Factsheet for TraesCS1A01G030300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G030800.1	Wheat	cytosol	89.38	90.01
TraesCS1B01G037400.1	Wheat	cytosol	87.11	85.06
TraesCS1A01G030200.1	Wheat	cytosol	77.34	75.73
Zm00001d035670_P001	Maize	cytosol	53.68	52.2
EES18880	Sorghum	cytosol	53.97	51.42
Solyc04g011630.1.1	Tomato	cytosol	12.32	51.18
EES18882	Sorghum	cytosol	52.69	50.75
CDX68389	Canola	cytosol	5.67	47.06
VIT_06s0004g04990.t01	Wine grape	cytosol	28.33	45.25
GSMUA_Achr8P02550_001	Banana	nucleus	23.94	43.11
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.7	41.64
CDX80265	Canola	endoplasmic reticulum, golgi	18.56	41.32
TraesCS5A01G505900.1	Wheat	cytosol	23.65	41.23
PGSC0003DMT400005480	Potato	cytosol	27.9	40.45
GSMUA_Achr6P34090_001	Banana	nucleus	33.99	39.22
TraesCS4A01G176400.1	Wheat	cytosol	27.2	38.55
KRH10240	Soybean	cytosol	32.58	37.95
TraesCS3A01G068000.1	Wheat	nucleus	38.39	37.85
PGSC0003DMT400049420	Potato	cytosol	35.41	37.65
KRH24780	Soybean	cytosol	34.56	36.97
VIT_06s0004g04970.t01	Wine grape	cytosol	34.42	36.93
TraesCS3A01G067900.1	Wheat	cytosol	37.68	36.84
KRH23095	Soybean	cytosol	34.28	36.83
VIT_13s0019g01780.t01	Wine grape	nucleus	31.16	36.67
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	32.58	36.51
TraesCS5A01G481300.1	Wheat	cytosol	33.71	36.34
KRH49113	Soybean	cytosol	37.68	36.24
PGSC0003DMT400016258	Potato	cytosol	37.25	36.13
KRG99969	Soybean	cytosol	37.68	36.09
CDY71578	Canola	nucleus, plastid	26.63	36.08
CDY47877	Canola	nucleus	31.59	36.08
Bra028391.1-P	Field mustard	nucleus	31.44	35.81
KRH23094	Soybean	cytosol	28.05	35.8
KRH29771	Soybean	cytosol	34.42	35.74
VIT_13s0019g01810.t01	Wine grape	cytosol	37.82	35.7
KRH29773	Soybean	cytosol	31.02	35.67
Solyc05g053090.1.1	Tomato	cytosol	37.54	35.67
KRH65839	Soybean	cytosol, plastid	36.83	35.62
Bra033813.1-P	Field mustard	nucleus	29.32	35.57
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	35.69	35.54
CDY39530	Canola	cytosol	31.02	35.38
VIT_13s0019g01710.t01	Wine grape	cytosol	36.26	35.21
PGSC0003DMT400069949	Potato	cytosol	37.11	35.07
TraesCS5A01G139000.1	Wheat	cytosol, plastid	38.53	35.05
Solyc09g010920.1.1	Tomato	cytosol	37.68	34.95
KRH29774	Soybean	cytosol	31.16	34.87
CDX82987	Canola	nucleus	29.6	34.78
KRH10243	Soybean	nucleus	32.72	34.74
PGSC0003DMT400022997	Potato	cytosol, plastid	37.39	34.69
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	31.59	34.52
AT3G46600.1	Thale cress	cytosol	28.47	34.48
VIT_13s0019g01790.t01	Wine grape	cytosol	34.84	34.21
KRH23089	Soybean	cytosol	31.16	34.16
CDX79750	Canola	peroxisome	32.58	34.12
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	32.44	34.03
CDY07777	Canola	cytosol, nucleus, peroxisome	32.44	34.03
KRH24775	Soybean	cytosol	32.72	33.97
VIT_06s0004g04950.t01	Wine grape	cytosol	36.26	33.95
VIT_06s0004g04980.t01	Wine grape	nucleus	33.85	33.95
Bra015584.1-P	Field mustard	cytosol	20.96	33.95
KRH24773	Soybean	nucleus	33.0	33.92
VIT_13s0019g01700.t01	Wine grape	cytosol	36.4	33.82
Solyc10g086530.1.1	Tomato	cytosol	36.4	33.77
Solyc01g100200.2.1	Tomato	nucleus	31.73	33.63
KRH29779	Soybean	cytosol	35.27	33.56
Solyc06g082530.1.1	Tomato	cytosol	31.02	33.54
GSMUA_AchrUn_...	Banana	cytosol	31.3	33.54
CDY33040	Canola	nucleus	28.33	33.5
CDY47878	Canola	nucleus	32.44	33.14
KRH29775	Soybean	nucleus	31.59	33.14
CDX86475	Canola	nucleus	33.14	32.96
AT2G29060.1	Thale cress	cytosol	32.29	32.85
TraesCS4A01G176600.1	Wheat	cytosol	30.17	32.82
TraesCS4A01G176500.1	Wheat	cytosol	23.09	32.73
KRH24778	Soybean	nucleus	31.3	32.69
KRH23090	Soybean	vacuole	28.75	32.69
AT5G59450.1	Thale cress	nucleus	28.19	32.62
Bra028390.1-P	Field mustard	cytosol	32.58	32.58
PGSC0003DMT400078286	Potato	nucleus	30.74	32.53
TraesCS3A01G360300.1	Wheat	cytosol, extracellular, nucleus	36.4	32.53
PGSC0003DMT400077972	Potato	cytosol	34.56	32.45
Solyc06g076280.1.1	Tomato	cytosol	34.28	32.35
Bra030688.1-P	Field mustard	nucleus	33.85	32.17
KRH10241	Soybean	cytosol, nucleus, peroxisome	31.3	32.12
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.71	32.03
CDX77228	Canola	cytosol	30.45	31.99
CDY15616	Canola	nucleus	32.29	31.89
CDY06266	Canola	cytosol	28.47	31.8
AT2G37650.1	Thale cress	cytosol	32.01	31.48
TraesCS5A01G506000.1	Wheat	cytosol	26.77	31.29
TraesCS5A01G506100.1	Wheat	cytosol	28.47	31.26
CDX68388	Canola	cytosol	18.27	31.16
TraesCS4A01G176300.1	Wheat	cytosol	29.75	31.11
CDY31749	Canola	cytosol	31.87	30.99
AT1G07520.3	Thale cress	cytosol	30.45	30.89
Bra035653.1-P	Field mustard	cytosol	31.59	30.89
AT1G07530.1	Thale cress	cytosol	33.43	30.69
TraesCS4A01G177100.1	Wheat	nucleus	27.62	30.33
Bra031580.1-P	Field mustard	cytosol	29.6	30.29
CDY06265	Canola	cytosol	29.6	30.29
Bra031581.1-P	Field mustard	cytosol	28.61	30.24
VIT_06s0004g04960.t01	Wine grape	nucleus	34.14	30.24
TraesCS5A01G080300.1	Wheat	cytosol	31.73	30.11
TraesCS7A01G173000.1	Wheat	cytosol	31.87	30.08
CDY09912	Canola	cytosol	29.46	29.71
TraesCS4A01G176700.1	Wheat	cytosol	28.05	29.69
TraesCS4A01G176200.1	Wheat	peroxisome	32.15	28.3
TraesCS5A01G414000.1	Wheat	cytosol	16.86	27.93
CDY09911	Canola	nucleus	22.1	26.71
TraesCS5A01G409800.1	Wheat	nucleus, plastid	17.42	24.55
TraesCS2A01G189600.1	Wheat	cytosol	18.41	23.47
TraesCS2A01G214400.1	Wheat	cytosol	17.99	22.28
TraesCS4A01G039000.1	Wheat	nucleus	15.3	22.09
TraesCS3A01G408000.1	Wheat	cytosol	16.57	21.2
TraesCS2A01G395400.1	Wheat	cytosol, mitochondrion, nucleus	15.44	17.27

Protein Annotations

EnsemblPlants:TraesCS1A01G030300.1	EnsemblPlantsGene:TraesCS1A01G030300	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14
PFAM:PF03514	PFscan:PS50985	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr1A:-:14075238..14077358

Molecular Weight (calculated)

80158.5 Da

IEP (calculated)

8.324

GRAVY (calculated)

-0.447

Length

706 amino acids

Sequence
(BLAST)

001: MAIEPLRDNL DGIAVTDQPY DGDSSSQQQL TVHNYDLSGP HSTVLSPANQ VSVNSSHGQN KFQIAAGGSL ERHRIRSNNA LHYISQMLME DVDEGVGICQ
101: GAALQAAEKP FRDILGEGYA PPTNWPPLHS KNIPDNPDKS GTNRYKRLWN TSFSNDYSSY NVLQPLATPL SPYICNRSPF IPNQSSISVG LTSGSGLPAL
201: HGQRGVREER MFAPSIDKLV IYSKNNILYI SQLTTKEKVR ERTENTIFEV ADPRGWAIFQ GRNNEHHAIT TCAIIRNESF DQVVLCYGHS DRITRLQERM
301: AGEGNKTSLK GQSRSRKQPR KELVDLRTLL THCAQAVAED SYLLASELLL KIRQHSSADA DCTQRLAFYL ADGLKARLAR IGSQVYRNLV ERRTSTADWL
401: EAYSLFLPAF PFGRALYYFA TQAILDVSQG KPRVHIVDFG IGFGFQWPLM IQRLAQQEEG APKLRITGID VPQPGFYPCE MIEETRKRLA DYTNRFKVPF
501: QYQGIAASRW ETIKIEDLNI DEDEVLIVNC MFRMKNLGHE TDAVNGARDK VLKTMRRMNP KIFISGTVNG LLSSPFFIQR FKEVMLHYSS LFDMLDANVP
601: RDNEARKMVE RILFGQDALN IIACEGAERT QRPEIYRQWQ ARCLKAGFQQ LPVDQAILKN IVHRKNLHYH EEFFAVEDCG WLLQGWKGRV LYAISKWKPN
701: ETYGDQ

Best Arabidopsis Sequence Match ( AT2G29060.1 )
(BLAST)

001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL

Arabidopsis Description

SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.