Factsheet for Zm00001d051461_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05727	Sorghum	cytosol	84.84	81.88
Os02t0681900-01	Rice	cytosol	68.86	67.64
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	60.13	58.59
Zm00001d002573_P001	Maize	cytosol	60.13	58.59
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	45.8	47.6
GSMUA_AchrUn_...	Banana	plastid	45.8	47.52
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	43.0	46.44
GSMUA_Achr1P03650_001	Banana	mitochondrion	42.5	45.26
GSMUA_Achr9P18770_001	Banana	cytosol	41.35	44.11
GSMUA_Achr4P24960_001	Banana	cytosol	33.28	41.65
CDY27821	Canola	cytosol	29.98	40.99
CDY00533	Canola	cytosol	29.65	40.36
Bra028312.1-P	Field mustard	cytosol	29.82	39.87
CDY27063	Canola	cytosol, plastid	34.93	36.81
Bra022596.1-P	Field mustard	plastid	35.09	36.79
VIT_16s0050g00950.t01	Wine grape	cytosol, nucleus, plastid	35.26	36.33
CDX91655	Canola	cytosol	33.94	35.03
Solyc06g036170.1.1	Tomato	nucleus	33.94	34.45
PGSC0003DMT400076932	Potato	nucleus	34.27	34.32
Solyc03g025170.1.1	Tomato	nucleus	35.58	34.23
KRH35251	Soybean	plastid	33.11	34.07
KRG91573	Soybean	plastid	32.95	33.67
AT5G52510.1	Thale cress	nucleus	35.42	33.59
PGSC0003DMT400026240	Potato	nucleus, plastid	35.58	33.03
KRH38397	Soybean	plastid	27.51	30.93
KRH08880	Soybean	plastid	32.62	30.14
Zm00001d038225_P001	Maize	cytosol	27.35	29.59
Zm00001d006701_P001	Maize	cytosol	24.88	27.26
Zm00001d021946_P001	Maize	cytosol	25.04	27.24
Zm00001d048199_P001	Maize	mitochondrion, nucleus	23.89	27.05
Zm00001d030500_P001	Maize	nucleus	22.57	25.28
Zm00001d030744_P001	Maize	cytosol	18.29	22.56
Zm00001d006551_P001	Maize	golgi, mitochondrion	22.41	22.04
Zm00001d048681_P001	Maize	cytosol	19.93	21.27
Zm00001d048601_P001	Maize	cytosol	21.25	20.09
Zm00001d007713_P001	Maize	cytosol	19.6	19.87
Zm00001d007248_P001	Maize	cytosol, endoplasmic reticulum, nucleus	17.13	19.22
Zm00001d003553_P001	Maize	cytosol	18.95	18.95
Zm00001d048602_P001	Maize	cytosol	20.43	18.62
Zm00001d034664_P001	Maize	plastid	17.13	18.6
Zm00001d035671_P001	Maize	cytosol	18.95	18.37
Zm00001d048588_P001	Maize	cytosol	19.11	18.3
Zm00001d048682_P001	Maize	nucleus	18.45	17.81
Zm00001d011070_P001	Maize	cytosol	18.12	17.54
Zm00001d041536_P001	Maize	cytosol	19.77	16.9
Zm00001d048600_P001	Maize	nucleus	17.96	16.9
Zm00001d048604_P001	Maize	cytosol	21.25	16.86
Zm00001d028603_P001	Maize	cytosol	18.62	15.4
Zm00001d033166_P001	Maize	nucleus	18.12	15.03
Zm00001d042907_P001	Maize	cytosol	19.11	14.34
Zm00001d047813_P002	Maize	nucleus	18.62	13.63
Zm00001d035670_P001	Maize	cytosol	15.82	13.22
Zm00001d048603_P001	Maize	cytosol	20.76	8.85

Protein Annotations

EntrezGene:100281548	MapMan:15.5.12	ProteinID:AIB04512.1	ProteinID:AQK54282.1	UniProt:B6SWF9	EMBL:EU957074
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR005202	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF4
InterPro:TF_GRAS	UniParc:UPI000182C2AB	EnsemblPlantsGene:Zm00001d051461	EnsemblPlants:Zm00001d051461_P001	EnsemblPlants:Zm00001d051461_T001	SEG:seg

Description

GRAS-transcription factor 76Chitin-inducible gibberellin-responsive protein 2

Coordinates

chr4:-:159541879..159543702

Molecular Weight (calculated)

63035.5 Da

IEP (calculated)

8.503

GRAVY (calculated)

-0.109

Length

607 amino acids

Sequence
(BLAST)

001: MEPAGAPWCD PGRGYGAGSA AEAPTLKGQQ PQQLLLTPPR QDGAALKRSL GDVERWQQAL YLRAVRQRVA VAAQSQMAHP PTDVGPVLAG ATASPASYGF
101: SRPPSSPFAG LSPQPSSTLS SLTTASHVET PPLLQRHTVA ARELVLLQEL EKHLLDDGDG EAEATGSACG STVTSSAWGD TIQELNSLTA APLASLPNNY
201: SNTVPAMSRS PPSNSSSSTA SSAASSSPAA STTASSRQLL SEAAAAVADG NHAAAAAHLA VLKTAANPRG DAEQRLVAMM AGALSSRIRR PPASHQHLAG
301: LCGAEQRAEW QLLQHVSPCF GLALHGANLA ILDAVADQRA IHLIDFDVSV AQHTALIDSL ASRRVAGTCL KVTAVTDPTS PFTPALAQAL AATGQRLKEH
401: ARQAGVEFRF RAVSCVAGEV EASRSRLGCD ETGEALVVNL AFALSRVPDE SVSPANPRDA LLRGVRGLRP RVVTLVEQEL GANTAPLAAR FADACAHYGA
501: VLESLDATLG RDSAQRARAE AALASKAANA VAREGPDRVE RCEVFGKWRA RFGMAGLRPV AIGQGVADRV KGRLGPAARP GFDVKLDSGR LAIGWMGRVV
601: TVASAWR

Best Arabidopsis Sequence Match ( AT5G52510.1 )
(BLAST)

001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR

Arabidopsis Description

SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.