Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG26392 | Sorghum | cytosol | 83.36 | 79.81 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 47.28 | 49.14 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 47.78 | 49.07 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 51.57 | 49.06 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 48.43 | 48.68 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 51.57 | 46.93 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 49.42 | 46.66 |
| Zm00001d030744_P001 | Maize | cytosol | 37.73 | 46.54 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 50.91 | 45.78 |
| Zm00001d048600_P001 | Maize | nucleus | 48.6 | 45.74 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 47.12 | 44.27 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 46.79 | 44.17 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 51.07 | 43.85 |
| Zm00001d048601_P001 | Maize | cytosol | 45.96 | 43.46 |
| Zm00001d048588_P001 | Maize | cytosol | 42.83 | 41.01 |
| Zm00001d048602_P001 | Maize | cytosol | 43.66 | 39.79 |
| Zm00001d041536_P001 | Maize | cytosol | 45.96 | 39.3 |
| Zm00001d048604_P001 | Maize | cytosol | 49.09 | 38.95 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.17 | 38.08 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 33.61 | 37.71 |
| Zm00001d048681_P001 | Maize | cytosol | 35.09 | 37.43 |
| Zm00001d048682_P001 | Maize | nucleus | 37.73 | 36.41 |
| Zm00001d007713_P001 | Maize | cytosol | 35.75 | 36.23 |
| Zm00001d034664_P001 | Maize | plastid | 32.29 | 35.06 |
| Zm00001d035671_P001 | Maize | cytosol | 33.44 | 32.43 |
| Zm00001d028603_P001 | Maize | cytosol | 38.72 | 32.02 |
| Zm00001d011070_P001 | Maize | cytosol | 32.13 | 31.1 |
| Zm00001d042907_P001 | Maize | cytosol | 38.39 | 28.8 |
| Zm00001d047813_P002 | Maize | nucleus | 38.06 | 27.86 |
| Zm00001d035670_P001 | Maize | cytosol | 33.28 | 27.82 |
| Zm00001d033166_P001 | Maize | nucleus | 33.11 | 27.46 |
| Zm00001d021946_P001 | Maize | cytosol | 22.08 | 24.01 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 21.09 | 23.88 |
| Zm00001d006701_P001 | Maize | cytosol | 21.75 | 23.83 |
| Zm00001d030500_P001 | Maize | nucleus | 21.25 | 23.8 |
| Zm00001d038225_P001 | Maize | cytosol | 19.77 | 21.39 |
| Zm00001d048603_P001 | Maize | cytosol | 49.26 | 21.01 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 20.43 | 20.1 |
| Zm00001d051461_P001 | Maize | cytosol | 18.95 | 18.95 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 17.63 | 17.18 |
| Zm00001d002573_P001 | Maize | cytosol | 16.97 | 16.53 |
Protein Annotations
| EnsemblPlants:Zm00001d003553_P001 | EnsemblPlants:Zm00001d003553_T001 | EnsemblPlantsGene:Zm00001d003553 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:ONM17148.1 | SEG:seg |
| UniParc:UPI000220EFD4 | UniProt:A0A1D6E9S7 | MapMan:15.5.12 | : | : | : |
Description
GRAS-transcription factor 51
Coordinates
chr2:+:47859916..47861739
Molecular Weight (calculated)
66682.2 Da
IEP (calculated)
6.467
GRAVY (calculated)
-0.287
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPTAAQPRS FSNLSPTPDL DGSQDDNVLP FISRMLMEDD GVDEFLYQQY PDHNPALLQT QQLFAQVLSD TSTNALTALQ AVAHGSDLQD PSSLNSTATG
101: AVEPASILLP AEGSSCCKDA VSMAFFRGME EANKFLPGDG GGGYTVDCRG RKKRLDGDDE GEGRSSKQMA ADGEESEESA AREMLDRLML NGDDEPMLAD
201: IQELRAAMDM AKTLPGRPGG RAHGVDLHSM LLHCADALAS NNRHSAADLL ARIRRHSSLC GDATQRLAHW FAEGLELRLN GTGSLHYRSS SLMAKSASCA
301: GAPLKAQQFF MASCCFLPVS ILFANKTIYN AAAGRKKLHI VHYGLEHGLQ WASLLRWLAH REGGPPEVRL TGIDVPQPGF RPARLIEEAG RRVHACARRL
401: GVPFRFRGIA SRPEAVRAGD LGIDPDEVLV ICSMFHFRTL ADESTDDPIG VVLGAIREMR PAVFVHAVLN ASYSTAFFAT RFRELLYNFT ALFDMMDAIL
501: PRDNGRRLLF EREVLARCAV NAIACEGAGR AHHTRSYKQW QARSRRAGLR QLPLDGDVVR TLRDKVSREY HEGFVITEDQ QWLLQGWKGR VLYAISTWTA
601: DDGLAGN
101: AVEPASILLP AEGSSCCKDA VSMAFFRGME EANKFLPGDG GGGYTVDCRG RKKRLDGDDE GEGRSSKQMA ADGEESEESA AREMLDRLML NGDDEPMLAD
201: IQELRAAMDM AKTLPGRPGG RAHGVDLHSM LLHCADALAS NNRHSAADLL ARIRRHSSLC GDATQRLAHW FAEGLELRLN GTGSLHYRSS SLMAKSASCA
301: GAPLKAQQFF MASCCFLPVS ILFANKTIYN AAAGRKKLHI VHYGLEHGLQ WASLLRWLAH REGGPPEVRL TGIDVPQPGF RPARLIEEAG RRVHACARRL
401: GVPFRFRGIA SRPEAVRAGD LGIDPDEVLV ICSMFHFRTL ADESTDDPIG VVLGAIREMR PAVFVHAVLN ASYSTAFFAT RFRELLYNFT ALFDMMDAIL
501: PRDNGRRLLF EREVLARCAV NAIACEGAGR AHHTRSYKQW QARSRRAGLR QLPLDGDVVR TLRDKVSREY HEGFVITEDQ QWLLQGWKGR VLYAISTWTA
601: DDGLAGN
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.