Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077972 | Potato | cytosol | 67.56 | 43.75 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 36.55 | 43.1 |
| Bra015584.1-P | Field mustard | cytosol | 37.37 | 41.74 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 38.4 | 41.01 |
| KRH29773 | Soybean | cytosol | 49.69 | 39.41 |
| CDY47877 | Canola | nucleus | 48.46 | 38.19 |
| Bra028391.1-P | Field mustard | nucleus | 48.46 | 38.06 |
| KRH29774 | Soybean | cytosol | 49.28 | 38.03 |
| CDY39530 | Canola | cytosol | 48.25 | 37.96 |
| Zm00001d034664_P001 | Maize | plastid | 43.33 | 37.75 |
| KRH29775 | Soybean | nucleus | 51.95 | 37.59 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 48.46 | 37.46 |
| KRH24778 | Soybean | nucleus | 51.33 | 36.98 |
| GSMUA_Achr10P... | Banana | nucleus | 33.47 | 36.88 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 47.02 | 36.01 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 47.64 | 35.91 |
| GSMUA_Achr10P... | Banana | cytosol | 43.94 | 35.73 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 53.8 | 35.26 |
| PGSC0003DMT400049420 | Potato | cytosol | 48.05 | 35.24 |
| KRH24775 | Soybean | cytosol | 49.08 | 35.15 |
| CDY06266 | Canola | cytosol | 45.59 | 35.13 |
| KXG37250 | Sorghum | cytosol | 46.82 | 35.02 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 48.25 | 34.16 |
| PGSC0003DMT400016258 | Potato | cytosol | 50.51 | 33.79 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 44.97 | 33.44 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 44.15 | 33.39 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 44.97 | 33.33 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 44.97 | 33.33 |
| Bra031581.1-P | Field mustard | cytosol | 45.59 | 33.23 |
| KXG38103 | Sorghum | cytosol | 42.3 | 32.91 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 41.27 | 32.84 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 40.25 | 32.78 |
| KXG21080 | Sorghum | cytosol | 42.09 | 32.75 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 51.13 | 32.72 |
| PGSC0003DMT400078286 | Potato | nucleus | 44.76 | 32.68 |
| KXG21079 | Sorghum | cytosol | 41.68 | 32.58 |
| Zm00001d035671_P001 | Maize | cytosol | 41.68 | 32.43 |
| Zm00001d028603_P001 | Maize | cytosol | 48.67 | 32.29 |
| Zm00001d011070_P001 | Maize | cytosol | 41.48 | 32.22 |
| AT1G07520.3 | Thale cress | cytosol | 45.79 | 32.04 |
| Bra031580.1-P | Field mustard | cytosol | 45.38 | 32.03 |
| CDY06265 | Canola | cytosol | 45.38 | 32.03 |
| Os03t0690600-03 | Rice | cytosol | 48.05 | 32.01 |
| OQU92829 | Sorghum | cytosol | 48.05 | 31.88 |
| CDY09912 | Canola | cytosol | 45.59 | 31.71 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 25.46 | 31.63 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 37.99 | 31.04 |
| PGSC0003DMT400069949 | Potato | cytosol | 47.02 | 30.66 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 46.82 | 29.46 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 46.82 | 29.38 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 46.61 | 29.25 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 46.41 | 28.72 |
| Zm00001d047813_P002 | Maize | nucleus | 48.25 | 28.35 |
| CDY09911 | Canola | nucleus | 33.68 | 28.08 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 40.45 | 27.98 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 40.45 | 27.9 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 40.04 | 27.82 |
| EER91260 | Sorghum | nucleus | 41.07 | 27.74 |
| OQU91407 | Sorghum | nucleus | 38.6 | 27.41 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 40.45 | 27.25 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 39.84 | 27.21 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 38.4 | 27.1 |
| KXG38064 | Sorghum | nucleus | 40.04 | 27.08 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.55 | 27.01 |
| Zm00001d035670_P001 | Maize | cytosol | 40.25 | 27.0 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 39.84 | 26.98 |
| EES18882 | Sorghum | cytosol | 40.45 | 26.88 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 39.84 | 26.87 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 39.22 | 26.49 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 38.81 | 26.43 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 39.22 | 26.24 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 38.4 | 26.12 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 38.81 | 26.07 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 39.01 | 26.06 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 38.6 | 26.04 |
| Zm00001d033166_P001 | Maize | nucleus | 39.01 | 25.96 |
| OQU91406 | Sorghum | nucleus | 39.63 | 25.8 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 38.19 | 25.8 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 35.73 | 25.74 |
| PGSC0003DMT400057111 | Potato | nucleus | 28.13 | 25.51 |
| EES18880 | Sorghum | cytosol | 38.6 | 25.37 |
| PGSC0003DMT400015696 | Potato | cytosol | 27.52 | 25.05 |
| PGSC0003DMT400056120 | Potato | cytosol | 28.54 | 24.87 |
| PGSC0003DMT400049492 | Potato | cytosol | 29.57 | 24.74 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 38.4 | 24.7 |
| PGSC0003DMT400060553 | Potato | cytosol | 26.28 | 24.43 |
| PGSC0003DMT400034763 | Potato | cytosol | 26.28 | 23.97 |
| PGSC0003DMT400021748 | Potato | nucleus | 26.28 | 22.9 |
| PGSC0003DMT400063944 | Potato | cytosol, mitochondrion | 24.44 | 21.29 |
| PGSC0003DMT400076932 | Potato | nucleus | 19.71 | 15.84 |
| PGSC0003DMT400026240 | Potato | nucleus, plastid | 20.94 | 15.6 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400005480 | EnsemblPlantsGene:PGSC0003DMG400002139 | EntrezGene:102585418 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF129 | PFAM:PF03514 | PFscan:PS50985 | PGSC:PGSC0003DMG400002139 | RefSeq:XP_015169567.1 |
| SEG:seg | UniParc:UPI00029623B3 | UniProt:M0ZPY5 | MapMan:15.5.12 | : | : |
Description
GRAS family transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400002139]
Coordinates
chr6:-:4675958..4679240
Molecular Weight (calculated)
55146.8 Da
IEP (calculated)
5.261
GRAVY (calculated)
-0.272
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPSNKTPD SANTSKLEDQ IVLSSFDQPL NPPHCDKDER SDKQSAKYAE EVELTEIFDM VLLCTCAKAK KVSCDISSEI SSEVEKSPKN AALDLRTLLI
101: ICAQFVASGD QESASEMLKQ IRQESSPTGD AYQRLASVFA DGLVARLSRD GATLSKGGSI EFLALPMSLP YAALTPKRMT DTADNLKAYH VHLSSCPFIK
201: VSISFANKMI FHTARNATTL HIIDFGILYG FQWPILIQHL SVMPGGPPKL RITGINLPQP GFRPAEETGR LLARYCERFN VPFEYNAIVI QNWERIEIKD
301: LKLESGEFVA VNCLFRFENL SDETVDVECP RDAVLSLIQK MNPDIFVQGV TNGSYNSPFF VTRFQEALLH YSALFDMFDA TLPRDNQQRL HFEQELYRRE
401: AMNVIACEGA ERVERPETYE QWQVRNVRAG FKILPLNQEV MKTLKDNVEA GYHRDFVLYE DGNWMVQGWK DRIICASSCW IPLHRSC
101: ICAQFVASGD QESASEMLKQ IRQESSPTGD AYQRLASVFA DGLVARLSRD GATLSKGGSI EFLALPMSLP YAALTPKRMT DTADNLKAYH VHLSSCPFIK
201: VSISFANKMI FHTARNATTL HIIDFGILYG FQWPILIQHL SVMPGGPPKL RITGINLPQP GFRPAEETGR LLARYCERFN VPFEYNAIVI QNWERIEIKD
301: LKLESGEFVA VNCLFRFENL SDETVDVECP RDAVLSLIQK MNPDIFVQGV TNGSYNSPFF VTRFQEALLH YSALFDMFDA TLPRDNQQRL HFEQELYRRE
401: AMNVIACEGA ERVERPETYE QWQVRNVRAG FKILPLNQEV MKTLKDNVEA GYHRDFVLYE DGNWMVQGWK DRIICASSCW IPLHRSC
001: MLRGGEQFGQ PANEILVRSM FSDAESVLQF KRGLEEASKF LPNTDQWIFN LEPEMERVVP VKVEEGWSAI SKTRKNHHER EEEEDDLEEA RRRSKQFAVN
101: EEDGKLTEMF DKVLLLDGEC DPQIIEDGEN GSSKALVKKG RAKKKSRAVD FRTLLTLCAQ SVSAGDKITA DDLLRQIRKQ CSPVGDASQR LAHFFANALE
201: ARLEGSTGTM IQSYYDSISS KKRTAAQILK SYSVFLSASP FMTLIYFFSN KMILDAAKDA SVLHIVDFGI LYGFQWPMFI QHLSKSNPGL RKLRITGIEI
301: PQHGLRPTER IQDTGRRLTE YCKRFGVPFE YNAIASKNWE TIKMEEFKIR PNEVLAVNAV LRFKNLRDVI PGEEDCPRDG FLKLIRDMNP NVFLSSTVNG
401: SFNAPFFTTR FKEALFHYSA LFDLFGATLS KENPERIHFE GEFYGREVMN VIACEGVDRV ERPETYKQWQ VRMIRAGFKQ KPVEAELVQL FREKMKKWGY
501: HKDFVLDEDS NWFLQGWKGR ILFSSSCWVP S
101: EEDGKLTEMF DKVLLLDGEC DPQIIEDGEN GSSKALVKKG RAKKKSRAVD FRTLLTLCAQ SVSAGDKITA DDLLRQIRKQ CSPVGDASQR LAHFFANALE
201: ARLEGSTGTM IQSYYDSISS KKRTAAQILK SYSVFLSASP FMTLIYFFSN KMILDAAKDA SVLHIVDFGI LYGFQWPMFI QHLSKSNPGL RKLRITGIEI
301: PQHGLRPTER IQDTGRRLTE YCKRFGVPFE YNAIASKNWE TIKMEEFKIR PNEVLAVNAV LRFKNLRDVI PGEEDCPRDG FLKLIRDMNP NVFLSSTVNG
401: SFNAPFFTTR FKEALFHYSA LFDLFGATLS KENPERIHFE GEFYGREVMN VIACEGVDRV ERPETYKQWQ VRMIRAGFKQ KPVEAELVQL FREKMKKWGY
501: HKDFVLDEDS NWFLQGWKGR ILFSSSCWVP S
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.