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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G336200.1 Wheat cytosol 81.34 89.55
TraesCS5A01G506000.1 Wheat cytosol 80.87 86.09
TraesCS4A01G176700.1 Wheat cytosol 79.78 76.91
TraesCS4A01G177100.1 Wheat nucleus 61.74 61.74
TraesCS4A01G176400.1 Wheat cytosol 39.97 51.61
TraesCS5A01G505900.1 Wheat cytosol 32.5 51.6
OQU84120 Sorghum nucleus 50.7 51.42
KXG26392 Sorghum cytosol 48.99 49.68
Zm00001d003553_P001 Maize cytosol 46.66 49.42
Zm00001d048600_P001 Maize nucleus 48.06 47.91
KXG29232 Sorghum cytosol 50.23 47.5
TraesCS4A01G176300.1 Wheat cytosol 47.9 45.63
TraesCS4A01G176600.1 Wheat cytosol 45.88 45.45
TraesCS4A01G176500.1 Wheat cytosol 32.81 42.37
TraesCS7A01G173000.1 Wheat cytosol 47.28 40.64
GSMUA_Achr5P08320_001 Banana cytosol 28.3 40.53
TraesCS5A01G080300.1 Wheat cytosol 46.5 40.19
TraesCS4A01G176200.1 Wheat peroxisome 48.68 39.03
TraesCS5A01G481300.1 Wheat cytosol 36.24 35.57
TraesCS5A01G139000.1 Wheat cytosol, plastid 40.44 33.51
TraesCS3A01G360300.1 Wheat cytosol, extracellular, nucleus 38.88 31.65
TraesCS5A01G414000.1 Wheat cytosol 19.6 29.58
TraesCS1A01G030200.1 Wheat cytosol 32.35 28.85
TraesCS1A01G030300.1 Wheat cytosol 31.26 28.47
TraesCS3A01G067900.1 Wheat cytosol 31.1 27.7
TraesCS5A01G409800.1 Wheat nucleus, plastid 21.15 27.15
TraesCS3A01G068000.1 Wheat nucleus 29.7 26.68
TraesCS2A01G189600.1 Wheat cytosol 21.46 24.91
TraesCS4A01G039000.1 Wheat nucleus 17.26 22.7
TraesCS2A01G214400.1 Wheat cytosol 19.91 22.46
TraesCS3A01G408000.1 Wheat cytosol 18.51 21.56
TraesCS2A01G395400.1 Wheat cytosol, mitochondrion, nucleus 17.57 17.91
Protein Annotations
EnsemblPlants:TraesCS5A01G506100.1EnsemblPlantsGene:TraesCS5A01G506100InterPro:IPR005202InterPro:TF_GRASncoils:CoilPANTHER:PTHR31636
PANTHER:PTHR31636:SF27PFAM:PF03514PFscan:PS50985SEG:segMapMan:15.5.12:
Description
No Description!
Coordinates
chr5A:+:671183493..671185701
Molecular Weight (calculated)
72298.2 Da
IEP (calculated)
5.431
GRAVY (calculated)
-0.309
Length
643 amino acids
Sequence
(BLAST)
001: MAATPEELLG LAEPAPLSPS LFLDLPPMTH GDSQNDLALE YISRVLTEED IVDKFFYQYP DHPKLLQAEQ SFAEILANTS PTADQESFAD STSILMPSQG
101: NNTDVMVSGC QVQDPALLNC TGTVEPNSMV FPSESSTNMN MLSSMSMAFF NGMEDANRFL PADDVMMDGR GRKKRSDMDG EMEAGLGRSS KQIVVVLHSA
201: LEEEEEEEEE ATALEMLDRL ILNGYEASPS EMQEVVRVTW EDKEDKAARQ SISRRGRCAA RHTVVTDLET LLTRCAEAVA SSDVCGASKL LERIKCHSSP
301: RGDARQRLAH YFAQGLEARL AGTGSRLYRS LMGKRTSAVE LIRAYHLHTA ASCSIKVGLL FSTNTIYKAV AWRRKLHIVH YGISTGFQWP DLLGLLANRE
401: GGPPEVRITG INSPQPGPCP AALMEEAGHR LNNYASQFGV PFKFRAIASK LEDVRAEDLH IDPDEVLVVS SLYEFRTLMD ESLTSDMLSP RDMVLNTISK
501: MRPSVFVSSV VNGPYSAAFF MTRFRHALYY FSALFDMMET TVPWVAKRLL VERDIFARSA INRIACEGTD RVERPQNYKE WQTRNQRAGL RQLPLDPDIV
601: LILKDEVKNR YHKHFMICED HRWLLQGWKG RVLYAHSTWE LSW
Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.