Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026237.1-P | Field mustard | plastid | 98.69 | 98.69 |
| CDY35589 | Canola | cytosol | 96.82 | 97.55 |
| CDY50128 | Canola | cytosol, plastid | 88.6 | 88.93 |
| CDY58168 | Canola | plastid | 88.04 | 88.87 |
| AT4G17230.1 | Thale cress | cytosol | 87.48 | 88.47 |
| KRH51175 | Soybean | cytosol | 58.88 | 58.12 |
| VIT_00s0463g00020.t01 | Wine grape | nucleus | 59.07 | 57.98 |
| KRH01979 | Soybean | cytosol | 58.69 | 57.61 |
| KRH36572 | Soybean | cytosol | 58.88 | 57.48 |
| KRH11548 | Soybean | nucleus | 58.69 | 56.88 |
| PGSC0003DMT400034763 | Potato | cytosol | 55.14 | 55.24 |
| Solyc11g012510.1.1 | Tomato | mitochondrion | 55.89 | 55.17 |
| PGSC0003DMT400021748 | Potato | nucleus | 56.45 | 54.02 |
| PGSC0003DMT400060553 | Potato | cytosol | 52.9 | 54.01 |
| CDY07309 | Canola | cytosol | 23.55 | 52.5 |
| Solyc04g014830.1.1 | Tomato | mitochondrion | 53.64 | 51.9 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 31.59 | 51.52 |
| CDY71156 | Canola | cytosol, plastid | 37.01 | 50.77 |
| CDY37124 | Canola | nucleus | 39.81 | 50.71 |
| CDY22807 | Canola | nucleus | 39.81 | 50.71 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 40.37 | 50.7 |
| CDY00883 | Canola | cytosol | 38.32 | 50.62 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 47.29 | 50.5 |
| Os03t0193000-01 | Rice | plastid | 47.48 | 47.48 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 43.93 | 47.28 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 34.95 | 47.1 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 48.41 | 47.09 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 43.55 | 46.88 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 42.8 | 46.83 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 46.73 | 46.64 |
| CDY71174 | Canola | cytosol, plastid | 43.18 | 46.48 |
| EER95348 | Sorghum | cytosol | 46.54 | 46.46 |
| CDY19966 | Canola | cytosol | 42.8 | 46.36 |
| CDY00074 | Canola | cytosol, plastid | 42.99 | 46.28 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 46.36 | 46.27 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 47.85 | 46.21 |
| Os07t0583600-01 | Rice | plasma membrane | 46.92 | 46.14 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 45.98 | 45.9 |
| CDY05700 | Canola | cytosol, plastid | 42.62 | 45.88 |
| Zm00001d006701_P001 | Maize | cytosol | 47.48 | 45.85 |
| Zm00001d030500_P001 | Maize | nucleus | 46.36 | 45.76 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 47.48 | 45.6 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 47.29 | 45.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.45 | 45.56 |
| EER97449 | Sorghum | cytosol | 46.54 | 45.52 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 45.61 | 45.44 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 46.92 | 45.31 |
| Zm00001d021946_P001 | Maize | cytosol | 46.54 | 44.62 |
| Solyc05g054170.2.1 | Tomato | mitochondrion, nucleus | 25.98 | 41.74 |
| HORVU5Hr1G099160.1 | Barley | plastid | 47.66 | 40.48 |
| CDY61060 | Canola | cytosol | 38.32 | 38.03 |
| CDY00377 | Canola | cytosol | 38.5 | 37.45 |
| CDY68224 | Canola | cytosol | 38.32 | 35.59 |
| CDY50240 | Canola | cytosol | 38.32 | 35.59 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 18.13 | 30.6 |
| CDY27821 | Canola | cytosol | 24.67 | 29.73 |
| CDY00533 | Canola | cytosol | 24.3 | 29.15 |
| CDX68389 | Canola | cytosol | 4.49 | 28.24 |
| CDY71578 | Canola | nucleus, plastid | 23.55 | 24.18 |
| CDY27063 | Canola | cytosol, plastid | 25.98 | 24.13 |
| CDX91655 | Canola | cytosol | 25.61 | 23.3 |
| CDY33040 | Canola | nucleus | 24.11 | 21.61 |
| CDY39530 | Canola | cytosol | 24.86 | 21.49 |
| CDY47877 | Canola | nucleus | 24.67 | 21.36 |
| CDY47878 | Canola | nucleus | 27.1 | 20.98 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 26.36 | 20.95 |
| CDX79750 | Canola | peroxisome | 26.36 | 20.92 |
| CDY06266 | Canola | cytosol | 24.11 | 20.41 |
| CDX68388 | Canola | cytosol | 15.51 | 20.05 |
| CDX86475 | Canola | nucleus | 26.54 | 20.0 |
| CDY15616 | Canola | nucleus | 26.36 | 19.72 |
| CDX82987 | Canola | nucleus | 22.06 | 19.63 |
| CDX77228 | Canola | cytosol | 23.18 | 18.45 |
| CDY31749 | Canola | cytosol | 24.86 | 18.32 |
| CDY06265 | Canola | cytosol | 23.55 | 18.26 |
| CDY09912 | Canola | cytosol | 23.55 | 18.0 |
| CDY09911 | Canola | nucleus | 17.94 | 16.44 |
Protein Annotations
| EnsemblPlants:CDY42968 | EnsemblPlantsGene:GSBRNA2T00075747001 | GO:A0A078I1L4 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:Scarecrow-like_13 |
| InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF45 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY42968 |
| ProteinID:CDY42968.1 | UniParc:UPI0004EDE93A | UniProt:A0A078I1L4 | MapMan:15.5.12 | : | : |
Description
BnaA01g17860DBnaA01g17860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1L4]
Coordinates
chrLK032540:-:219394..222059
Molecular Weight (calculated)
59199.5 Da
IEP (calculated)
6.367
GRAVY (calculated)
-0.252
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTSQKHHSA AGLHMLYPQV HCSPQFQVID KKNKKNAFSD TTPSKESFFT LESSTASGPL PSYESPSVSI TSGRSPFSPQ ASCISDLHPS PENIYESPLS
101: GASSHVYDEA HVKNKIRELE VSLLSVDPKV EEYSGFSPAA GKSWNWDELL ALTPQLDLKE VLVEAAQAVS EGDFAAACGF IDVLEQMVSV SGTPIQRLGT
201: YMAEGLRARL QGTGGNIYRA LKCNEPTGRE LMSYMGVLYE ICPYWKFAYT AANAAILEAV AGEKRVHIID FQIAQGTQYM FLINELAKLP GGPPLLRVTG
301: VDDSQSRFAR GGGLNLVGEK LANKAQSCGV PFEFHDAIMS GCKVHREHLG VEPGFAVVVN FPYVLHHMPD ESVSVENHRD RLLHLIKSLG PKLVTLVEQE
401: SNTNTSPFLS RFVETLDYYT AMFESIDAAR PRDDKQRISA EQHCVARDIV NMIACEEAER VERHEVLGKW RVRMMMAGFM GWPVSSSAAF AASEMLKGYD
501: KNYKLGESEG ALYLFWKRRP MATCSAWKPN PNQIV
101: GASSHVYDEA HVKNKIRELE VSLLSVDPKV EEYSGFSPAA GKSWNWDELL ALTPQLDLKE VLVEAAQAVS EGDFAAACGF IDVLEQMVSV SGTPIQRLGT
201: YMAEGLRARL QGTGGNIYRA LKCNEPTGRE LMSYMGVLYE ICPYWKFAYT AANAAILEAV AGEKRVHIID FQIAQGTQYM FLINELAKLP GGPPLLRVTG
301: VDDSQSRFAR GGGLNLVGEK LANKAQSCGV PFEFHDAIMS GCKVHREHLG VEPGFAVVVN FPYVLHHMPD ESVSVENHRD RLLHLIKSLG PKLVTLVEQE
401: SNTNTSPFLS RFVETLDYYT AMFESIDAAR PRDDKQRISA EQHCVARDIV NMIACEEAER VERHEVLGKW RVRMMMAGFM GWPVSSSAAF AASEMLKGYD
501: KNYKLGESEG ALYLFWKRRP MATCSAWKPN PNQIV
001: MQTSQKHHSA AGLHMLYPQV YCSPQFQAKD NKGFSDIPSK ENFFTLESST ASGSLPSYDS PSVSITSGRS PFSPQGSQSC ISDLHHSPDN VYGSPLSGVS
101: SLAYDEAGVK SKIRELEVSL LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV LEQMVSVSGS PIQRLGTYMA
201: EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301: SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT
401: NTSPFLSRFV ETLDYYTAMF ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP VSTSAAFAAS EMLKAYDKNY
501: KLGGHEGALY LFWKRRPMAT CSVWKPNPN
101: SLAYDEAGVK SKIRELEVSL LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV LEQMVSVSGS PIQRLGTYMA
201: EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301: SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT
401: NTSPFLSRFV ETLDYYTAMF ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP VSTSAAFAAS EMLKAYDKNY
501: KLGGHEGALY LFWKRRPMAT CSVWKPNPN
Arabidopsis Description
SCL13SCARECROW-like 13 [Source:TAIR;Acc:AT4G17230]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.