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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31749 Canola cytosol 99.17 98.62
AT2G29060.1 Thale cress cytosol 71.05 73.92
Bra028390.1-P Field mustard cytosol 71.75 73.37
Bra030688.1-P Field mustard nucleus 61.36 59.62
KRH24780 Soybean cytosol 46.68 51.06
VIT_06s0004g04950.t01 Wine grape cytosol 49.17 47.08
GSMUA_Achr10P... Banana nucleus 28.81 47.06
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 20.5 46.69
KRH29779 Soybean cytosol 46.81 45.55
GSMUA_Achr8P02550_001 Banana nucleus 23.96 44.13
VIT_06s0004g04960.t01 Wine grape nucleus 47.65 43.16
GSMUA_Achr10P... Banana cytosol 35.46 42.74
TraesCS1B01G037500.1 Wheat cytosol 24.38 42.62
GSMUA_Achr7P15080_001 Banana cytosol 34.76 41.97
KRH10243 Soybean nucleus 38.64 41.95
Bra028391.1-P Field mustard nucleus 35.73 41.61
HORVU3Hr1G012520.1 Barley cytosol 26.04 41.23
KRH23090 Soybean vacuole 35.46 41.22
KRH23089 Soybean cytosol 36.7 41.15
Zm00001d034664_P001 Maize plastid 31.44 40.61
Bra015584.1-P Field mustard cytosol 24.52 40.6
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 37.53 40.27
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 35.32 40.09
GSMUA_Achr6P34090_001 Banana nucleus 33.93 40.03
KXG38103 Sorghum cytosol 34.63 39.94
OQU92829 Sorghum cytosol 40.58 39.92
Os03t0690600-03 Rice cytosol 39.75 39.26
Zm00001d028603_P001 Maize cytosol 39.89 39.24
Bra031581.1-P Field mustard cytosol 35.73 38.62
KXG21079 Sorghum cytosol 33.24 38.52
Zm00001d035671_P001 Maize cytosol 32.83 37.86
KXG37250 Sorghum cytosol 34.07 37.79
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 33.52 37.58
Zm00001d011070_P001 Maize cytosol 32.55 37.48
TraesCS5B01G494500.1 Wheat cytosol 34.07 37.44
TraesCS5D01G494900.1 Wheat cytosol 34.07 37.44
TraesCS5A01G481300.1 Wheat cytosol 33.93 37.4
KXG21080 Sorghum cytosol 32.27 37.22
Bra033813.1-P Field mustard nucleus 29.36 36.43
Bra031580.1-P Field mustard cytosol 34.76 36.38
TraesCS5D01G152700.1 Wheat cytosol, plastid 38.23 35.66
TraesCS5A01G139000.1 Wheat cytosol, plastid 38.23 35.57
TraesCS5B01G138100.1 Wheat cytosol, plastid 38.09 35.44
HORVU3Hr1G012550.6 Barley cytosol 29.22 35.4
HORVU5Hr1G045020.29 Barley cytosol 38.37 35.2
Zm00001d047813_P002 Maize nucleus 40.03 34.86
GSMUA_AchrUn_... Banana cytosol 31.44 34.45
EER91260 Sorghum nucleus 33.1 33.15
OQU91407 Sorghum nucleus 30.89 32.51
TraesCS3D01G067900.1 Wheat nucleus 31.02 32.46
TraesCS3D01G067800.1 Wheat nucleus 30.33 32.4
TraesCS1B01G037300.1 Wheat cytosol 31.58 32.39
TraesCS3D01G067700.1 Wheat cytosol 32.13 32.13
TraesCS3A01G067900.1 Wheat cytosol 32.13 32.13
HORVU1Hr1G004440.1 Barley cytosol 31.86 31.99
KXG38064 Sorghum nucleus 31.86 31.94
TraesCS3B01G080900.1 Wheat nucleus 31.86 31.9
Zm00001d033166_P001 Maize nucleus 32.27 31.83
TraesCS1D01G030800.1 Wheat cytosol 30.89 31.81
TraesCS3A01G068000.1 Wheat nucleus 31.44 31.7
Bra026077.1-P Field mustard cytosol 12.88 31.63
TraesCS1A01G030300.1 Wheat cytosol 30.89 31.59
TraesCS1D01G030900.1 Wheat cytosol 31.02 31.42
EES18882 Sorghum cytosol 31.72 31.24
TraesCS3B01G081100.1 Wheat nucleus 30.89 31.19
TraesCS3B01G081000.1 Wheat cytosol 31.44 31.18
OQU91406 Sorghum nucleus 32.27 31.15
TraesCS1D01G031200.1 Wheat cytosol 31.3 31.0
TraesCS1D01G031000.1 Wheat cytosol 31.02 30.9
Bra015156.1-P Field mustard cytosol 13.57 30.82
Zm00001d035670_P001 Maize cytosol 30.89 30.72
TraesCS1B01G037400.1 Wheat cytosol 30.75 30.71
TraesCS1A01G030200.1 Wheat cytosol 30.47 30.51
EES18880 Sorghum cytosol 30.89 30.09
TraesCS1B01G037200.1 Wheat nucleus 30.06 28.67
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 15.24 26.96
Bra020715.1-P Field mustard cytosol, plastid 18.42 26.76
Bra036185.1-P Field mustard cytosol 18.28 26.67
Bra018860.1-P Field mustard nucleus 18.98 26.1
Bra021063.1-P Field mustard plastid 18.28 24.91
Bra026237.1-P Field mustard plastid 18.28 24.67
Bra012280.1-P Field mustard cytosol 17.31 22.77
Bra028312.1-P Field mustard cytosol 13.57 21.59
Bra022596.1-P Field mustard plastid 14.82 18.48
Protein Annotations
EnsemblPlants:Bra035653.1EnsemblPlants:Bra035653.1-PEnsemblPlantsGene:Bra035653GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRAS
PANTHER:PTHR31636PANTHER:PTHR31636:SF132PFAM:PF03514PFscan:PS50985SEG:segUniParc:UPI0002544227
UniProt:M4F3K3MapMan:15.5.12::::
Description
AT2G29060 (E=9e-272) | scarecrow transcription factor family protein
Coordinates
chrA04:+:13067489..13069657
Molecular Weight (calculated)
82257.1 Da
IEP (calculated)
6.793
GRAVY (calculated)
-0.544
Length
722 amino acids
Sequence
(BLAST)
001: MGSYSAGFPG SFDNFHYNYK IDFSNFGNGL YLDDQPFLRS PSPFPPLPLP PLHPPPHPEP CSQQNLPADA DVDADDDCTD SVLQYISQVL MEEDMDDKPC
101: MFHDALSLQA AERSLYEALG EKYPDSTRPV QLSHSPDELS DITSSGYTSR TTTTTTTSSD WSFDSLENSR PSWMQTPIPK NFVFQSTPST RSSPNSGRNT
201: GIRSSSSNDL VSNMFKDSSW ALQFKKGVEE ASKFLPKSTQ LVIDVENDHH YVPYRITGEK YHWREDEHLP EERSKKQPAV YADDPELSEM FDKILLFGDP
301: KENPKCILNE TSQKEPPKAS PSPKGETTTY PRGQKPTAYV QEIPDLRSLL LSCAQAVSVN DHRRAEGLLR LVRQHSSSYG DGTERLAHYF ANSLEARLAG
401: TGTQVYTALS SKKTSAADML KAYQTYVSVC PFKKIGIVFA NHTIQQLVKK TMPDTIHIID FGISYGFQWH SLVHRLAWRR GSSCKLRITG IDLPQRGFRP
501: ANGVIETGHR LAKYCKKFNV PFEYNAIAQK WETIKLEDLK LKEGEFVAVN SLFRFRNLLD ETVAVDSPRD VVLRLIQKIK PNIFIPSILS GSYNAPFFVT
601: RFREVLYHFS SLFDMCDTTL TREDPMRVVF EKEFYGREIM NVVACEGTAR VERPESYKQW QGRMVRAGFR QLPVEKELVQ KLRLMVDKEY KSKEFDVDQD
701: GNWFLQGWKG RLVYASSFWV SV
Best Arabidopsis Sequence Match ( AT2G29060.1 )
(BLAST)
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.