Sequence
(BLAST)

001: MESKDKPNSS FEDSPSAMVN NPGCYATSQI FIDDPTNRHN DLDLESCLHT PNSNYPPVSS SSNSNVHVAS STSSSTKIYG PHPCEVSSNV KSDWYGANAT
101: DYSANSWITS DITLDYINKL LMQEDNDDTV KLHHGEHALR SMEEPFYKLL GQNNPVYPQQ LPLCNCDHLK NIDDSISKSC SICSVAIDSS TSHSNHNLQV
201: FEAPWSLSDI VTQGTHSVEL GLNVDGLSIA EKRSRDDQSL QVHVADKIKH ALSEVHDGNY SRTEDFQLLE GRSSKQFAVS INGATRDEML DRVLLFSEHK
301: LTDEGIVLQE MMANKSTRNS KNVQGRTSAC RKTRIKKQHK KEVVDLRTLL IHCAKAVSVN KYTLARDTLN IIRQHSSVSG DDTQRLASCL VECLEVRLAG
401: TGGQLYHKLM TETCNAVDTL KVYQLALAVS PFMRAPYYFS NKTILDVSKG KPKVHIIDFG ICFGFQWPSL FEQLARREDG PPKVRITGIE LPQPGFRPNQ
501: INKNAGQLLA DYASMFNVPF EYKGISSKWE TIRIQDLNIE EDDVLIVNCL FRMKNIVDET VELNNARNRL LNTIRKMKPK VFVHGVVNGS FSNPFFLPRF
601: KEVMHHYSAL FDILDRTVPR DNEARMILER HIYLRAILNA VACEGSERIE RPECYKKWKS RNLKAGLEQL PLNPDIVKVI RDMVGQYHKD YVINEDDQWL
701: VLGWKGKILK AISTWKPSES

Best Arabidopsis Sequence Match ( AT2G29060.1 )
(BLAST)

001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL

Arabidopsis Description

SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.