Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028391.1-P | Field mustard | nucleus | 99.68 | 99.35 |
| CDY39530 | Canola | cytosol | 94.34 | 94.18 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 79.13 | 77.62 |
| CDY06266 | Canola | cytosol | 61.33 | 59.97 |
| CDY06265 | Canola | cytosol | 64.4 | 57.68 |
| CDY09912 | Canola | cytosol | 63.43 | 56.0 |
| CDX68389 | Canola | cytosol | 7.44 | 54.12 |
| CDY09911 | Canola | nucleus | 50.65 | 53.6 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 25.08 | 48.9 |
| PGSC0003DMT400005480 | Potato | cytosol | 38.19 | 48.46 |
| KRH29773 | Soybean | cytosol | 44.17 | 44.46 |
| CDY71578 | Canola | nucleus, plastid | 36.73 | 43.57 |
| GSMUA_Achr10P... | Banana | nucleus | 30.91 | 43.21 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 31.88 | 43.2 |
| KRH29775 | Soybean | nucleus | 46.28 | 42.5 |
| KRH24778 | Soybean | nucleus | 46.28 | 42.31 |
| KRH29774 | Soybean | cytosol | 43.04 | 42.16 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 49.51 | 41.18 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 27.51 | 41.16 |
| Solyc06g076280.1.1 | Tomato | cytosol | 49.68 | 41.04 |
| PGSC0003DMT400077972 | Potato | cytosol | 49.35 | 40.56 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 45.15 | 40.55 |
| KRH24775 | Soybean | cytosol | 44.5 | 40.44 |
| CDX86475 | Canola | nucleus | 45.95 | 40.0 |
| GSMUA_Achr10P... | Banana | cytosol | 38.35 | 39.57 |
| CDY47878 | Canola | nucleus | 43.53 | 38.93 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 39.81 | 38.68 |
| CDY15616 | Canola | nucleus | 44.34 | 38.32 |
| Zm00001d034664_P001 | Maize | plastid | 34.63 | 38.28 |
| KXG38103 | Sorghum | cytosol | 38.67 | 38.18 |
| KXG21080 | Sorghum | cytosol | 37.86 | 37.38 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 36.08 | 37.29 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 23.62 | 37.24 |
| CDY33040 | Canola | nucleus | 35.92 | 37.19 |
| Zm00001d011070_P001 | Maize | cytosol | 37.7 | 37.16 |
| CDX82987 | Canola | nucleus | 36.08 | 37.1 |
| Os03t0690600-03 | Rice | cytosol | 43.53 | 36.8 |
| OQU92829 | Sorghum | cytosol | 43.69 | 36.78 |
| KXG21079 | Sorghum | cytosol | 37.05 | 36.76 |
| Zm00001d028603_P001 | Maize | cytosol | 43.53 | 36.65 |
| Zm00001d035671_P001 | Maize | cytosol | 36.89 | 36.42 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 37.86 | 36.34 |
| CDX79750 | Canola | peroxisome | 39.48 | 36.2 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 35.76 | 36.11 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 39.32 | 36.11 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 38.35 | 36.07 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 38.35 | 36.07 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 38.03 | 35.88 |
| CDY31749 | Canola | cytosol | 41.91 | 35.67 |
| CDX77228 | Canola | cytosol | 38.35 | 35.27 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 33.98 | 35.23 |
| KXG37250 | Sorghum | cytosol | 36.73 | 34.87 |
| CDX68388 | Canola | cytosol | 22.82 | 34.06 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 41.91 | 33.46 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 41.91 | 33.38 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 41.59 | 33.12 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 41.59 | 32.66 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 35.92 | 32.17 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 36.41 | 32.1 |
| Zm00001d047813_P002 | Maize | nucleus | 43.04 | 32.09 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 36.57 | 31.7 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 36.08 | 31.68 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 36.08 | 31.59 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 36.73 | 31.57 |
| OQU91407 | Sorghum | nucleus | 34.95 | 31.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.5 | 31.41 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 36.73 | 31.4 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 36.25 | 31.28 |
| KXG38064 | Sorghum | nucleus | 36.25 | 31.11 |
| EER91260 | Sorghum | nucleus | 36.08 | 30.93 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 35.76 | 30.91 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 36.08 | 30.89 |
| Zm00001d033166_P001 | Maize | nucleus | 36.08 | 30.46 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 35.44 | 30.37 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 35.6 | 30.34 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 35.11 | 30.1 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 35.44 | 30.08 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 32.85 | 30.03 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 34.95 | 29.92 |
| Zm00001d035670_P001 | Maize | cytosol | 35.11 | 29.89 |
| OQU91406 | Sorghum | nucleus | 36.08 | 29.81 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 34.79 | 29.49 |
| EES18882 | Sorghum | cytosol | 34.95 | 29.47 |
| EES18880 | Sorghum | cytosol | 34.63 | 28.88 |
| CDY07309 | Canola | cytosol | 11.0 | 28.33 |
| CDY00883 | Canola | cytosol | 18.28 | 27.9 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 33.17 | 27.08 |
| CDY71156 | Canola | cytosol, plastid | 16.83 | 26.67 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 21.2 | 26.36 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 21.2 | 26.36 |
| CDY71174 | Canola | cytosol, plastid | 21.2 | 26.36 |
| CDY05700 | Canola | cytosol, plastid | 21.04 | 26.16 |
| CDY19966 | Canola | cytosol | 20.71 | 25.91 |
| CDY00074 | Canola | cytosol, plastid | 20.71 | 25.75 |
| CDY22807 | Canola | nucleus | 17.31 | 25.48 |
| CDY37124 | Canola | nucleus | 17.31 | 25.48 |
| CDY50128 | Canola | cytosol, plastid | 21.36 | 24.77 |
| CDY58168 | Canola | plastid | 21.2 | 24.72 |
| CDY42968 | Canola | cytosol | 21.36 | 24.67 |
| CDY35589 | Canola | cytosol | 21.2 | 24.67 |
| CDY27821 | Canola | cytosol | 17.48 | 24.32 |
| CDY00533 | Canola | cytosol | 17.15 | 23.77 |
| CDY61060 | Canola | cytosol | 20.55 | 23.56 |
| CDY00377 | Canola | cytosol | 20.55 | 23.09 |
| CDY50240 | Canola | cytosol | 21.04 | 22.57 |
| CDY68224 | Canola | cytosol | 21.04 | 22.57 |
| CDY27063 | Canola | cytosol, plastid | 19.09 | 20.49 |
| CDX91655 | Canola | cytosol | 18.93 | 19.9 |
Protein Annotations
| EnsemblPlants:CDY47877 | EnsemblPlantsGene:GSBRNA2T00088382001 | GO:A0A078ICN3 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| ncoils:Coil | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF129 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY47877 |
| ProteinID:CDY47877.1 | SEG:seg | UniParc:UPI0004EE6B45 | UniProt:A0A078ICN3 | MapMan:15.5.12 | : |
Description
BnaA07g14220DBnaA07g14220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICN3]
Coordinates
chrLK032743:-:29676..31797
Molecular Weight (calculated)
71370.8 Da
IEP (calculated)
6.533
GRAVY (calculated)
-0.497
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNLSLNLN AFEYLDESLF LDSSPSFDFD RNPSFLADPT EEPDENDSST TLLRYVTQIL MEESAGDKQS MFYDSLALRK TEEMLQQVIT DSKAHSATSG
101: SIGSSSSSWS SSVPVHEIVV RSMFSDAESD LQFRRGLEEA RKFLPNSDQW VFNLEKPAVQ VIKEERVKKS HQREVLDLEE QVRSSKQSAT NVEDVEVTDM
201: FDKVLLLDGQ CDPQTLSSQE TMSNKKKKKK KKKKSQVIDF RTLLTHCAQA ISTGDKTTAL DLLLQIRQDS SPMGDASQRL AHCFANALEA RLRGSPVIQT
301: YYNAITSLKE TASDILKAYR VYLSSSPFVT LMYFFSFRMI LDAAKDAEVL HIVDFGILYG FQWPMFIQYM SGRKDVPRKL RITGIELPQR GLRPAERIEE
401: TGRRLAEYCK RFNVPFEYKA IASQHWETIR LDEFNIRPGE VLAVNAGLRL KTLQDETGGE ETCPRDAVLK LIRKMNPDVF VHAIVNGSFN APFFISRFKE
501: AVYHYYALFD MFDSTLPRDN QERIRFEREF YGREAMNVIA CEEGDRVERP ETYRQWQVRM VRAGFKQKPV RDEIVELFRE KLKKWRYHKD FVVDENSKWL
601: LQGWKGRTLY ASSCWVPA
101: SIGSSSSSWS SSVPVHEIVV RSMFSDAESD LQFRRGLEEA RKFLPNSDQW VFNLEKPAVQ VIKEERVKKS HQREVLDLEE QVRSSKQSAT NVEDVEVTDM
201: FDKVLLLDGQ CDPQTLSSQE TMSNKKKKKK KKKKSQVIDF RTLLTHCAQA ISTGDKTTAL DLLLQIRQDS SPMGDASQRL AHCFANALEA RLRGSPVIQT
301: YYNAITSLKE TASDILKAYR VYLSSSPFVT LMYFFSFRMI LDAAKDAEVL HIVDFGILYG FQWPMFIQYM SGRKDVPRKL RITGIELPQR GLRPAERIEE
401: TGRRLAEYCK RFNVPFEYKA IASQHWETIR LDEFNIRPGE VLAVNAGLRL KTLQDETGGE ETCPRDAVLK LIRKMNPDVF VHAIVNGSFN APFFISRFKE
501: AVYHYYALFD MFDSTLPRDN QERIRFEREF YGREAMNVIA CEEGDRVERP ETYRQWQVRM VRAGFKQKPV RDEIVELFRE KLKKWRYHKD FVVDENSKWL
601: LQGWKGRTLY ASSCWVPA
001: MDPNFSESLN GFEYFDGNPN LLTDPMEDQY PPPSDTLLKY VSEILMEESN GDYKQSMFYD SLALRKTEEM LQQVITDSQN QSFSPADSLI TNSWDASGSI
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
Arabidopsis Description
SCL34Scarecrow-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:P0C884]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.