Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031581.1-P | Field mustard | cytosol | 97.31 | 92.07 |
| CDY09911 | Canola | nucleus | 72.31 | 78.25 |
| CDY06265 | Canola | cytosol | 83.07 | 76.09 |
| CDY09912 | Canola | cytosol | 82.44 | 74.43 |
| AT1G07520.3 | Thale cress | cytosol | 77.06 | 69.97 |
| CDY47877 | Canola | nucleus | 59.97 | 61.33 |
| CDY39530 | Canola | cytosol | 59.97 | 61.23 |
| CDX68389 | Canola | cytosol | 6.96 | 51.76 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 23.26 | 46.37 |
| PGSC0003DMT400005480 | Potato | cytosol | 35.13 | 45.59 |
| KRH29773 | Soybean | cytosol | 43.04 | 44.3 |
| KRH29774 | Soybean | cytosol | 43.04 | 43.11 |
| CDY71578 | Canola | nucleus, plastid | 35.13 | 42.61 |
| KRH24778 | Soybean | nucleus | 45.09 | 42.16 |
| KRH29775 | Soybean | nucleus | 44.15 | 41.46 |
| KRH24775 | Soybean | cytosol | 43.51 | 40.44 |
| GSMUA_Achr10P... | Banana | nucleus | 28.01 | 40.05 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 28.8 | 39.91 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 46.52 | 39.57 |
| CDX86475 | Canola | nucleus | 44.3 | 39.44 |
| Solyc06g076280.1.1 | Tomato | cytosol | 46.52 | 39.3 |
| PGSC0003DMT400077972 | Potato | cytosol | 46.2 | 38.83 |
| CDY15616 | Canola | nucleus | 42.88 | 37.9 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 41.14 | 37.79 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 37.97 | 37.74 |
| CDY47878 | Canola | nucleus | 40.82 | 37.34 |
| Zm00001d034664_P001 | Maize | plastid | 32.91 | 37.21 |
| GSMUA_Achr10P... | Banana | cytosol | 35.13 | 37.06 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 24.05 | 36.8 |
| CDX82987 | Canola | nucleus | 34.34 | 36.11 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 36.55 | 35.87 |
| CDY33040 | Canola | nucleus | 33.54 | 35.51 |
| KXG21080 | Sorghum | cytosol | 35.13 | 35.46 |
| CDY31749 | Canola | cytosol | 40.35 | 35.12 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 33.23 | 35.12 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 36.39 | 35.01 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 36.23 | 34.96 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 36.23 | 34.86 |
| CDX77228 | Canola | cytosol | 37.03 | 34.82 |
| KXG38103 | Sorghum | cytosol | 34.34 | 34.66 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 33.54 | 34.64 |
| Zm00001d011070_P001 | Maize | cytosol | 34.18 | 34.45 |
| KXG37250 | Sorghum | cytosol | 35.13 | 34.1 |
| Os03t0690600-03 | Rice | cytosol | 39.24 | 33.93 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 31.8 | 33.72 |
| KXG21079 | Sorghum | cytosol | 33.23 | 33.71 |
| Zm00001d028603_P001 | Maize | cytosol | 39.08 | 33.65 |
| OQU92829 | Sorghum | cytosol | 38.92 | 33.52 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 20.73 | 33.42 |
| Zm00001d035671_P001 | Maize | cytosol | 33.07 | 33.39 |
| CDX79750 | Canola | peroxisome | 35.44 | 33.23 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 35.28 | 33.14 |
| CDX68388 | Canola | cytosol | 21.68 | 33.09 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 38.29 | 31.19 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 34.02 | 31.16 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 38.13 | 31.14 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 38.13 | 31.06 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 38.61 | 31.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.17 | 29.89 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 33.86 | 29.89 |
| Zm00001d047813_P002 | Maize | nucleus | 39.08 | 29.79 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 33.7 | 29.79 |
| EER91260 | Sorghum | nucleus | 33.7 | 29.54 |
| OQU91407 | Sorghum | nucleus | 31.96 | 29.45 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 33.54 | 29.36 |
| KXG38064 | Sorghum | nucleus | 33.39 | 29.31 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 32.28 | 29.1 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 33.07 | 28.99 |
| CDY07309 | Canola | cytosol | 10.92 | 28.75 |
| Zm00001d033166_P001 | Maize | nucleus | 33.23 | 28.69 |
| OQU91406 | Sorghum | nucleus | 33.7 | 28.48 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 32.12 | 28.47 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 31.8 | 28.47 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 32.75 | 28.43 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 30.38 | 28.4 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 32.44 | 28.39 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 31.49 | 28.27 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 32.28 | 28.22 |
| Zm00001d035670_P001 | Maize | cytosol | 31.96 | 27.82 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 31.65 | 27.82 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 31.65 | 27.74 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 31.49 | 27.45 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 31.49 | 27.3 |
| CDY00883 | Canola | cytosol | 17.41 | 27.16 |
| EES18882 | Sorghum | cytosol | 31.33 | 27.01 |
| CDY22807 | Canola | nucleus | 17.72 | 26.67 |
| EES18880 | Sorghum | cytosol | 31.17 | 26.59 |
| CDY37124 | Canola | nucleus | 17.56 | 26.43 |
| CDY71156 | Canola | cytosol, plastid | 16.3 | 26.41 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 30.54 | 25.5 |
| CDY58168 | Canola | plastid | 20.73 | 24.72 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 19.3 | 24.55 |
| CDY50128 | Canola | cytosol, plastid | 20.57 | 24.39 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 19.15 | 24.35 |
| CDY71174 | Canola | cytosol, plastid | 19.15 | 24.35 |
| CDY19966 | Canola | cytosol | 18.99 | 24.29 |
| CDY00074 | Canola | cytosol, plastid | 18.99 | 24.14 |
| CDY05700 | Canola | cytosol, plastid | 18.99 | 24.14 |
| CDY42968 | Canola | cytosol | 20.41 | 24.11 |
| CDY35589 | Canola | cytosol | 19.94 | 23.73 |
| CDY27821 | Canola | cytosol | 16.3 | 23.2 |
| CDY61060 | Canola | cytosol | 19.78 | 23.19 |
| CDY00533 | Canola | cytosol | 15.98 | 22.65 |
| CDY00377 | Canola | cytosol | 19.46 | 22.36 |
| CDY50240 | Canola | cytosol | 19.78 | 21.7 |
| CDY68224 | Canola | cytosol | 19.78 | 21.7 |
| CDY27063 | Canola | cytosol, plastid | 17.41 | 19.1 |
| CDX91655 | Canola | cytosol | 17.41 | 18.71 |
Protein Annotations
| EnsemblPlants:CDY06266 | EnsemblPlantsGene:GSBRNA2T00122184001 | GO:A0A078EYP1 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF129 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY06266 | ProteinID:CDY06266.1 | SEG:seg |
| UniParc:UPI0004EDD7AA | MapMan:15.5.12 | : | : | : | : |
Description
BnaA09g49370D
Coordinates
chrLK031968:-:539540..541540
Molecular Weight (calculated)
72702.7 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.567
Length
632 amino acids
Sequence
(BLAST)
(BLAST)
001: MMESNLYGMV NGYEYYDVSY LPNQTPNLGF GVPSSSDFDL RLDRIQIQPS IWVPSTQQHQ DQDSPPGADE IDSENTLLKY VNQLLMEEET LAENQTLSYD
101: SLALRQTEEM LQQVITDSQT QSPYISTSSS NSSGSGGEYL NSYSDSYSVN QFKRGVEEAS KFLPNTDQWI FNQDEKVYTS RVRKHHHQRG EEEEHEEARM
201: SKQSASNVDD GKLTEMFDKV LLLDNQLDPQ INDNVSSKAP ASKKERVQAV DFRTLLILCA QSISSGDMIT SVDLLRQIRN QSSPLGDASQ RLAHFFANAL
301: EARLQGSSGG VIQSYYDAVT SKKRTAAQIL KSYKTFLSAS PFMTLMYLYS NKMILDVAKD ASVLHVIDFG ILYGFQWPMF IQRISESKNG PRKLRITGVE
401: LPQNGFRPTE KLEDTGRRLR EYCKRFGVPF EYNAIASKNW ETIRLEEFKI RPNEVLAVNA VLRFKNLRDV TPGEEDCPRE GFLKLIRDMK PDVVLNSTVN
501: GSFNASFFTT RFKEALFHYT AVFDMFGSTL SRENPERMHF EEVFYGREVM NVIACEGVDR VERPETYKQW QVRMMRAGFK QKPVETELVE SFREKMKRWG
601: YHKDFVLDED SNWFLQGWKG RILYSSSCWV LS
101: SLALRQTEEM LQQVITDSQT QSPYISTSSS NSSGSGGEYL NSYSDSYSVN QFKRGVEEAS KFLPNTDQWI FNQDEKVYTS RVRKHHHQRG EEEEHEEARM
201: SKQSASNVDD GKLTEMFDKV LLLDNQLDPQ INDNVSSKAP ASKKERVQAV DFRTLLILCA QSISSGDMIT SVDLLRQIRN QSSPLGDASQ RLAHFFANAL
301: EARLQGSSGG VIQSYYDAVT SKKRTAAQIL KSYKTFLSAS PFMTLMYLYS NKMILDVAKD ASVLHVIDFG ILYGFQWPMF IQRISESKNG PRKLRITGVE
401: LPQNGFRPTE KLEDTGRRLR EYCKRFGVPF EYNAIASKNW ETIRLEEFKI RPNEVLAVNA VLRFKNLRDV TPGEEDCPRE GFLKLIRDMK PDVVLNSTVN
501: GSFNASFFTT RFKEALFHYT AVFDMFGSTL SRENPERMHF EEVFYGREVM NVIACEGVDR VERPETYKQW QVRMMRAGFK QKPVETELVE SFREKMKRWG
601: YHKDFVLDED SNWFLQGWKG RILYSSSCWV LS
001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.