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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 99.41 99.41
CDX79750 Canola peroxisome 98.51 98.37
AT2G37650.1 Thale cress cytosol 85.44 80.08
CDX68389 Canola cytosol 7.13 56.47
PGSC0003DMT400049420 Potato cytosol 50.82 51.51
CDX80265 Canola endoplasmic reticulum, golgi 23.92 50.79
GSMUA_Achr10P... Banana nucleus 32.1 48.87
VIT_08s0007g00510.t01 Wine grape cytosol, plastid 51.41 48.8
KRH49113 Soybean cytosol 52.6 48.23
KRH65839 Soybean cytosol, plastid 52.15 48.08
KRG99969 Soybean cytosol 52.6 48.03
Solyc10g086530.1.1 Tomato cytosol 51.86 45.86
GSMUA_Achr8P02550_001 Banana nucleus 26.6 45.66
PGSC0003DMT400022997 Potato cytosol, plastid 51.56 45.6
GSMUA_Achr10P... Banana cytosol 40.56 45.58
Solyc09g010920.1.1 Tomato cytosol 51.26 45.34
TraesCS1B01G037500.1 Wheat cytosol 26.89 43.83
HORVU3Hr1G012520.1 Barley cytosol 29.57 43.64
GSMUA_Achr6P34090_001 Banana nucleus 39.52 43.46
Zm00001d034664_P001 Maize plastid 35.81 43.11
GSMUA_Achr7P15080_001 Banana cytosol 37.89 42.64
Os03t0690600-03 Rice cytosol 45.77 42.13
Zm00001d028603_P001 Maize cytosol 45.17 41.42
OQU92829 Sorghum cytosol 45.02 41.28
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 38.63 40.88
CDY71578 Canola nucleus, plastid 31.5 40.69
KXG38103 Sorghum cytosol 37.3 40.1
KXG21079 Sorghum cytosol 36.85 39.81
TraesCS5A01G481300.1 Wheat cytosol 38.63 39.69
KXG37250 Sorghum cytosol 38.34 39.63
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 37.89 39.6
CDX86475 Canola nucleus 41.75 39.58
TraesCS5B01G494500.1 Wheat cytosol 38.48 39.42
TraesCS5D01G494900.1 Wheat cytosol 38.48 39.42
CDY47877 Canola nucleus 36.11 39.32
CDY39530 Canola cytosol 36.11 39.26
KXG21080 Sorghum cytosol 36.4 39.14
Zm00001d035671_P001 Maize cytosol 36.26 38.98
CDY33040 Canola nucleus 34.32 38.69
Zm00001d011070_P001 Maize cytosol 35.96 38.6
CDY47878 Canola nucleus 39.23 38.21
CDX82987 Canola nucleus 34.03 38.1
CDX77228 Canola cytosol 37.89 37.95
TraesCS5D01G152700.1 Wheat cytosol, plastid 43.39 37.73
TraesCS5A01G139000.1 Wheat cytosol, plastid 43.39 37.63
TraesCS5B01G138100.1 Wheat cytosol, plastid 43.24 37.5
CDY31749 Canola cytosol 40.42 37.47
HORVU5Hr1G045020.29 Barley cytosol 43.69 37.36
CDY15616 Canola nucleus 39.67 37.34
GSMUA_AchrUn_... Banana cytosol 36.55 37.33
HORVU3Hr1G012550.6 Barley cytosol 32.99 37.25
Zm00001d047813_P002 Maize nucleus 45.62 37.03
CDY06266 Canola cytosol 33.14 35.28
Zm00001d035670_P001 Maize cytosol 37.59 34.85
EES18882 Sorghum cytosol 37.74 34.65
TraesCS1B01G037300.1 Wheat cytosol 35.96 34.38
TraesCS1D01G030900.1 Wheat cytosol 36.26 34.22
CDY06265 Canola cytosol 34.77 33.91
TraesCS3D01G067900.1 Wheat nucleus 34.62 33.77
EES18880 Sorghum cytosol 37.15 33.74
OQU91407 Sorghum nucleus 34.32 33.67
HORVU1Hr1G004440.1 Barley cytosol 35.96 33.66
EER91260 Sorghum nucleus 35.96 33.56
TraesCS1D01G031000.1 Wheat cytosol 36.11 33.52
TraesCS1D01G030800.1 Wheat cytosol 34.77 33.38
CDX68388 Canola cytosol 20.51 33.33
CDY09912 Canola cytosol 34.62 33.29
TraesCS1B01G037400.1 Wheat cytosol 35.36 32.92
TraesCS3B01G081100.1 Wheat nucleus 34.77 32.73
TraesCS3D01G067700.1 Wheat cytosol 35.07 32.69
TraesCS3D01G067800.1 Wheat nucleus 32.69 32.54
TraesCS3A01G068000.1 Wheat nucleus 34.62 32.54
CDY07309 Canola cytosol 11.59 32.5
TraesCS1A01G030300.1 Wheat cytosol 34.03 32.44
KXG38064 Sorghum nucleus 34.62 32.36
TraesCS3B01G080900.1 Wheat nucleus 34.62 32.32
Zm00001d033166_P001 Maize nucleus 35.07 32.24
TraesCS1D01G031200.1 Wheat cytosol 34.62 31.96
TraesCS1A01G030200.1 Wheat cytosol 33.88 31.62
TraesCS3A01G067900.1 Wheat cytosol 33.88 31.58
TraesCS3B01G081000.1 Wheat cytosol 34.03 31.46
OQU91406 Sorghum nucleus 34.77 31.28
TraesCS1B01G037200.1 Wheat nucleus 33.43 29.72
CDY00883 Canola cytosol 17.68 29.38
CDY09911 Canola nucleus 25.26 29.11
CDY71156 Canola cytosol, plastid 15.75 27.18
CDX86324 Canola cytosol, nucleus, plastid 19.91 26.96
CDY54511 Canola cytosol, nucleus, plastid 19.91 26.96
CDY42968 Canola cytosol 20.95 26.36
CDY35589 Canola cytosol 20.65 26.18
CDY22807 Canola nucleus 16.2 25.95
CDY37124 Canola nucleus 16.2 25.95
CDY19966 Canola cytosol 19.02 25.91
CDY58168 Canola plastid 20.36 25.85
CDY00074 Canola cytosol, plastid 19.02 25.75
CDY05700 Canola cytosol, plastid 18.72 25.35
CDY71174 Canola cytosol, plastid 18.72 25.35
CDY50128 Canola cytosol, plastid 20.06 25.33
CDY27821 Canola cytosol 15.45 23.42
CDY61060 Canola cytosol 18.43 23.01
CDY00533 Canola cytosol 15.01 22.65
CDY68224 Canola cytosol 19.17 22.4
CDY00377 Canola cytosol 18.28 22.36
CDY50240 Canola cytosol 19.02 22.22
CDY27063 Canola cytosol, plastid 16.64 19.44
CDX91655 Canola cytosol 16.2 18.54
Protein Annotations
MapMan:15.5.12GO:A0A078F3W3UniProt:A0A078F3W3EnsemblPlants:CDY07777ProteinID:CDY07777ProteinID:CDY07777.1
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00124909001InterPro:IPR005202PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636
PANTHER:PTHR31636:SF44InterPro:TF_GRASUniParc:UPI0004EE4D71SEG:seg::
Description
BnaA03g17340DBnaA03g17340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3W3]
Coordinates
chrLK031980:-:910858..913300
Molecular Weight (calculated)
75653.9 Da
IEP (calculated)
6.911
GRAVY (calculated)
-0.436
Length
673 amino acids
Sequence
(BLAST)
001: MITDPAPVDR TRLPDQPSSL TLFDGYNYSH GLSNNQNAFV TSAAGEEEDP ADEFDFSDAV LGYISQILME EDMDDRVCML QESLDLEAAE RSLYEAIGKK
101: YPPSPERSSP YVENLDHVVP AGDRNGSGGG FMSGGMKPMS GGGFTLDFRN PQSRCSPVLS VPQSPYGVHE SSNASREDQS VWLFRRGVEE GSERNEMIVN
201: FREDSRSKVR RNPNSGEEER CSKLPAVFSE TILRSDVVDK ILVHVPGGES MKEFDALREV LKKGVGKKKA SAPQEGKRRA RGRGRGRGGG GVKKEVVDLR
301: SLLIHCAQAV AADDSRCAGQ LLKQIRQHST PFGDGNQRLA HCFANGLEAR LAGTGSQIYK GIVSKPRSAA AVLKAHQLFL ACCPFRKLSY FITNKTIRDL
401: VGNSPRVHVI DFGILYGFQW PTLIHRFSIY GKPKVRVTGI EFPQPGFRPT QRVEETGERL AAYAEQFGVP FEYKAIAKKW DAVQLEDLDI DRDEITVVNC
501: LYRAENLHDE SVKVESCRDA VLSLIGKINP HLFVFGIVNG AYNAPFFVTR FREALFHFSS IFDMLETIVP REDEERMFLE MEVFGREALN VIACEGWERV
601: ERPETYKQWH VRAMRSGLVQ VPFDPDIMKT SLRKVNTFYH KDFVIDQDNR WLLQGWKGRT VMALSVWKPE SKA
Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.