Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46306 | Soybean | cytosol | 94.31 | 94.31 |
| KRH73868 | Soybean | cytosol | 72.48 | 72.48 |
| KRH14274 | Soybean | cytosol | 72.11 | 72.11 |
| Bra026077.1-P | Field mustard | cytosol | 37.25 | 69.05 |
| KRH38269 | Soybean | cytosol | 43.67 | 67.42 |
| VIT_19s0090g01740.t01 | Wine grape | cytosol | 63.67 | 63.67 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 37.43 | 62.2 |
| CDY22807 | Canola | nucleus | 47.34 | 61.43 |
| CDY37124 | Canola | nucleus | 47.34 | 61.43 |
| CDY71156 | Canola | cytosol, plastid | 43.49 | 60.77 |
| KRH14104 | Soybean | cytosol | 59.27 | 59.27 |
| KRH74015 | Soybean | cytosol | 58.72 | 59.15 |
| Bra018860.1-P | Field mustard | nucleus | 55.6 | 57.71 |
| CDY07309 | Canola | cytosol | 25.32 | 57.5 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 41.83 | 57.43 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 44.77 | 57.28 |
| Solyc07g065270.1.1 | Tomato | nucleus | 55.78 | 56.51 |
| PGSC0003DMT400057111 | Potato | nucleus | 55.05 | 55.87 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 51.01 | 55.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.3 | 55.14 |
| Zm00001d030500_P001 | Maize | nucleus | 52.11 | 52.4 |
| Os03t0193000-01 | Rice | plastid | 51.38 | 52.34 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 52.29 | 51.82 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 50.83 | 51.68 |
| KRH51175 | Soybean | cytosol | 51.19 | 51.48 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 52.29 | 51.44 |
| EER97449 | Sorghum | cytosol | 51.56 | 51.37 |
| KRH11548 | Soybean | nucleus | 51.74 | 51.09 |
| Os07t0583600-01 | Rice | plasma membrane | 50.83 | 50.92 |
| AT1G50600.2 | Thale cress | golgi, mitochondrion | 56.15 | 50.92 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 51.74 | 50.63 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 51.38 | 50.54 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 51.38 | 50.45 |
| EER95348 | Sorghum | cytosol | 49.54 | 50.37 |
| KRH36572 | Soybean | cytosol | 50.64 | 50.37 |
| Zm00001d006701_P001 | Maize | cytosol | 51.19 | 50.36 |
| Zm00001d021946_P001 | Maize | cytosol | 51.56 | 50.36 |
| KRH01979 | Soybean | cytosol | 50.28 | 50.28 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 48.81 | 49.63 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 48.81 | 49.63 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 44.04 | 49.08 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 47.52 | 48.23 |
| HORVU5Hr1G099160.1 | Barley | plastid | 52.11 | 45.08 |
| KRH25905 | Soybean | cytosol, plastid | 45.87 | 44.01 |
| KRH55599 | Soybean | plastid | 45.69 | 43.84 |
| KRH22210 | Soybean | cytosol, plastid | 45.69 | 43.15 |
| KRH27129 | Soybean | plastid | 44.22 | 42.96 |
| KRH15917 | Soybean | cytosol | 38.35 | 35.36 |
| KRH18097 | Soybean | cytosol | 38.35 | 35.36 |
| KRH64568 | Soybean | cytosol | 37.61 | 34.4 |
| KRH53364 | Soybean | cytosol | 37.43 | 34.0 |
| KRH35251 | Soybean | plastid | 27.71 | 25.59 |
| KRG91573 | Soybean | plastid | 27.52 | 25.25 |
| KRH29773 | Soybean | cytosol | 26.24 | 23.29 |
| KRH08880 | Soybean | plastid | 27.34 | 22.68 |
| KRH38397 | Soybean | plastid | 22.39 | 22.59 |
| KRH29774 | Soybean | cytosol | 25.5 | 22.03 |
| KRH10243 | Soybean | nucleus | 26.79 | 21.95 |
| KRH23089 | Soybean | cytosol | 25.69 | 21.74 |
| KRH29775 | Soybean | nucleus | 26.42 | 21.4 |
| KRH24775 | Soybean | cytosol | 26.61 | 21.32 |
| KRH10240 | Soybean | cytosol | 23.49 | 21.12 |
| KRH23090 | Soybean | vacuole | 24.04 | 21.09 |
| KRH29771 | Soybean | cytosol | 26.24 | 21.03 |
| KRH23094 | Soybean | cytosol | 21.1 | 20.8 |
| KRH24778 | Soybean | nucleus | 25.32 | 20.41 |
| KRH65839 | Soybean | cytosol, plastid | 27.16 | 20.27 |
| KRH24773 | Soybean | nucleus | 25.5 | 20.23 |
| KRH49113 | Soybean | cytosol | 27.16 | 20.16 |
| KRH24780 | Soybean | cytosol | 24.4 | 20.15 |
| KRG99969 | Soybean | cytosol | 26.97 | 19.95 |
| KRH23095 | Soybean | cytosol | 24.04 | 19.94 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 27.16 | 19.92 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 24.95 | 19.77 |
| KRH29779 | Soybean | cytosol | 25.32 | 18.6 |
Protein Annotations
| EntrezGene:100785400 | MapMan:15.5.12 | EMBL:ACUP02010899 | EnsemblPlantsGene:GLYMA_18G081100 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1N0D2 | InterPro:IPR005202 | EnsemblPlants:KRG98562 |
| ProteinID:KRG98562 | ProteinID:KRG98562.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF57 |
| InterPro:TF_GRAS | UniParc:UPI000233E3E7 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:7827135..7830945
Molecular Weight (calculated)
61192.2 Da
IEP (calculated)
5.026
GRAVY (calculated)
-0.347
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTSQNHKIS YGSGGFYVEP VQNLESYCMP SSENIDNYSS SDNSSQTTYP SVQTLEQYCT LESASTGNSF PNQNSPPALS FSSNNSPLSK LESNSYVLRP
101: QHSLEIASGS PEDDSYLTHD LDDLTHKIRE LETAMLGPNA DMLDIYGTVI PEPDSFLLEA EKWKKLMEMS SRGDLKEMLY TCAEAMARND METTDWLVSE
201: LRKMVSISGN PIQRLGAYIL ESFVARMAAS GSTIYKSLKC SEPTGNELLS YMHVLYEICP YFKFGYMSAN GAIAEALKEE SEVHIVDFQI GQGTQWVSLI
301: QALAHRPGGP PKIRISGVDD SYSAYARGGG LDIVGKRLSA HAQSCHVPFE FNAVRVPASQ VQLEDLELLP YEAVAVNFAI SLHHVPDESV NSHNHRDRLL
401: RLAKRLSPKV VTLVEQEFNT NNAPFLQRFD ETMKYYLAVF ESIDTVLPRE HKERINVEQH CLAREVVNLI ACEGEERVER HELLNKWKMR FTKAGFTPYP
501: LSSVINSSIK DLLQSYHGHY TLEERDGALF LGWMNQVLIA SCAWS
101: QHSLEIASGS PEDDSYLTHD LDDLTHKIRE LETAMLGPNA DMLDIYGTVI PEPDSFLLEA EKWKKLMEMS SRGDLKEMLY TCAEAMARND METTDWLVSE
201: LRKMVSISGN PIQRLGAYIL ESFVARMAAS GSTIYKSLKC SEPTGNELLS YMHVLYEICP YFKFGYMSAN GAIAEALKEE SEVHIVDFQI GQGTQWVSLI
301: QALAHRPGGP PKIRISGVDD SYSAYARGGG LDIVGKRLSA HAQSCHVPFE FNAVRVPASQ VQLEDLELLP YEAVAVNFAI SLHHVPDESV NSHNHRDRLL
401: RLAKRLSPKV VTLVEQEFNT NNAPFLQRFD ETMKYYLAVF ESIDTVLPRE HKERINVEQH CLAREVVNLI ACEGEERVER HELLNKWKMR FTKAGFTPYP
501: LSSVINSSIK DLLQSYHGHY TLEERDGALF LGWMNQVLIA SCAWS
001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.