Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030688.1-P | Field mustard | nucleus | 98.18 | 94.48 |
| CDX86475 | Canola | nucleus | 91.19 | 91.83 |
| AT1G07530.1 | Thale cress | cytosol | 82.24 | 76.46 |
| CDY71578 | Canola | nucleus, plastid | 49.79 | 68.33 |
| CDY47878 | Canola | nucleus | 63.08 | 65.27 |
| CDX77228 | Canola | cytosol | 55.66 | 59.23 |
| CDY31749 | Canola | cytosol | 58.74 | 57.85 |
| KRH24780 | Soybean | cytosol | 49.79 | 53.94 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 52.03 | 49.34 |
| KRH29779 | Soybean | cytosol | 50.63 | 48.79 |
| CDX68389 | Canola | cytosol | 5.73 | 48.24 |
| GSMUA_Achr10P... | Banana | nucleus | 29.51 | 47.74 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 20.0 | 45.11 |
| GSMUA_Achr10P... | Banana | cytosol | 37.62 | 44.91 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 49.65 | 44.54 |
| CDY47877 | Canola | nucleus | 38.32 | 44.34 |
| CDY39530 | Canola | cytosol | 38.32 | 44.26 |
| KRH23089 | Soybean | cytosol | 39.72 | 44.1 |
| KRH10243 | Soybean | nucleus | 40.42 | 43.46 |
| CDY06266 | Canola | cytosol | 37.9 | 42.88 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 26.71 | 41.89 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 34.83 | 41.64 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 22.8 | 41.58 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 36.92 | 41.51 |
| KRH23090 | Soybean | vacuole | 35.8 | 41.22 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 23.78 | 41.16 |
| Zm00001d034664_P001 | Maize | plastid | 31.61 | 40.43 |
| CDY06265 | Canola | cytosol | 38.88 | 40.29 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 34.13 | 39.87 |
| KXG38103 | Sorghum | cytosol | 34.83 | 39.78 |
| CDX79750 | Canola | peroxisome | 37.48 | 39.76 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 37.34 | 39.67 |
| OQU92829 | Sorghum | cytosol | 40.42 | 39.37 |
| Os03t0690600-03 | Rice | cytosol | 40.0 | 39.12 |
| CDX82987 | Canola | nucleus | 32.87 | 39.1 |
| CDY09911 | Canola | nucleus | 31.75 | 38.87 |
| CDY09912 | Canola | cytosol | 38.04 | 38.86 |
| Zm00001d028603_P001 | Maize | cytosol | 39.86 | 38.83 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 34.83 | 38.66 |
| CDY33040 | Canola | nucleus | 32.17 | 38.53 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 35.38 | 38.51 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 35.38 | 38.51 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 35.24 | 38.47 |
| Zm00001d011070_P001 | Maize | cytosol | 33.57 | 38.28 |
| KXG21079 | Sorghum | cytosol | 33.29 | 38.2 |
| KXG21080 | Sorghum | cytosol | 33.15 | 37.86 |
| KXG37250 | Sorghum | cytosol | 34.13 | 37.48 |
| Zm00001d035671_P001 | Maize | cytosol | 32.73 | 37.38 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.37 | 35.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.45 | 35.2 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 37.9 | 34.92 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 37.76 | 34.88 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 37.76 | 34.79 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 38.04 | 34.56 |
| CDX68388 | Canola | cytosol | 20.0 | 34.54 |
| Zm00001d047813_P002 | Maize | nucleus | 39.86 | 34.38 |
| Zm00001d035670_P001 | Maize | cytosol | 33.99 | 33.47 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 32.73 | 33.24 |
| EES18882 | Sorghum | cytosol | 33.57 | 32.74 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 31.19 | 32.32 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 31.89 | 32.29 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 32.45 | 32.27 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 32.45 | 32.13 |
| EER91260 | Sorghum | nucleus | 32.31 | 32.04 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 32.31 | 32.04 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 32.31 | 31.99 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 32.31 | 31.86 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 31.75 | 31.84 |
| OQU91407 | Sorghum | nucleus | 30.49 | 31.78 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 31.05 | 31.67 |
| EES18880 | Sorghum | cytosol | 32.73 | 31.58 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 29.65 | 31.36 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 31.19 | 31.19 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 31.75 | 31.18 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 31.19 | 31.15 |
| KXG38064 | Sorghum | nucleus | 31.33 | 31.11 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 31.61 | 31.0 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 31.19 | 30.93 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 31.19 | 30.84 |
| Zm00001d033166_P001 | Maize | nucleus | 31.47 | 30.74 |
| OQU91406 | Sorghum | nucleus | 31.47 | 30.08 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 30.91 | 29.19 |
| CDY07309 | Canola | cytosol | 9.79 | 29.17 |
| CDY71156 | Canola | cytosol, plastid | 15.38 | 28.21 |
| CDY00883 | Canola | cytosol | 15.66 | 27.65 |
| CDY22807 | Canola | nucleus | 15.94 | 27.14 |
| CDY37124 | Canola | nucleus | 15.8 | 26.9 |
| CDY35589 | Canola | cytosol | 19.58 | 26.37 |
| CDY42968 | Canola | cytosol | 19.72 | 26.36 |
| CDY58168 | Canola | plastid | 19.02 | 25.66 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 17.76 | 25.55 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 17.76 | 25.55 |
| CDY50128 | Canola | cytosol, plastid | 19.02 | 25.52 |
| CDY19966 | Canola | cytosol | 17.48 | 25.3 |
| CDY00074 | Canola | cytosol, plastid | 17.34 | 24.95 |
| CDY71174 | Canola | cytosol, plastid | 17.2 | 24.75 |
| CDY05700 | Canola | cytosol, plastid | 17.06 | 24.55 |
| CDY27821 | Canola | cytosol | 13.99 | 22.52 |
| CDY61060 | Canola | cytosol | 16.78 | 22.26 |
| CDY00377 | Canola | cytosol | 17.06 | 22.18 |
| CDY00533 | Canola | cytosol | 13.71 | 21.97 |
| CDY68224 | Canola | cytosol | 17.62 | 21.88 |
| CDY50240 | Canola | cytosol | 17.48 | 21.7 |
| CDY27063 | Canola | cytosol, plastid | 16.08 | 19.97 |
| CDX91655 | Canola | cytosol | 15.38 | 18.71 |
Protein Annotations
| EnsemblPlants:CDY15616 | EnsemblPlantsGene:GSBRNA2T00089803001 | GO:A0A078FR76 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF132 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY15616 | ProteinID:CDY15616.1 |
| SEG:seg | UniParc:UPI0004EE05CF | UniProt:A0A078FR76 | MapMan:15.5.12 | : | : |
Description
BnaA08g29000DBnaA08g29000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR76]
Coordinates
chrLK032055:-:740748..743210
Molecular Weight (calculated)
80186.6 Da
IEP (calculated)
5.179
GRAVY (calculated)
-0.577
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYSGGSLD GFDFTSEFDN LPASNQTVDS SDGFYLDDPL LNFVSFDHSS APPPETYPQK NVAAASGDRL ASPSDDSEFS DSVLKYISQV LMEEDMEEKP
101: CMFHDALALQ AAEKSLYEAL GEQYPSSVEH GASYPEKLAE DSPDGSFPSG GGFSDYASTT TSSDSHWSLD GLENNNRPSW LQTPFPSNFV FQSTSRSTSV
201: NSGGNTASFG SSMFKDNELA MQFKRGVDEA SKFLPKSSQL FIDVDSYVPK NSRFDENTSE VFVKTEKKDD ADPPPPSSNR LTRKKKSHWR DEDEDLAEER
301: SNKQSAVYVE ETELSEMFDK ILLCGGTGQP VCITDQKFPT EAKTRGKKST ATTTNSNSSK GSKKETADLR TLLVLCAQAV SVDDRRTANE MLRQIREHSS
401: PLGNGSERLA HYFANSLEAR LAGTGTQIYT ALSSKKTIMR LTANADTIHI VDFGISYGFQ WPALIHRLSF RPGGPPKLRI TGIELPQRGF RPAEGVHETG
501: HRLARYCQRY KVPFEYNAIA QKWETIRVED LKIEQGEFVV VNSLFRFKNL LDETVVVNSP RDAVLKLIRK ANPSVFIQAV LSGSYNAPFF VTRFREALFH
601: YSALFDMCDS KLAREDEMRL MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARVIRAG FKQLPLEKEL MQNLKLKIEN GYDKNFDIDQ NGNWLLQGWK
701: GRIVYASSVW VPSSS
101: CMFHDALALQ AAEKSLYEAL GEQYPSSVEH GASYPEKLAE DSPDGSFPSG GGFSDYASTT TSSDSHWSLD GLENNNRPSW LQTPFPSNFV FQSTSRSTSV
201: NSGGNTASFG SSMFKDNELA MQFKRGVDEA SKFLPKSSQL FIDVDSYVPK NSRFDENTSE VFVKTEKKDD ADPPPPSSNR LTRKKKSHWR DEDEDLAEER
301: SNKQSAVYVE ETELSEMFDK ILLCGGTGQP VCITDQKFPT EAKTRGKKST ATTTNSNSSK GSKKETADLR TLLVLCAQAV SVDDRRTANE MLRQIREHSS
401: PLGNGSERLA HYFANSLEAR LAGTGTQIYT ALSSKKTIMR LTANADTIHI VDFGISYGFQ WPALIHRLSF RPGGPPKLRI TGIELPQRGF RPAEGVHETG
501: HRLARYCQRY KVPFEYNAIA QKWETIRVED LKIEQGEFVV VNSLFRFKNL LDETVVVNSP RDAVLKLIRK ANPSVFIQAV LSGSYNAPFF VTRFREALFH
601: YSALFDMCDS KLAREDEMRL MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARVIRAG FKQLPLEKEL MQNLKLKIEN GYDKNFDIDQ NGNWLLQGWK
701: GRIVYASSVW VPSSS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.