Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14274 | Soybean | cytosol | 93.76 | 93.76 |
| KRH38269 | Soybean | cytosol | 57.8 | 89.24 |
| KRH46306 | Soybean | cytosol | 72.66 | 72.66 |
| KRG98562 | Soybean | nucleus | 72.48 | 72.48 |
| Bra026077.1-P | Field mustard | cytosol | 38.17 | 70.75 |
| CDY71156 | Canola | cytosol, plastid | 45.87 | 64.1 |
| CDY22807 | Canola | nucleus | 48.99 | 63.57 |
| CDY37124 | Canola | nucleus | 48.99 | 63.57 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 37.8 | 62.8 |
| VIT_19s0090g01740.t01 | Wine grape | cytosol | 62.39 | 62.39 |
| CDY07309 | Canola | cytosol | 27.16 | 61.67 |
| KRH74015 | Soybean | cytosol | 59.63 | 60.07 |
| Bra018860.1-P | Field mustard | nucleus | 57.8 | 60.0 |
| KRH14104 | Soybean | cytosol | 59.63 | 59.63 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 44.95 | 57.51 |
| Solyc07g065270.1.1 | Tomato | nucleus | 56.51 | 57.25 |
| PGSC0003DMT400057111 | Potato | nucleus | 56.33 | 57.17 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 41.28 | 56.68 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 51.56 | 56.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.75 | 54.44 |
| Zm00001d030500_P001 | Maize | nucleus | 53.95 | 54.24 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 53.21 | 52.73 |
| KRH11548 | Soybean | nucleus | 53.39 | 52.72 |
| AT1G50600.2 | Thale cress | golgi, mitochondrion | 57.98 | 52.58 |
| KRH36572 | Soybean | cytosol | 52.66 | 52.37 |
| KRH51175 | Soybean | cytosol | 51.56 | 51.84 |
| Os03t0193000-01 | Rice | plastid | 50.64 | 51.59 |
| EER97449 | Sorghum | cytosol | 51.74 | 51.55 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 50.28 | 51.12 |
| Os07t0583600-01 | Rice | plasma membrane | 51.01 | 51.1 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 50.09 | 50.93 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 50.09 | 50.93 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 45.69 | 50.92 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 51.56 | 50.72 |
| KRH01979 | Soybean | cytosol | 50.64 | 50.64 |
| Zm00001d006701_P001 | Maize | cytosol | 51.38 | 50.54 |
| EER95348 | Sorghum | cytosol | 49.17 | 50.0 |
| Zm00001d021946_P001 | Maize | cytosol | 51.19 | 50.0 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 51.01 | 49.91 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 50.64 | 49.73 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 48.99 | 49.72 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 50.46 | 49.64 |
| HORVU5Hr1G099160.1 | Barley | plastid | 53.21 | 46.03 |
| KRH55599 | Soybean | plastid | 45.5 | 43.66 |
| KRH25905 | Soybean | cytosol, plastid | 45.32 | 43.49 |
| KRH22210 | Soybean | cytosol, plastid | 44.4 | 41.94 |
| KRH27129 | Soybean | plastid | 42.75 | 41.53 |
| KRH18097 | Soybean | cytosol | 38.9 | 35.87 |
| KRH15917 | Soybean | cytosol | 38.9 | 35.87 |
| KRH53364 | Soybean | cytosol | 38.9 | 35.33 |
| KRH64568 | Soybean | cytosol | 38.53 | 35.23 |
| KRH29773 | Soybean | cytosol | 26.79 | 23.78 |
| KRH35251 | Soybean | plastid | 25.5 | 23.56 |
| KRG91573 | Soybean | plastid | 25.5 | 23.4 |
| KRH10243 | Soybean | nucleus | 27.34 | 22.41 |
| KRH29774 | Soybean | cytosol | 25.87 | 22.35 |
| KRH29775 | Soybean | nucleus | 27.52 | 22.29 |
| KRH24775 | Soybean | cytosol | 27.16 | 21.76 |
| KRH10240 | Soybean | cytosol | 24.04 | 21.62 |
| KRH08880 | Soybean | plastid | 25.87 | 21.46 |
| KRH23090 | Soybean | vacuole | 24.4 | 21.42 |
| KRH23089 | Soybean | cytosol | 24.95 | 21.12 |
| KRH38397 | Soybean | plastid | 20.92 | 21.11 |
| KRH29771 | Soybean | cytosol | 26.05 | 20.88 |
| KRH65839 | Soybean | cytosol, plastid | 27.52 | 20.55 |
| KRH24780 | Soybean | cytosol | 24.77 | 20.45 |
| KRH23094 | Soybean | cytosol | 20.73 | 20.43 |
| KRH24778 | Soybean | nucleus | 25.32 | 20.41 |
| KRH23095 | Soybean | cytosol | 24.4 | 20.24 |
| KRH24773 | Soybean | nucleus | 25.14 | 19.94 |
| KRH49113 | Soybean | cytosol | 26.79 | 19.89 |
| KRG99969 | Soybean | cytosol | 26.61 | 19.67 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 26.79 | 19.65 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 24.77 | 19.62 |
| KRH29779 | Soybean | cytosol | 25.69 | 18.87 |
Protein Annotations
| EntrezGene:100817120 | MapMan:15.5.12 | EMBL:ACUP02001288 | EnsemblPlantsGene:GLYMA_02G297700 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1JJH1 | InterPro:IPR005202 | EnsemblPlants:KRH73868 |
| ProteinID:KRH73868 | ProteinID:KRH73868.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF57 |
| InterPro:TF_GRAS | UniParc:UPI000233756C | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:47517245..47520623
Molecular Weight (calculated)
61472.2 Da
IEP (calculated)
5.374
GRAVY (calculated)
-0.288
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMSQKHKMS YDSSRFTSEP VQNLGSCCFL QSGNLDYYSS SDNSSHATYP SVCTFEQYCT LESSTNNNLP SLNSSSTVSF SPNNSPVSKL QSKSNVLSSQ
101: NSLELVNDSL ENESCLTLNN DELRHKIREL ESALLGHDTY ILDTYDTIIP EESDSFMLEA ERWKRMMEMI SRGDLKEMLC TCAKTVAVND METTEWLMSE
201: LRKMVSVSGD PIQRLGAYML EALVARLASS GSTIYKVLKC KEPTGSELLS HMHLLYEICP YLKFGYMSAN GAIAEAMKEE SEVHIIDFQI NQGIQWVSLI
301: QALAGRPGGP PKIRITGFDD STSAYAREGG LEIVGARLST LAQSYNVPFE FHAIRASPTE VELKDLALQP GEAIAVNFAM MLHHVPDESV DSGNHRDRLV
401: RLAKCLSPKI VTLVEQESHT NNLPFFPRFV ETMNYYLAIF ESIDVALPRE HKERINVEQH CLAREVVNLI ACEGEERVER HELLKKWRSR FTMAGFAPYP
501: LNSFITCSIK NLQRSYRGHY TLEERDGALC LGWMNQVLIT SCAWR
101: NSLELVNDSL ENESCLTLNN DELRHKIREL ESALLGHDTY ILDTYDTIIP EESDSFMLEA ERWKRMMEMI SRGDLKEMLC TCAKTVAVND METTEWLMSE
201: LRKMVSVSGD PIQRLGAYML EALVARLASS GSTIYKVLKC KEPTGSELLS HMHLLYEICP YLKFGYMSAN GAIAEAMKEE SEVHIIDFQI NQGIQWVSLI
301: QALAGRPGGP PKIRITGFDD STSAYAREGG LEIVGARLST LAQSYNVPFE FHAIRASPTE VELKDLALQP GEAIAVNFAM MLHHVPDESV DSGNHRDRLV
401: RLAKCLSPKI VTLVEQESHT NNLPFFPRFV ETMNYYLAIF ESIDVALPRE HKERINVEQH CLAREVVNLI ACEGEERVER HELLKKWRSR FTMAGFAPYP
501: LNSFITCSIK NLQRSYRGHY TLEERDGALC LGWMNQVLIT SCAWR
001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.