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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06266 Canola cytosol 92.07 97.31
CDY09911 Canola nucleus 69.76 79.79
Bra031580.1-P Field mustard cytosol 80.99 78.41
AT1G07520.3 Thale cress cytosol 75.6 72.56
Bra015584.1-P Field mustard cytosol 47.01 72.02
Bra028391.1-P Field mustard nucleus 57.19 61.61
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 21.86 46.06
PGSC0003DMT400005480 Potato cytosol 33.23 45.59
KRH29773 Soybean cytosol 41.77 45.44
KRH29774 Soybean cytosol 41.77 44.22
KRH24778 Soybean nucleus 43.26 42.75
KRH29775 Soybean nucleus 42.81 42.5
KRH24775 Soybean cytosol 42.37 41.62
GSMUA_Achr10P... Banana nucleus 27.4 41.4
KRH23091 Soybean endoplasmic reticulum, plasma membrane 45.21 40.65
Solyc06g076280.1.1 Tomato cytosol 44.76 39.97
HORVU3Hr1G012520.1 Barley cytosol 27.1 39.69
PGSC0003DMT400077972 Potato cytosol 44.46 39.49
KRH10241 Soybean cytosol, nucleus, peroxisome 40.12 38.95
Bra030688.1-P Field mustard nucleus 42.66 38.36
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 36.38 38.21
GSMUA_Achr10P... Banana cytosol 33.98 37.9
Zm00001d034664_P001 Maize plastid 31.44 37.57
Bra033813.1-P Field mustard nucleus 32.63 37.46
Bra028390.1-P Field mustard cytosol 39.52 37.39
TraesCS1B01G037500.1 Wheat cytosol 22.6 36.56
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 35.03 36.34
GSMUA_Achr7P15080_001 Banana cytosol 32.34 36.12
TraesCS5B01G494500.1 Wheat cytosol 35.18 35.77
Bra035653.1-P Field mustard cytosol 38.62 35.73
TraesCS5A01G481300.1 Wheat cytosol 35.03 35.73
TraesCS5D01G494900.1 Wheat cytosol 35.03 35.62
KXG21080 Sorghum cytosol 33.23 35.46
GSMUA_Achr6P34090_001 Banana nucleus 32.19 35.13
KXG38103 Sorghum cytosol 32.63 34.82
KXG37250 Sorghum cytosol 33.68 34.56
GSMUA_Achr8P02550_001 Banana nucleus 20.21 34.44
Os03t0690600-03 Rice cytosol 37.57 34.34
Zm00001d011070_P001 Maize cytosol 32.19 34.29
Zm00001d028603_P001 Maize cytosol 37.43 34.06
OQU92829 Sorghum cytosol 37.28 33.92
KXG21079 Sorghum cytosol 31.59 33.87
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 33.83 33.58
HORVU3Hr1G012550.6 Barley cytosol 29.94 33.56
Zm00001d035671_P001 Maize cytosol 31.44 33.55
Bra026077.1-P Field mustard cytosol 14.37 32.65
TraesCS5A01G139000.1 Wheat cytosol, plastid 36.83 31.7
TraesCS5D01G152700.1 Wheat cytosol, plastid 36.68 31.65
HORVU5Hr1G045020.29 Barley cytosol 37.28 31.64
TraesCS5B01G138100.1 Wheat cytosol, plastid 36.68 31.57
TraesCS3D01G067900.1 Wheat nucleus 32.19 31.16
GSMUA_AchrUn_... Banana cytosol 29.79 30.2
Zm00001d047813_P002 Maize nucleus 37.43 30.16
TraesCS3A01G068000.1 Wheat nucleus 32.04 29.89
Bra015156.1-P Field mustard cytosol 14.22 29.87
TraesCS3B01G081100.1 Wheat nucleus 31.89 29.79
EER91260 Sorghum nucleus 31.89 29.54
OQU91407 Sorghum nucleus 30.24 29.45
KXG38064 Sorghum nucleus 31.59 29.31
TraesCS1D01G030800.1 Wheat cytosol 30.69 29.24
TraesCS3D01G067700.1 Wheat cytosol 31.59 29.22
TraesCS3B01G080900.1 Wheat nucleus 31.14 28.85
Zm00001d033166_P001 Maize nucleus 31.59 28.83
TraesCS1D01G030900.1 Wheat cytosol 30.69 28.75
TraesCS1A01G030300.1 Wheat cytosol 30.24 28.61
OQU91406 Sorghum nucleus 32.04 28.61
TraesCS1B01G037300.1 Wheat cytosol 29.94 28.41
TraesCS1B01G037400.1 Wheat cytosol 30.69 28.35
TraesCS3B01G081000.1 Wheat cytosol 30.84 28.3
TraesCS3A01G067900.1 Wheat cytosol 30.54 28.25
TraesCS3D01G067800.1 Wheat nucleus 28.59 28.25
HORVU1Hr1G004440.1 Barley cytosol 30.39 28.23
Zm00001d035670_P001 Maize cytosol 30.54 28.1
TraesCS1A01G030200.1 Wheat cytosol 30.24 28.02
TraesCS1D01G031000.1 Wheat cytosol 29.94 27.59
TraesCS1D01G031200.1 Wheat cytosol 29.94 27.43
EES18882 Sorghum cytosol 30.09 27.42
EES18880 Sorghum cytosol 30.24 27.26
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 16.47 26.96
TraesCS1B01G037200.1 Wheat nucleus 29.19 25.76
Bra018860.1-P Field mustard nucleus 20.06 25.52
Bra021063.1-P Field mustard plastid 19.76 24.91
Bra020715.1-P Field mustard cytosol, plastid 18.26 24.55
Bra026237.1-P Field mustard plastid 19.61 24.49
Bra036185.1-P Field mustard cytosol 17.96 24.24
Bra012280.1-P Field mustard cytosol 18.71 22.77
Bra028312.1-P Field mustard cytosol 14.97 22.03
Bra022596.1-P Field mustard plastid 16.32 18.83
Protein Annotations
EnsemblPlants:Bra031581.1EnsemblPlants:Bra031581.1-PEnsemblPlantsGene:Bra031581GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRAS
PANTHER:PTHR31636PANTHER:PTHR31636:SF129PFAM:PF03514PFscan:PS50985SEG:segUniParc:UPI00025433DC
UniProt:M4ES03MapMan:15.5.12::::
Description
AT1G07520 (E=9e-210) | scarecrow transcription factor family protein
Coordinates
chrA09:+:35720704..35722710
Molecular Weight (calculated)
76692.5 Da
IEP (calculated)
5.653
GRAVY (calculated)
-0.544
Length
668 amino acids
Sequence
(BLAST)
001: MMESNFYGMV NGYEYYDVSY LPNQTPNLGF GVPSSSDFDL RLDRIQIQPS IWVPSIQQDQ DSPPAAADEI DSENTLLKYV NQLLMEEETL AENQTLSYDS
101: LALRQTEKML QQVITDSQTQ SPYISTSSSN SSGCDCGGEY FNSYSDSCVR FKTRTTNSTK VVSFQGSYML QQPANKIMFS DADSVNQFKR GVEEASKFLP
201: NTDQWIFNQD DKGYTSRVRK HHHQRDQEED EEARMSKQSA PNVDDGKLTE MFDKVLLLDN QLDPQINDNV SSKAPAASKK ERVQAVDFRT LLILCAQSIS
301: SGDMITSVDL LRQIRNQSSP LGDASQRLAH FFANALEARL QGSSGGVIQS YYDAVTSKKR TAAQILKSYK TFLSASPFMT LMYFYSNKMI LDAAKDASVL
401: HVIDFGILYG FQWPMFIQRI SESKNGPRKL RITGVELPQN GFRPTEKLED TGRRLREYCK RFGVPFEYNA IASKNWETIR LEEFKIRPNE VLAVNAVLRF
501: KNLRDVTPGE EDCPREGFLK LIRDMKPDVV LNSTVNGSFN ASFFTTRFKE ALFHYTAVFD MFGSTLSREN PERMHFEEVF YGREVMNVIA CEGVDRVERP
601: ETYKQWQVRM MRAGFKQKPV ETELVESFRE KMKRWGYHKD FVLDEDSNWF LQGWKGRILY SSSCWVLS
Best Arabidopsis Sequence Match ( AT1G07520.3 )
(BLAST)
001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.