Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11548 | Soybean | nucleus | 94.71 | 94.02 |
| KRH01979 | Soybean | cytosol | 74.82 | 75.23 |
| KRH51175 | Soybean | cytosol | 74.27 | 75.09 |
| VIT_00s0463g00020.t01 | Wine grape | nucleus | 68.07 | 68.44 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 37.41 | 62.5 |
| PGSC0003DMT400034763 | Potato | cytosol | 59.85 | 61.42 |
| Solyc11g012510.1.1 | Tomato | mitochondrion | 60.22 | 60.89 |
| AT4G17230.1 | Thale cress | cytosol | 58.76 | 60.87 |
| CDY58168 | Canola | plastid | 58.39 | 60.38 |
| Bra021063.1-P | Field mustard | plastid | 58.39 | 60.38 |
| CDY50128 | Canola | cytosol, plastid | 58.58 | 60.23 |
| PGSC0003DMT400021748 | Potato | nucleus | 60.95 | 59.75 |
| CDY35589 | Canola | cytosol | 57.12 | 58.95 |
| CDY42968 | Canola | cytosol | 57.48 | 58.88 |
| Bra026237.1-P | Field mustard | plastid | 57.48 | 58.88 |
| PGSC0003DMT400060553 | Potato | cytosol | 55.84 | 58.4 |
| KRH74015 | Soybean | cytosol | 57.48 | 58.23 |
| KRH14104 | Soybean | cytosol | 56.93 | 57.25 |
| Solyc04g014830.1.1 | Tomato | mitochondrion | 56.02 | 55.52 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 42.7 | 54.93 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 49.45 | 54.09 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 38.87 | 53.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.79 | 53.5 |
| KRH73868 | Soybean | cytosol | 52.37 | 52.66 |
| KRH14274 | Soybean | cytosol | 51.46 | 51.74 |
| Zm00001d030500_P001 | Maize | nucleus | 51.09 | 51.66 |
| Os07t0583600-01 | Rice | plasma membrane | 51.28 | 51.65 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 51.82 | 51.26 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 51.46 | 50.81 |
| KRG98562 | Soybean | nucleus | 50.37 | 50.64 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 51.09 | 50.54 |
| Zm00001d006701_P001 | Maize | cytosol | 51.09 | 50.54 |
| EER97449 | Sorghum | cytosol | 50.18 | 50.27 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 51.09 | 50.27 |
| KRH46306 | Soybean | cytosol | 49.82 | 50.09 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 50.18 | 50.0 |
| Os03t0193000-01 | Rice | plastid | 48.72 | 49.91 |
| Zm00001d021946_P001 | Maize | cytosol | 50.73 | 49.82 |
| EER95348 | Sorghum | cytosol | 48.72 | 49.81 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 48.54 | 49.63 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 48.18 | 49.25 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 47.99 | 49.07 |
| Solyc05g054170.2.1 | Tomato | mitochondrion, nucleus | 29.74 | 48.95 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 43.61 | 48.88 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 47.26 | 48.23 |
| HORVU5Hr1G099160.1 | Barley | plastid | 50.55 | 43.97 |
| KRH38269 | Soybean | cytosol | 28.28 | 43.91 |
| KRH25905 | Soybean | cytosol, plastid | 43.25 | 41.73 |
| KRH27129 | Soybean | plastid | 42.7 | 41.71 |
| KRH22210 | Soybean | cytosol, plastid | 43.8 | 41.59 |
| KRH55599 | Soybean | plastid | 43.07 | 41.55 |
| KRH18097 | Soybean | cytosol | 39.78 | 36.89 |
| KRH15917 | Soybean | cytosol | 39.6 | 36.72 |
| KRH64568 | Soybean | cytosol | 38.69 | 35.57 |
| KRH53364 | Soybean | cytosol | 38.87 | 35.5 |
| KRG91573 | Soybean | plastid | 28.1 | 25.93 |
| KRH35251 | Soybean | plastid | 27.74 | 25.76 |
| KRH38397 | Soybean | plastid | 24.64 | 25.0 |
| KRH08880 | Soybean | plastid | 28.65 | 23.9 |
| KRH10243 | Soybean | nucleus | 27.37 | 22.56 |
| KRH23089 | Soybean | cytosol | 26.28 | 22.36 |
| KRH29773 | Soybean | cytosol | 24.64 | 21.99 |
| KRH10240 | Soybean | cytosol | 24.09 | 21.78 |
| KRH29771 | Soybean | cytosol | 27.01 | 21.76 |
| KRH24773 | Soybean | nucleus | 27.19 | 21.69 |
| KRH24780 | Soybean | cytosol | 26.09 | 21.67 |
| KRH23090 | Soybean | vacuole | 24.45 | 21.58 |
| KRH29774 | Soybean | cytosol | 24.82 | 21.55 |
| KRH29775 | Soybean | nucleus | 25.36 | 20.65 |
| KRH23095 | Soybean | cytosol | 24.27 | 20.24 |
| KRH23094 | Soybean | cytosol | 20.26 | 20.07 |
| KRH24775 | Soybean | cytosol | 24.82 | 20.0 |
| KRH29779 | Soybean | cytosol | 26.82 | 19.81 |
| KRH49113 | Soybean | cytosol | 26.28 | 19.62 |
| KRG99969 | Soybean | cytosol | 26.28 | 19.54 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 26.46 | 19.52 |
| KRH24778 | Soybean | nucleus | 23.72 | 19.23 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 24.09 | 19.19 |
| KRH65839 | Soybean | cytosol, plastid | 25.18 | 18.9 |
Protein Annotations
| EntrezGene:100817987 | MapMan:15.5.12 | EMBL:ACUP02005381 | EnsemblPlantsGene:GLYMA_09G011800 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1L013 | InterPro:IPR005202 | EnsemblPlants:KRH36572 |
| ProteinID:KRH36572 | ProteinID:KRH36572.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF45 |
| InterPro:Scarecrow-like_13 | InterPro:TF_GRAS | UniParc:UPI000233CC16 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:899450..903293
Molecular Weight (calculated)
61278.2 Da
IEP (calculated)
6.228
GRAVY (calculated)
-0.366
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTSKKHPTS AGIHLYLQPA QDIDPYTHYQ ILQSNSCHDN SSSQGTTISF ETSKEQYFTL ESSPAINDLI GCDSPSYASV SSNRSPFSPQ ASHSDQHQSS
101: DNTYGSPTSA HSRYDDDGYE LKNKLRELEI SLLGPDSDIV DSWHCSYKGG RHRASSPTAK HNWDQIVEMI PKLDLKEVLI RCAQAVADDD IETAVGFMNN
201: VLAKMVSVGG DPIQRLGAYM LEGLRARLES SGSIIYKALK CEQPTSNDLM TYMHILYQIC PYWKFAYTSA NAVIGEAMLN ESRIHIIDFQ VAQGTQWLLL
301: IQALASRPGG APFIRVTGVD DSQSFHARGG GLHIVGKRLS DYAKSCGVPF EFHSAAMCGS ELELENLVIQ PGEALVVNFP FVLHHMPDES VSTENHRDRL
401: LRLVKSLSPK VVTLVEQESN TNTSPFFQRF VETLSYYTAM FESIDVALPR DDKQRINAEQ HCVARDIVNM VACEGDERLE RHELLGKWRS RFSMAGFAPC
501: PLSSSVTAAV RNMLNEFNEN YRLQHRDGAL YLGWKSRAMC TSSAWRCY
101: DNTYGSPTSA HSRYDDDGYE LKNKLRELEI SLLGPDSDIV DSWHCSYKGG RHRASSPTAK HNWDQIVEMI PKLDLKEVLI RCAQAVADDD IETAVGFMNN
201: VLAKMVSVGG DPIQRLGAYM LEGLRARLES SGSIIYKALK CEQPTSNDLM TYMHILYQIC PYWKFAYTSA NAVIGEAMLN ESRIHIIDFQ VAQGTQWLLL
301: IQALASRPGG APFIRVTGVD DSQSFHARGG GLHIVGKRLS DYAKSCGVPF EFHSAAMCGS ELELENLVIQ PGEALVVNFP FVLHHMPDES VSTENHRDRL
401: LRLVKSLSPK VVTLVEQESN TNTSPFFQRF VETLSYYTAM FESIDVALPR DDKQRINAEQ HCVARDIVNM VACEGDERLE RHELLGKWRS RFSMAGFAPC
501: PLSSSVTAAV RNMLNEFNEN YRLQHRDGAL YLGWKSRAMC TSSAWRCY
001: MQTSQKHHSA AGLHMLYPQV YCSPQFQAKD NKGFSDIPSK ENFFTLESST ASGSLPSYDS PSVSITSGRS PFSPQGSQSC ISDLHHSPDN VYGSPLSGVS
101: SLAYDEAGVK SKIRELEVSL LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV LEQMVSVSGS PIQRLGTYMA
201: EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301: SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT
401: NTSPFLSRFV ETLDYYTAMF ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP VSTSAAFAAS EMLKAYDKNY
501: KLGGHEGALY LFWKRRPMAT CSVWKPNPN
101: SLAYDEAGVK SKIRELEVSL LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV LEQMVSVSGS PIQRLGTYMA
201: EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301: SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT
401: NTSPFLSRFV ETLDYYTAMF ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP VSTSAAFAAS EMLKAYDKNY
501: KLGGHEGALY LFWKRRPMAT CSVWKPNPN
Arabidopsis Description
SCL13SCARECROW-like 13 [Source:TAIR;Acc:AT4G17230]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.