Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028312.1-P | Field mustard | cytosol | 99.33 | 97.58 |
| CDY27821 | Canola | cytosol | 97.09 | 97.52 |
| CDX91655 | Canola | cytosol | 81.17 | 61.56 |
| CDY27063 | Canola | cytosol, plastid | 78.7 | 60.94 |
| AT5G52510.1 | Thale cress | nucleus | 82.51 | 57.5 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 56.95 | 43.12 |
| Solyc06g036170.1.1 | Tomato | nucleus | 53.36 | 39.8 |
| PGSC0003DMT400076932 | Potato | nucleus | 53.81 | 39.6 |
| KRG91573 | Soybean | plastid | 52.69 | 39.56 |
| Solyc03g025170.1.1 | Tomato | nucleus | 55.61 | 39.3 |
| KRH35251 | Soybean | plastid | 51.79 | 39.15 |
| KRH08880 | Soybean | plastid | 55.38 | 37.6 |
| PGSC0003DMT400026240 | Potato | nucleus, plastid | 54.48 | 37.16 |
| KRH38397 | Soybean | plastid | 43.5 | 35.93 |
| GSMUA_AchrUn_... | Banana | plastid | 46.86 | 35.73 |
| GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 45.74 | 34.93 |
| GSMUA_Achr9P18770_001 | Banana | cytosol | 43.95 | 34.45 |
| GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 43.05 | 34.16 |
| GSMUA_Achr1P03650_001 | Banana | mitochondrion | 42.38 | 33.16 |
| CDY00883 | Canola | cytosol | 29.15 | 32.1 |
| CDX68389 | Canola | cytosol | 6.05 | 31.76 |
| GSMUA_Achr4P24960_001 | Banana | cytosol | 34.3 | 31.55 |
| CDY71156 | Canola | cytosol, plastid | 27.58 | 31.54 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 43.5 | 31.14 |
| Zm00001d002573_P001 | Maize | cytosol | 43.05 | 30.82 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 42.6 | 30.69 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 43.05 | 30.62 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 43.27 | 30.59 |
| Os02t0681900-01 | Rice | cytosol | 41.7 | 30.1 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 25.78 | 29.87 |
| Zm00001d051461_P001 | Maize | cytosol | 40.36 | 29.65 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 41.93 | 29.64 |
| CDY07309 | Canola | cytosol | 15.92 | 29.58 |
| CDY22807 | Canola | nucleus | 27.35 | 29.05 |
| CDY37124 | Canola | nucleus | 27.35 | 29.05 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 42.15 | 28.83 |
| EES05727 | Sorghum | cytosol | 40.58 | 28.78 |
| CDY61060 | Canola | cytosol | 34.53 | 28.57 |
| CDY19966 | Canola | cytosol | 31.61 | 28.54 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 31.61 | 28.37 |
| CDY05700 | Canola | cytosol, plastid | 31.39 | 28.17 |
| CDY71174 | Canola | cytosol, plastid | 31.39 | 28.17 |
| CDY00074 | Canola | cytosol, plastid | 31.39 | 28.17 |
| CDY00377 | Canola | cytosol | 34.53 | 28.0 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 31.17 | 27.97 |
| CDY50240 | Canola | cytosol | 35.2 | 27.26 |
| CDY68224 | Canola | cytosol | 34.53 | 26.74 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 18.61 | 26.18 |
| CDY58168 | Canola | plastid | 29.37 | 24.72 |
| CDY35589 | Canola | cytosol | 29.37 | 24.67 |
| CDY50128 | Canola | cytosol, plastid | 29.37 | 24.58 |
| CDY42968 | Canola | cytosol | 29.15 | 24.3 |
| CDY71578 | Canola | nucleus, plastid | 20.4 | 17.47 |
| CDY39530 | Canola | cytosol | 24.22 | 17.45 |
| CDY47877 | Canola | nucleus | 23.77 | 17.15 |
| CDX82987 | Canola | nucleus | 23.09 | 17.14 |
| CDY33040 | Canola | nucleus | 22.42 | 16.75 |
| CDY06266 | Canola | cytosol | 22.65 | 15.98 |
| CDX68388 | Canola | cytosol | 14.13 | 15.22 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 22.65 | 15.01 |
| CDX79750 | Canola | peroxisome | 22.65 | 14.99 |
| CDY06265 | Canola | cytosol | 22.42 | 14.49 |
| CDX86475 | Canola | nucleus | 22.65 | 14.23 |
| CDY47878 | Canola | nucleus | 21.75 | 14.04 |
| CDY09912 | Canola | cytosol | 21.97 | 14.0 |
| CDY15616 | Canola | nucleus | 21.97 | 13.71 |
| CDX77228 | Canola | cytosol | 20.63 | 13.69 |
| CDY31749 | Canola | cytosol | 21.97 | 13.5 |
| CDY09911 | Canola | nucleus | 15.92 | 12.16 |
Protein Annotations
| EnsemblPlants:CDY00533 | EnsemblPlantsGene:GSBRNA2T00110273001 | GO:A0A078EMG3 | InterPro:IPR005202 | InterPro:Scarecrow-like_8 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF130 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY00533 | ProteinID:CDY00533.1 |
| SEG:seg | UniParc:UPI0004EEDF15 | MapMan:15.5.12 | : | : | : |
Description
BnaA10g07400D
Coordinates
chrLK031919:+:1167451..1168815
Molecular Weight (calculated)
48405.3 Da
IEP (calculated)
5.126
GRAVY (calculated)
-0.231
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNSLRELEK QLLDDDDAQG GDDDVSVITH SNSNSDWLHG LVTPNPNPVL SSSPSSSSSS SSPSTASTTT SVCSRQTVLE IATAIAEGKT EIASEILARV
101: SQTPSQRRNS EEKLVDFMVT ALRSRINPAE SSAPATELYG KEHIVSTQLL YELSPCFKLG FMAANLAILD AAGNKNDDGT SFHVIDFEIG EGGQYVHLLH
201: ALSTRRSGKN PLVVRITAVT NISDGFSRLR TIGDRLSELS DGLGISLKFN VVAGLRLSDL SRESLGCHPD EPLAVNLAFK LYRVPDESVC MENPRDELLR
301: RVKGLNPSVV TLVEEEMNSN TAPFLGRVSE SCACYGALLD SVESTVPSSN SDRAKVEEGI GRKLINAVAC EGIDRIERCE MFGKWRMRMS MAGFELMPLS
401: EKIAESMKSR LSNGNRVHPG FTVKEENGGV CFGWMGRTLA VASAWR
101: SQTPSQRRNS EEKLVDFMVT ALRSRINPAE SSAPATELYG KEHIVSTQLL YELSPCFKLG FMAANLAILD AAGNKNDDGT SFHVIDFEIG EGGQYVHLLH
201: ALSTRRSGKN PLVVRITAVT NISDGFSRLR TIGDRLSELS DGLGISLKFN VVAGLRLSDL SRESLGCHPD EPLAVNLAFK LYRVPDESVC MENPRDELLR
301: RVKGLNPSVV TLVEEEMNSN TAPFLGRVSE SCACYGALLD SVESTVPSSN SDRAKVEEGI GRKLINAVAC EGIDRIERCE MFGKWRMRMS MAGFELMPLS
401: EKIAESMKSR LSNGNRVHPG FTVKEENGGV CFGWMGRTLA VASAWR
001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
Arabidopsis Description
SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.