Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- golgi 3
- plasma membrane 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 97.79 | 97.79 |
| CDX68389 | Canola | cytosol | 19.24 | 71.76 |
| CDY33040 | Canola | nucleus | 97.48 | 51.76 |
| AT5G59450.1 | Thale cress | nucleus | 87.07 | 45.25 |
| CDX82987 | Canola | nucleus | 72.24 | 38.1 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 48.27 | 34.62 |
| CDX68388 | Canola | cytosol | 40.69 | 31.16 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 42.9 | 29.82 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 38.8 | 29.78 |
| Zm00001d034664_P001 | Maize | plastid | 52.37 | 29.7 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 57.41 | 28.17 |
| CDY71578 | Canola | nucleus, plastid | 44.48 | 27.06 |
| Solyc01g100200.2.1 | Tomato | nucleus | 56.47 | 26.88 |
| KRH10240 | Soybean | cytosol | 51.1 | 26.73 |
| KRH23095 | Soybean | cytosol | 53.0 | 25.57 |
| CDY39530 | Canola | cytosol | 49.21 | 25.2 |
| KXG37250 | Sorghum | cytosol | 51.73 | 25.19 |
| Solyc06g082530.1.1 | Tomato | cytosol | 51.73 | 25.11 |
| CDY47877 | Canola | nucleus | 48.9 | 25.08 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 50.16 | 25.0 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 51.73 | 24.92 |
| PGSC0003DMT400078286 | Potato | nucleus | 52.37 | 24.89 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 54.89 | 24.72 |
| KRH29771 | Soybean | cytosol | 52.68 | 24.56 |
| CDY71156 | Canola | cytosol, plastid | 29.97 | 24.36 |
| KRH24773 | Soybean | nucleus | 52.68 | 24.31 |
| KXG38103 | Sorghum | cytosol | 47.95 | 24.28 |
| KXG21079 | Sorghum | cytosol | 47.63 | 24.24 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 49.21 | 24.22 |
| CDX79750 | Canola | peroxisome | 51.1 | 24.04 |
| Zm00001d035671_P001 | Maize | cytosol | 47.32 | 23.96 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 50.79 | 23.92 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 48.58 | 23.51 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 48.58 | 23.44 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 48.58 | 23.44 |
| CDY06266 | Canola | cytosol | 46.37 | 23.26 |
| KRH23094 | Soybean | cytosol | 40.38 | 23.15 |
| CDY22807 | Canola | nucleus | 30.6 | 23.1 |
| CDY37124 | Canola | nucleus | 30.6 | 23.1 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 43.22 | 22.99 |
| Zm00001d011070_P001 | Maize | cytosol | 45.11 | 22.81 |
| CDY00883 | Canola | cytosol | 29.02 | 22.72 |
| KXG21080 | Sorghum | cytosol | 44.8 | 22.68 |
| CDY06265 | Canola | cytosol | 49.21 | 22.61 |
| CDY07309 | Canola | cytosol | 17.03 | 22.5 |
| CDX86475 | Canola | nucleus | 49.53 | 22.11 |
| CDY09912 | Canola | cytosol | 48.58 | 22.0 |
| OQU92829 | Sorghum | cytosol | 50.79 | 21.93 |
| CDY47878 | Canola | nucleus | 47.63 | 21.85 |
| Os03t0690600-03 | Rice | cytosol | 50.16 | 21.75 |
| GSMUA_Achr10P... | Banana | cytosol | 41.01 | 21.7 |
| Zm00001d028603_P001 | Maize | cytosol | 49.53 | 21.39 |
| GSMUA_Achr10P... | Banana | nucleus | 29.34 | 21.04 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 40.06 | 20.75 |
| CDX77228 | Canola | cytosol | 43.85 | 20.68 |
| OQU91407 | Sorghum | nucleus | 44.16 | 20.41 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 44.16 | 20.29 |
| CDY31749 | Canola | cytosol | 46.37 | 20.25 |
| CDY15616 | Canola | nucleus | 45.11 | 20.0 |
| CDY05700 | Canola | cytosol, plastid | 31.23 | 19.92 |
| CDY71174 | Canola | cytosol, plastid | 31.23 | 19.92 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 30.91 | 19.72 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 30.91 | 19.72 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 47.95 | 19.64 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 47.95 | 19.59 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 36.91 | 19.57 |
| CDY00074 | Canola | cytosol, plastid | 30.6 | 19.52 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 47.63 | 19.46 |
| CDY19966 | Canola | cytosol | 30.28 | 19.43 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 47.95 | 19.31 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 43.53 | 19.3 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 43.85 | 19.28 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 43.53 | 19.27 |
| Zm00001d047813_P002 | Maize | nucleus | 50.16 | 19.18 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 42.27 | 19.03 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 43.22 | 18.98 |
| CDY27821 | Canola | cytosol | 26.5 | 18.92 |
| EES18882 | Sorghum | cytosol | 43.53 | 18.83 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 43.22 | 18.82 |
| CDY58168 | Canola | plastid | 31.23 | 18.68 |
| CDY00533 | Canola | cytosol | 26.18 | 18.61 |
| Zm00001d035670_P001 | Maize | cytosol | 42.59 | 18.59 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 42.27 | 18.56 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 41.32 | 18.56 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 41.01 | 18.54 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 42.59 | 18.52 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 41.64 | 18.51 |
| Zm00001d033166_P001 | Maize | nucleus | 42.27 | 18.31 |
| CDY35589 | Canola | cytosol | 30.6 | 18.27 |
| CDY42968 | Canola | cytosol | 30.6 | 18.13 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 41.32 | 18.12 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 41.01 | 18.08 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 38.49 | 18.05 |
| KXG38064 | Sorghum | nucleus | 40.69 | 17.92 |
| OQU91406 | Sorghum | nucleus | 42.27 | 17.91 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 22.08 | 17.86 |
| CDY50128 | Canola | cytosol, plastid | 29.97 | 17.82 |
| EES18880 | Sorghum | cytosol | 41.64 | 17.81 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 40.69 | 17.79 |
| EER91260 | Sorghum | nucleus | 40.06 | 17.61 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 39.75 | 17.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.33 | 17.0 |
| CDY09911 | Canola | nucleus | 30.91 | 16.78 |
| CDY61060 | Canola | cytosol | 27.76 | 16.33 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 38.17 | 15.98 |
| CDY00377 | Canola | cytosol | 27.44 | 15.82 |
| CDY27063 | Canola | cytosol, plastid | 27.76 | 15.28 |
| CDY68224 | Canola | cytosol | 27.44 | 15.1 |
| CDY50240 | Canola | cytosol | 27.13 | 14.93 |
| CDX91655 | Canola | cytosol | 26.18 | 14.12 |
Protein Annotations
| EnsemblPlants:CDX80265 | EnsemblPlantsGene:GSBRNA2T00133246001 | GO:A0A078CTS3 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF56 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDX80265 | ProteinID:CDX80265.1 | UniParc:UPI0004EE01E7 |
| MapMan:15.5.12 | : | : | : | : | : |
Description
BnaC09g34770D
Coordinates
chrLK031820:-:968470..969423
Molecular Weight (calculated)
36893.7 Da
IEP (calculated)
8.664
GRAVY (calculated)
-0.171
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDILKAYKL FVHVCPIYVA DYFAANKSIY ELALNSTKLH VIDFGVLYGF QWPCLLLALS KRPGGPPKLR VTGIELPQSG FRPSDRVEET GRRLKRFCDM
101: FNVPFEFNFI AKKWESITLD EITIIPGETT VVNCIHRLQY TPDETVSLDS PRDTVLKLFR DISPDLFVFA EINGTYNSPF FMTRFKEALF HFSSLFDMFD
201: TTIQAEDEYK NRALLERELL VRDAMSVISS EGAERFARPE TYKQWRVRLL RAGFRPAMVS REILKGAKEI VRKRYHKDFL IDGDGNWMLQ GWKGRVIYAF
301: SCWKPAEKLT RDDHIII
101: FNVPFEFNFI AKKWESITLD EITIIPGETT VVNCIHRLQY TPDETVSLDS PRDTVLKLFR DISPDLFVFA EINGTYNSPF FMTRFKEALF HFSSLFDMFD
201: TTIQAEDEYK NRALLERELL VRDAMSVISS EGAERFARPE TYKQWRVRLL RAGFRPAMVS REILKGAKEI VRKRYHKDFL IDGDGNWMLQ GWKGRVIYAF
301: SCWKPAEKLT RDDHIII
001: MDALLQVSVD GFRFENGSGS CCKPRNNLES GNNLFPDFHE SQNQSSPNDS PPTVCLDNSP VLKYINDMLM DEEDFVGISR DDLALQAAER SFYEIIQQQS
101: PESDQNTSSS SDQNSGDQDF CFPSTTTDSS ALVSSGESQR KYRHRNDEED DLENNRRNKQ PAIFVSEMEE LAVKLEHVLL VCKTNQEEEE ERTVITKQST
201: PNRAGRAKGS SNKSKTHKTN TVDLRSLLTQ CAQAVASFDQ RRATDKLKEI RAHSSSNGDG TQRLAFYFAE ALEARITGNI SPPVSNPFPS STTSMVDILK
301: AYKLFVHTCP IYVTDYFAAN KSIYELAMKA TKLHIVDFGV LYGFQWPCLL RALSKRPGGP PMLRVTGIEL PQAGFRPSDR VEETGRRLKR FCDQFNVPFE
401: FNFIAKKWET ITLDELMINP GETTVVNCIH RLQYTPDETV SLDSPRDTVL KLFRDINPDL FVFAEINGMY NSPFFMTRFR EALFHYSSLF DMFDTTIHAE
501: DEYKNRSLLE RELLVRDAMS VISCEGAERF ARPETYKQWR VRILRAGFKP ATISKQIMKE AKEIVRKRYH RDFVIDSDNN WMLQGWKGRV IYAFSCWKPA
601: EKFTNNNLNI
101: PESDQNTSSS SDQNSGDQDF CFPSTTTDSS ALVSSGESQR KYRHRNDEED DLENNRRNKQ PAIFVSEMEE LAVKLEHVLL VCKTNQEEEE ERTVITKQST
201: PNRAGRAKGS SNKSKTHKTN TVDLRSLLTQ CAQAVASFDQ RRATDKLKEI RAHSSSNGDG TQRLAFYFAE ALEARITGNI SPPVSNPFPS STTSMVDILK
301: AYKLFVHTCP IYVTDYFAAN KSIYELAMKA TKLHIVDFGV LYGFQWPCLL RALSKRPGGP PMLRVTGIEL PQAGFRPSDR VEETGRRLKR FCDQFNVPFE
401: FNFIAKKWET ITLDELMINP GETTVVNCIH RLQYTPDETV SLDSPRDTVL KLFRDINPDL FVFAEINGMY NSPFFMTRFR EALFHYSSLF DMFDTTIHAE
501: DEYKNRSLLE RELLVRDAMS VISCEGAERF ARPETYKQWR VRILRAGFKP ATISKQIMKE AKEIVRKRYH RDFVIDSDNN WMLQGWKGRV IYAFSCWKPA
601: EKFTNNNLNI
Arabidopsis Description
SCL11Scarecrow-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.