Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031580.1-P | Field mustard | cytosol | 99.28 | 99.28 |
| CDY09912 | Canola | cytosol | 96.23 | 94.86 |
| CDY06266 | Canola | cytosol | 76.09 | 83.07 |
| AT1G07520.3 | Thale cress | cytosol | 78.41 | 77.73 |
| CDY09911 | Canola | nucleus | 60.72 | 71.75 |
| CDY47877 | Canola | nucleus | 57.68 | 64.4 |
| CDY39530 | Canola | cytosol | 57.68 | 64.3 |
| CDX68389 | Canola | cytosol | 6.38 | 51.76 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 22.61 | 49.21 |
| KRH29773 | Soybean | cytosol | 40.87 | 45.93 |
| PGSC0003DMT400005480 | Potato | cytosol | 32.03 | 45.38 |
| KRH29774 | Soybean | cytosol | 40.43 | 44.22 |
| CDY71578 | Canola | nucleus, plastid | 32.61 | 43.19 |
| KRH24778 | Soybean | nucleus | 41.88 | 42.75 |
| KRH29775 | Soybean | nucleus | 41.3 | 42.35 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 45.07 | 41.86 |
| KRH24775 | Soybean | cytosol | 40.72 | 41.32 |
| GSMUA_Achr10P... | Banana | nucleus | 26.09 | 40.72 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 26.81 | 40.57 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 40.43 | 40.55 |
| Solyc06g076280.1.1 | Tomato | cytosol | 43.91 | 40.51 |
| CDX86475 | Canola | nucleus | 41.45 | 40.28 |
| PGSC0003DMT400077972 | Potato | cytosol | 43.62 | 40.03 |
| CDY15616 | Canola | nucleus | 40.29 | 38.88 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 35.22 | 38.21 |
| CDY47878 | Canola | nucleus | 38.26 | 38.21 |
| GSMUA_Achr10P... | Banana | cytosol | 33.04 | 38.06 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 22.61 | 37.77 |
| CDX82987 | Canola | nucleus | 32.61 | 37.44 |
| KXG21080 | Sorghum | cytosol | 33.77 | 37.22 |
| CDY33040 | Canola | nucleus | 32.17 | 37.19 |
| Zm00001d034664_P001 | Maize | plastid | 30.0 | 37.03 |
| Zm00001d011070_P001 | Maize | cytosol | 32.9 | 36.2 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 33.77 | 36.18 |
| KXG38103 | Sorghum | cytosol | 32.61 | 35.94 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 33.91 | 35.73 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 30.87 | 35.62 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 33.91 | 35.62 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 33.77 | 35.46 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 31.3 | 35.29 |
| CDY31749 | Canola | cytosol | 36.96 | 35.12 |
| Os03t0690600-03 | Rice | cytosol | 37.1 | 35.02 |
| Zm00001d028603_P001 | Maize | cytosol | 37.25 | 35.01 |
| KXG21079 | Sorghum | cytosol | 31.59 | 34.99 |
| CDX79750 | Canola | peroxisome | 34.06 | 34.87 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 33.91 | 34.77 |
| OQU92829 | Sorghum | cytosol | 36.96 | 34.74 |
| CDX77228 | Canola | cytosol | 33.62 | 34.52 |
| Zm00001d035671_P001 | Maize | cytosol | 31.3 | 34.5 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 29.57 | 34.23 |
| KXG37250 | Sorghum | cytosol | 32.03 | 33.95 |
| CDX68388 | Canola | cytosol | 20.14 | 33.57 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 18.7 | 32.91 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 35.65 | 31.7 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 35.65 | 31.7 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 35.51 | 31.65 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 31.59 | 31.59 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 35.8 | 31.39 |
| Zm00001d047813_P002 | Maize | nucleus | 36.81 | 30.64 |
| OQU91407 | Sorghum | nucleus | 30.14 | 30.32 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 31.3 | 30.21 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 31.3 | 30.17 |
| EER91260 | Sorghum | nucleus | 31.45 | 30.1 |
| KXG38064 | Sorghum | nucleus | 31.3 | 30.0 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 30.29 | 29.81 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 31.16 | 29.78 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 30.72 | 29.73 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 30.29 | 29.6 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 30.87 | 29.54 |
| Zm00001d035670_P001 | Maize | cytosol | 31.01 | 29.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.12 | 29.44 |
| OQU91406 | Sorghum | nucleus | 31.88 | 29.41 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 30.0 | 29.4 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 30.58 | 29.35 |
| Zm00001d033166_P001 | Maize | nucleus | 31.01 | 29.23 |
| EES18882 | Sorghum | cytosol | 31.01 | 29.2 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 30.43 | 29.05 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 28.26 | 28.85 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 30.14 | 28.81 |
| CDY07309 | Canola | cytosol | 10.0 | 28.75 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 30.14 | 28.57 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 30.0 | 28.55 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 29.71 | 28.43 |
| EES18880 | Sorghum | cytosol | 30.14 | 28.07 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 29.57 | 27.98 |
| CDY00883 | Canola | cytosol | 15.65 | 26.67 |
| CDY37124 | Canola | nucleus | 16.23 | 26.67 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 29.13 | 26.55 |
| CDY71156 | Canola | cytosol, plastid | 14.93 | 26.41 |
| CDY22807 | Canola | nucleus | 15.94 | 26.19 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 17.97 | 24.95 |
| CDY19966 | Canola | cytosol | 17.83 | 24.9 |
| CDY00074 | Canola | cytosol, plastid | 17.83 | 24.75 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 17.83 | 24.75 |
| CDY71174 | Canola | cytosol, plastid | 17.83 | 24.75 |
| CDY05700 | Canola | cytosol, plastid | 17.68 | 24.55 |
| CDY42968 | Canola | cytosol | 18.26 | 23.55 |
| CDY58168 | Canola | plastid | 17.83 | 23.21 |
| CDY35589 | Canola | cytosol | 17.83 | 23.16 |
| CDY50128 | Canola | cytosol, plastid | 17.83 | 23.08 |
| CDY27821 | Canola | cytosol | 14.78 | 22.97 |
| CDY61060 | Canola | cytosol | 17.68 | 22.63 |
| CDY00533 | Canola | cytosol | 14.49 | 22.42 |
| CDY00377 | Canola | cytosol | 17.39 | 21.82 |
| CDY50240 | Canola | cytosol | 17.97 | 21.53 |
| CDY68224 | Canola | cytosol | 17.97 | 21.53 |
| CDY27063 | Canola | cytosol, plastid | 15.8 | 18.92 |
| CDX91655 | Canola | cytosol | 15.8 | 18.54 |
Protein Annotations
| EnsemblPlants:CDY06265 | EnsemblPlantsGene:GSBRNA2T00122183001 | GO:A0A078EW38 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF129 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY06265 | ProteinID:CDY06265.1 | SEG:seg |
| UniParc:UPI0004EEE672 | MapMan:15.5.12 | : | : | : | : |
Description
BnaA09g49380D
Coordinates
chrLK031968:-:535810..537882
Molecular Weight (calculated)
78854.8 Da
IEP (calculated)
5.883
GRAVY (calculated)
-0.583
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MMESNFYRIV NGHEYYDVSF LPNQIPDLGF GVPSSSDFDL RLDHHHHHQQ PSYWIPSTQQ DQDSPPGADE IDSENTLLKY VNQLLMEETL SENQSMSYDD
101: ALALRQTEEM LQQVINDSLA QSSNSITSST SSGSSSGGEY LNSNSNSCVR IETEANSTES EALSDDHPHH ILGSNMLSGY GQPANEILVR SMFSDADSVN
201: QFKRGLEEAS KFLPNTDQWI FNPQHEVISV KDEKGFSRVR KHHHQEPEEE EARRSKQSAV NVDDGNISEL FDKVLLLDNQ LDPQIKEETN NVSSKKEGGR
301: GKKKSKAVDF RTLLTLCAQS ISSGDKLAAD DLLNQIKKQC SPLGDASQRL AYFFTKALEA RLQGSSGVMI QSYYDSITSK KRTAAQILKT YKAFLSASPF
401: MTLIYFFSNK MILDASKDAS VLHIIDFGIL YGFQWPMFIQ YISKSKIGPR KLRITGVELP QNGFRPTEKI EDTGRRLREY CKRFGVPFEY NAIASKNWET
501: IRLEEFKIRP NEVLAVNSVL RLKNLRDVTP GEEDCPRDGF LKLIRDMKPD VFLSSTINGS FNAPFFATRF KEALFHYSSL FDMFGSTLSK ENPERMHFEG
601: EFFGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVETELVESF REKMKRWGYH KDFVLDEDSN WFLQGWKGRI LFSSSCWVPS
101: ALALRQTEEM LQQVINDSLA QSSNSITSST SSGSSSGGEY LNSNSNSCVR IETEANSTES EALSDDHPHH ILGSNMLSGY GQPANEILVR SMFSDADSVN
201: QFKRGLEEAS KFLPNTDQWI FNPQHEVISV KDEKGFSRVR KHHHQEPEEE EARRSKQSAV NVDDGNISEL FDKVLLLDNQ LDPQIKEETN NVSSKKEGGR
301: GKKKSKAVDF RTLLTLCAQS ISSGDKLAAD DLLNQIKKQC SPLGDASQRL AYFFTKALEA RLQGSSGVMI QSYYDSITSK KRTAAQILKT YKAFLSASPF
401: MTLIYFFSNK MILDASKDAS VLHIIDFGIL YGFQWPMFIQ YISKSKIGPR KLRITGVELP QNGFRPTEKI EDTGRRLREY CKRFGVPFEY NAIASKNWET
501: IRLEEFKIRP NEVLAVNSVL RLKNLRDVTP GEEDCPRDGF LKLIRDMKPD VFLSSTINGS FNAPFFATRF KEALFHYSSL FDMFGSTLSK ENPERMHFEG
601: EFFGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVETELVESF REKMKRWGYH KDFVLDEDSN WFLQGWKGRI LFSSSCWVPS
001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.