Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36572 | Soybean | cytosol | 94.02 | 94.71 |
| KRH01979 | Soybean | cytosol | 74.64 | 75.6 |
| KRH51175 | Soybean | cytosol | 74.09 | 75.46 |
| VIT_00s0463g00020.t01 | Wine grape | nucleus | 67.39 | 68.26 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 37.5 | 63.11 |
| PGSC0003DMT400034763 | Potato | cytosol | 60.14 | 62.17 |
| Solyc11g012510.1.1 | Tomato | mitochondrion | 60.69 | 61.81 |
| AT4G17230.1 | Thale cress | cytosol | 58.33 | 60.87 |
| PGSC0003DMT400021748 | Potato | nucleus | 61.59 | 60.82 |
| Bra021063.1-P | Field mustard | plastid | 57.97 | 60.38 |
| CDY58168 | Canola | plastid | 57.97 | 60.38 |
| CDY50128 | Canola | cytosol, plastid | 57.79 | 59.85 |
| KRH74015 | Soybean | cytosol | 58.33 | 59.52 |
| KRH14104 | Soybean | cytosol | 58.15 | 58.9 |
| PGSC0003DMT400060553 | Potato | cytosol | 55.8 | 58.78 |
| CDY35589 | Canola | cytosol | 56.52 | 58.76 |
| Bra026237.1-P | Field mustard | plastid | 56.88 | 58.69 |
| CDY42968 | Canola | cytosol | 56.88 | 58.69 |
| Solyc04g014830.1.1 | Tomato | mitochondrion | 56.16 | 56.06 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 42.75 | 55.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.57 | 54.91 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 49.64 | 54.69 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 38.95 | 54.16 |
| KRH73868 | Soybean | cytosol | 52.72 | 53.39 |
| Os07t0583600-01 | Rice | plasma membrane | 51.81 | 52.57 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 52.72 | 52.53 |
| KRH14274 | Soybean | cytosol | 51.63 | 52.29 |
| Zm00001d030500_P001 | Maize | nucleus | 51.27 | 52.21 |
| Zm00001d006701_P001 | Maize | cytosol | 51.99 | 51.81 |
| KRG98562 | Soybean | nucleus | 51.09 | 51.74 |
| EER97449 | Sorghum | cytosol | 51.27 | 51.74 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 51.63 | 51.35 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 51.81 | 51.35 |
| Os03t0193000-01 | Rice | plastid | 49.46 | 51.03 |
| KRH46306 | Soybean | cytosol | 50.36 | 51.01 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 51.09 | 50.9 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 50.54 | 50.73 |
| Zm00001d021946_P001 | Maize | cytosol | 51.27 | 50.72 |
| EER95348 | Sorghum | cytosol | 48.91 | 50.37 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 48.91 | 50.37 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 48.73 | 50.19 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 48.73 | 50.19 |
| Solyc05g054170.2.1 | Tomato | mitochondrion, nucleus | 30.07 | 49.85 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 43.84 | 49.49 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 48.01 | 49.35 |
| HORVU5Hr1G099160.1 | Barley | plastid | 50.72 | 44.44 |
| KRH38269 | Soybean | cytosol | 28.26 | 44.19 |
| KRH25905 | Soybean | cytosol, plastid | 43.48 | 42.25 |
| KRH27129 | Soybean | plastid | 42.93 | 42.25 |
| KRH22210 | Soybean | cytosol, plastid | 44.02 | 42.11 |
| KRH55599 | Soybean | plastid | 43.3 | 42.08 |
| KRH15917 | Soybean | cytosol | 39.67 | 37.06 |
| KRH18097 | Soybean | cytosol | 39.67 | 37.06 |
| KRH64568 | Soybean | cytosol | 39.13 | 36.24 |
| KRH53364 | Soybean | cytosol | 39.13 | 36.0 |
| KRH35251 | Soybean | plastid | 28.08 | 26.27 |
| KRG91573 | Soybean | plastid | 28.08 | 26.09 |
| KRH38397 | Soybean | plastid | 24.64 | 25.19 |
| KRH08880 | Soybean | plastid | 28.8 | 24.2 |
| KRH10243 | Soybean | nucleus | 27.17 | 22.56 |
| KRH23089 | Soybean | cytosol | 25.91 | 22.2 |
| KRH29773 | Soybean | cytosol | 24.46 | 21.99 |
| KRH24773 | Soybean | nucleus | 27.36 | 21.98 |
| KRH29771 | Soybean | cytosol | 26.99 | 21.91 |
| KRH10240 | Soybean | cytosol | 23.91 | 21.78 |
| KRH24780 | Soybean | cytosol | 25.91 | 21.67 |
| KRH23090 | Soybean | vacuole | 24.09 | 21.42 |
| KRH29774 | Soybean | cytosol | 24.46 | 21.39 |
| KRH29775 | Soybean | nucleus | 25.0 | 20.51 |
| KRH23095 | Soybean | cytosol | 24.09 | 20.24 |
| KRH24775 | Soybean | cytosol | 24.64 | 20.0 |
| KRH29779 | Soybean | cytosol | 26.81 | 19.95 |
| KRH23094 | Soybean | cytosol | 19.93 | 19.89 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 26.45 | 19.65 |
| KRH49113 | Soybean | cytosol | 25.91 | 19.48 |
| KRG99969 | Soybean | cytosol | 25.91 | 19.4 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 24.09 | 19.33 |
| KRH24778 | Soybean | nucleus | 23.37 | 19.08 |
| KRH65839 | Soybean | cytosol, plastid | 25.18 | 19.04 |
Protein Annotations
| EntrezGene:100819190 | MapMan:15.5.12 | EMBL:ACUP02009215 | EnsemblPlantsGene:GLYMA_15G116300 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1MFQ0 | InterPro:IPR005202 | EnsemblPlants:KRH11548 |
| ProteinID:KRH11548 | ProteinID:KRH11548.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF45 |
| InterPro:Scarecrow-like_13 | InterPro:TF_GRAS | UniParc:UPI000233B5C7 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr15:-:9141617..9145667
Molecular Weight (calculated)
61693.6 Da
IEP (calculated)
5.837
GRAVY (calculated)
-0.347
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTSQKHPTS AGIHLYHQPA QDIDPYTHYQ ILQSNSCHEI HDNSSSQGTT ISFETSKDQY FTLESSPVIN DLIGCDSPSY ASVSSNRSPF SPQASHSYHS
101: DQHQSSDNTY GSPTSSHSTA DDSYELKNKL RELEISLLGP DSDIVDSCHC SYKGGCHGAS PMAKYNWDQI VEMIPKLNLK EVLIRCAQAV ADDDIETAVG
201: FMNNVLAKMV SVGGDPIQRL GAYMLEGLRA RLESSGSIIY KALKCEQPTS NDLMTYMHIL YQICPYWKFA YTSANAVIGE AMLNESRIRI IDFQIAQGTQ
301: WLLLIQALAS RPGGPPFVHV TGVDDSQSFH ARGGGLHIVG KRLSDYAKSC GVPFEFHSAA MCGSEVELEN LVIQPGEALV VNFPFVLHHM PDESVSTENH
401: RDRLLRLVKS LSPKVVTLVE QESNTNTSPF FQRFAETLSY YTAMFESIDV ALPRDDKQRI NAEQHCVARD IVNMVACEGD ERVERHELLG KWRSRFSMAG
501: FAPCPLSSLV TDAVRNMLNE FNENYRLEYR DGALYLGWKN RAMCTSSAWR CY
101: DQHQSSDNTY GSPTSSHSTA DDSYELKNKL RELEISLLGP DSDIVDSCHC SYKGGCHGAS PMAKYNWDQI VEMIPKLNLK EVLIRCAQAV ADDDIETAVG
201: FMNNVLAKMV SVGGDPIQRL GAYMLEGLRA RLESSGSIIY KALKCEQPTS NDLMTYMHIL YQICPYWKFA YTSANAVIGE AMLNESRIRI IDFQIAQGTQ
301: WLLLIQALAS RPGGPPFVHV TGVDDSQSFH ARGGGLHIVG KRLSDYAKSC GVPFEFHSAA MCGSEVELEN LVIQPGEALV VNFPFVLHHM PDESVSTENH
401: RDRLLRLVKS LSPKVVTLVE QESNTNTSPF FQRFAETLSY YTAMFESIDV ALPRDDKQRI NAEQHCVARD IVNMVACEGD ERVERHELLG KWRSRFSMAG
501: FAPCPLSSLV TDAVRNMLNE FNENYRLEYR DGALYLGWKN RAMCTSSAWR CY
001: MQTSQKHHSA AGLHMLYPQV YCSPQFQAKD NKGFSDIPSK ENFFTLESST ASGSLPSYDS PSVSITSGRS PFSPQGSQSC ISDLHHSPDN VYGSPLSGVS
101: SLAYDEAGVK SKIRELEVSL LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV LEQMVSVSGS PIQRLGTYMA
201: EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301: SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT
401: NTSPFLSRFV ETLDYYTAMF ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP VSTSAAFAAS EMLKAYDKNY
501: KLGGHEGALY LFWKRRPMAT CSVWKPNPN
101: SLAYDEAGVK SKIRELEVSL LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV LEQMVSVSGS PIQRLGTYMA
201: EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301: SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT
401: NTSPFLSRFV ETLDYYTAMF ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP VSTSAAFAAS EMLKAYDKNY
501: KLGGHEGALY LFWKRRPMAT CSVWKPNPN
Arabidopsis Description
SCL13SCARECROW-like 13 [Source:TAIR;Acc:AT4G17230]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.