CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14104	Soybean	cytosol	96.49	95.78
VIT_12s0057g00560.t01	Wine grape	cytosol	82.62	82.02
PGSC0003DMT400015696	Potato	cytosol	72.83	73.64
Solyc07g047950.1.1	Tomato	mitochondrion	73.01	72.48
AT5G48150.4	Thale cress	cytosol	64.69	71.43
GSMUA_Achr4P07010_001	Banana	cytosol	43.07	71.04
CDX86324	Canola	cytosol, nucleus, plastid	64.33	70.02
CDY54511	Canola	cytosol, nucleus, plastid	63.59	69.22
Bra020715.1-P	Field mustard	cytosol, plastid	63.4	69.01
CDY71174	Canola	cytosol, plastid	63.4	69.01
CDY05700	Canola	cytosol, plastid	63.22	68.81
CDY19966	Canola	cytosol	62.48	68.42
Bra036185.1-P	Field mustard	cytosol	62.48	68.28
CDY00074	Canola	cytosol, plastid	62.48	68.01
GSMUA_AchrUn_...	Banana	nucleus	51.02	64.49
GSMUA_Achr4P11050_001	Banana	nucleus	46.58	63.48
TraesCS5A01G414000.1	Wheat	cytosol	48.24	61.27
TraesCS5A01G409800.1	Wheat	nucleus, plastid	55.64	60.08
KRH73868	Soybean	cytosol	60.07	59.63
KRH14274	Soybean	cytosol	59.89	59.45
KRG98562	Soybean	nucleus	59.15	58.72
KRH51175	Soybean	cytosol	58.6	58.49
Os07t0583600-01	Rice	plasma membrane	58.78	58.46
KRH11548	Soybean	nucleus	59.52	58.33
KRH46306	Soybean	cytosol	58.23	57.8
KRH01979	Soybean	cytosol	58.04	57.61
KRH36572	Soybean	cytosol	58.23	57.48
TraesCS2B01G217500.1	Wheat	cytosol	58.78	57.4
HORVU2Hr1G036280.1	Barley	cytosol	58.96	57.27
TraesCS5D01G419400.2	Wheat	cytosol	57.86	56.91
EER97449	Sorghum	cytosol	57.3	56.67
TraesCS2D01G198200.1	Wheat	cytosol	57.86	56.4
TraesCS2A01G189600.1	Wheat	cytosol	57.49	56.14
Os03t0193000-01	Rice	plastid	55.45	56.07
Zm00001d006701_P001	Maize	cytosol	57.3	55.96
Zm00001d030500_P001	Maize	nucleus	56.01	55.9
Zm00001d021946_P001	Maize	cytosol	56.93	55.2
Zm00001d048199_P001	Maize	mitochondrion, nucleus	54.53	55.04
EER95348	Sorghum	cytosol	54.53	55.04
HORVU4Hr1G071670.1	Barley	cytosol	53.97	54.48
TraesCS4D01G266400.1	Wheat	cytosol	53.42	53.92
TraesCS4B01G266700.1	Wheat	cytosol	53.42	53.82
KRH38269	Soybean	cytosol	34.94	53.54
TraesCS4A01G039000.1	Wheat	nucleus	47.87	52.97
HORVU5Hr1G099160.1	Barley	plastid	57.67	49.52
KRH55599	Soybean	plastid	48.98	46.65
KRH25905	Soybean	cytosol, plastid	48.98	46.65
KRH27129	Soybean	plastid	48.24	46.52
KRH22210	Soybean	cytosol, plastid	49.17	46.1
KRH18097	Soybean	cytosol	43.99	40.27
KRH15917	Soybean	cytosol	43.44	39.76
KRH64568	Soybean	cytosol	43.07	39.09
KRH53364	Soybean	cytosol	43.25	39.0
KRG91573	Soybean	plastid	30.13	27.44
KRH35251	Soybean	plastid	29.76	27.29
KRH38397	Soybean	plastid	25.51	25.56
KRH08880	Soybean	plastid	30.5	25.11
KRH29774	Soybean	cytosol	26.25	22.5
KRH10240	Soybean	cytosol	24.95	22.28
KRH23089	Soybean	cytosol	26.43	22.2
KRH29773	Soybean	cytosol	25.14	22.15
KRH24780	Soybean	cytosol	26.99	22.12
KRH10243	Soybean	nucleus	26.62	21.65
KRH29771	Soybean	cytosol	26.99	21.47
KRH29775	Soybean	nucleus	26.62	21.4
KRH23094	Soybean	cytosol	21.81	21.34
KRH23095	Soybean	cytosol	25.88	21.31
KRH23090	Soybean	vacuole	24.4	21.26
KRH24773	Soybean	nucleus	26.99	21.25
KRG99969	Soybean	cytosol	28.28	20.76
KRH65839	Soybean	cytosol, plastid	27.91	20.68
KRH24775	Soybean	cytosol	25.88	20.59
KRH49113	Soybean	cytosol	27.91	20.57
KRH24778	Soybean	nucleus	24.58	19.67
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	26.99	19.65
KRH29779	Soybean	cytosol	26.8	19.54
KRH10241	Soybean	cytosol, nucleus, peroxisome	24.77	19.48

Protein Annotations

EntrezGene:100796496	MapMan:15.5.12	EMBL:ACUP02001293	EnsemblPlantsGene:GLYMA_02G306200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1JJQ8	InterPro:IPR005202	EnsemblPlants:KRH74015
ProteinID:KRH74015	ProteinID:KRH74015.1	ProteinID:KRH74016.1	ProteinID:KRH74017.1	ProteinID:KRH74018.1	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF57	InterPro:TF_GRAS	UniParc:UPI0002337768	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:48088200..48091782

Molecular Weight (calculated)

60730.0 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.314

Length

541 amino acids

Sequence
(BLAST)

001: MQASEQHRNS SMYYQPLQQI EAYCLPQYRT LNPQLYYHDG GHGTQFSTPS SSELYCTLES SSVALYNSPS TVSFSPNGSP ISQQDSQSYP PDQYHSPENT
101: YGSPMSGSCI TDDLSSFNLK HKLRELESVM LGPDSDNLDS YDSAISNGNN FVPLEMDGWK QTMVAISSKN LKHILIACAK AISDDDLLMA QWLMDELRQM
201: VSVSGDPFQR LGAYMLEGLV ARLAASGSSI YKSLRCKEPE SAELLSYMHI LYEVCPYFKF GYMSANGAIA EAMKDEDRVH IIDFQIGQGS QWITLIQAFA
301: ARPGGPPHIR ITGIDDSTSA YARGGGLHIV GRRLSKLAEH FKVPFEFHAA AISGCDVQLH NLGVRPGEAL AVNFAFMLHH MPDESVSTQN HRDRLLRLVR
401: SLSPKVVTLV EQESNTNTAA FFPRFLETLD YYTAMFESID VTLSREHKER INVEQHCLAR DLVNIIACEG VERVERHEVL GKWRSRFAMA GFTPYPLSSL
501: VNGTIKKLLE NYSDRYRLQE RDGALYLGWM NRDLVASCAW K

Best Arabidopsis Sequence Match ( AT5G48150.3 )
(BLAST)

001: MYKQPRQELE AYYFEPNSVE KLRYLPVNNS RKRFCTLEPF PDSPPYNALS TATYDDTCGS CVTDELNDFK HKIREIETVM MGPDSLDLLV DCTDSFDSTA
101: SQEINGWRST LEAISRRDLR ADLVSCAKAM SENDLMMAHS MMEKLRQMVS VSGEPIQRLG AYLLEGLVAQ LASSGSSIYK ALNRCPEPAS TELLSYMHIL
201: YEVCPYFKFG YMSANGAIAE AMKEENRVHI IDFQIGQGSQ WVTLIQAFAA RPGGPPRIRI TGIDDMTSAY ARGGGLSIVG NRLAKLAKQF NVPFEFNSVS
301: VSVSEVKPKN LGVRPGEALA VNFAFVLHHM PDESVSTENH RDRLLRMVKS LSPKVVTLVE QESNTNTAAF FPRFMETMNY YAAMFESIDV TLPRDHKQRI
401: NVEQHCLARD VVNIIACEGA DRVERHELLG KWRSRFGMAG FTPYPLSPLV NSTIKSLLRN YSDKYRLEER DGALYLGWMH RDLVASCAWK

Arabidopsis Description

PAT1Scarecrow-like transcription factor PAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.