Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71578 | Canola | nucleus, plastid | 73.08 | 96.93 |
| Bra028390.1-P | Field mustard | cytosol | 98.84 | 96.74 |
| AT2G29060.1 | Thale cress | cytosol | 76.85 | 76.51 |
| CDX77228 | Canola | cytosol | 68.74 | 70.68 |
| CDY31749 | Canola | cytosol | 74.24 | 70.66 |
| CDX86475 | Canola | nucleus | 65.99 | 64.23 |
| CDY15616 | Canola | nucleus | 65.27 | 63.08 |
| KRH24780 | Soybean | cytosol | 49.64 | 51.97 |
| GSMUA_Achr10P... | Banana | nucleus | 30.68 | 47.96 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 21.85 | 47.63 |
| KRH29779 | Soybean | cytosol | 51.09 | 47.57 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 51.09 | 46.82 |
| CDX68389 | Canola | cytosol | 5.64 | 45.88 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.77 | 44.79 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 25.18 | 44.39 |
| CDY47877 | Canola | nucleus | 38.93 | 43.53 |
| GSMUA_Achr10P... | Banana | cytosol | 37.63 | 43.41 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 28.51 | 43.2 |
| KRH23089 | Soybean | cytosol | 40.23 | 43.17 |
| KRH10243 | Soybean | nucleus | 41.53 | 43.16 |
| CDY39530 | Canola | cytosol | 38.64 | 43.13 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 49.2 | 42.66 |
| KRH23090 | Soybean | vacuole | 38.06 | 42.35 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 36.03 | 41.64 |
| CDY06266 | Canola | cytosol | 37.34 | 40.82 |
| Zm00001d034664_P001 | Maize | plastid | 32.56 | 40.25 |
| KXG38103 | Sorghum | cytosol | 36.18 | 39.94 |
| OQU92829 | Sorghum | cytosol | 42.4 | 39.92 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 35.31 | 39.87 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 36.32 | 39.47 |
| Os03t0690600-03 | Rice | cytosol | 41.68 | 39.4 |
| Zm00001d028603_P001 | Maize | cytosol | 41.82 | 39.37 |
| CDX79750 | Canola | peroxisome | 38.35 | 39.32 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 38.21 | 39.23 |
| KXG21079 | Sorghum | cytosol | 35.31 | 39.17 |
| Zm00001d011070_P001 | Maize | cytosol | 35.31 | 38.92 |
| KXG21080 | Sorghum | cytosol | 35.02 | 38.66 |
| CDY33040 | Canola | nucleus | 33.14 | 38.36 |
| CDY06265 | Canola | cytosol | 38.21 | 38.26 |
| CDX82987 | Canola | nucleus | 33.14 | 38.1 |
| Zm00001d035671_P001 | Maize | cytosol | 34.15 | 37.7 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 34.59 | 37.11 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 35.17 | 36.99 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 35.17 | 36.99 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 35.02 | 36.95 |
| KXG37250 | Sorghum | cytosol | 34.73 | 36.87 |
| CDY09912 | Canola | cytosol | 37.34 | 36.86 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 31.4 | 36.41 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 40.52 | 36.18 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 40.52 | 36.08 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 40.38 | 35.95 |
| CDY09911 | Canola | nucleus | 30.25 | 35.79 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 40.38 | 35.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.72 | 35.36 |
| Zm00001d047813_P002 | Maize | nucleus | 41.53 | 34.62 |
| CDX68388 | Canola | cytosol | 20.55 | 34.3 |
| CDY07309 | Canola | cytosol | 11.87 | 34.17 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 34.3 | 33.66 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 32.85 | 32.9 |
| EER91260 | Sorghum | nucleus | 34.3 | 32.87 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 34.3 | 32.87 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 34.3 | 32.83 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 34.15 | 32.55 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 34.01 | 32.55 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 33.57 | 32.54 |
| KXG38064 | Sorghum | nucleus | 33.86 | 32.5 |
| EES18882 | Sorghum | cytosol | 34.44 | 32.47 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 33.14 | 32.44 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 33.72 | 32.41 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 31.69 | 32.4 |
| Zm00001d035670_P001 | Maize | cytosol | 34.01 | 32.37 |
| OQU91407 | Sorghum | nucleus | 32.13 | 32.36 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 33.29 | 32.12 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 32.56 | 32.1 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 32.71 | 31.61 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 32.85 | 31.4 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 33.0 | 31.32 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 33.0 | 31.28 |
| OQU91406 | Sorghum | nucleus | 33.72 | 31.15 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 32.27 | 30.93 |
| EES18880 | Sorghum | cytosol | 33.14 | 30.9 |
| Zm00001d033166_P001 | Maize | nucleus | 32.56 | 30.74 |
| CDY71156 | Canola | cytosol, plastid | 16.64 | 29.49 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 32.27 | 29.46 |
| CDY00883 | Canola | cytosol | 17.22 | 29.38 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 20.55 | 28.57 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 20.55 | 28.57 |
| CDY19966 | Canola | cytosol | 19.83 | 27.73 |
| CDY00074 | Canola | cytosol, plastid | 19.68 | 27.36 |
| CDY05700 | Canola | cytosol, plastid | 19.68 | 27.36 |
| CDY71174 | Canola | cytosol, plastid | 19.68 | 27.36 |
| CDY22807 | Canola | nucleus | 16.5 | 27.14 |
| CDY37124 | Canola | nucleus | 16.5 | 27.14 |
| CDY42968 | Canola | cytosol | 20.98 | 27.1 |
| CDY35589 | Canola | cytosol | 20.69 | 26.93 |
| CDY58168 | Canola | plastid | 20.12 | 26.23 |
| CDY50128 | Canola | cytosol, plastid | 19.83 | 25.7 |
| CDY61060 | Canola | cytosol | 17.8 | 22.82 |
| CDY00377 | Canola | cytosol | 17.95 | 22.55 |
| CDY27821 | Canola | cytosol | 14.33 | 22.3 |
| CDY68224 | Canola | cytosol | 18.38 | 22.05 |
| CDY50240 | Canola | cytosol | 18.23 | 21.88 |
| CDY00533 | Canola | cytosol | 14.04 | 21.75 |
| CDY27063 | Canola | cytosol, plastid | 15.92 | 19.1 |
| CDX91655 | Canola | cytosol | 15.63 | 18.37 |
Protein Annotations
| EnsemblPlants:CDY47878 | EnsemblPlantsGene:GSBRNA2T00088384001 | GO:A0A078IFB4 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF132 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY47878 | ProteinID:CDY47878.1 |
| SEG:seg | UniParc:UPI0004EE1EF7 | UniProt:A0A078IFB4 | MapMan:15.5.12 | : | : |
Description
BnaA07g14230DBnaA07g14230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFB4]
Coordinates
chrLK032743:-:33015..35129
Molecular Weight (calculated)
78373.5 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.521
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSYSAGFPG SFDNFDFNYD DVFYLDDQAL LEIPSPFPPP PPAPPHPDPY SHAADAESDF SDSVLKYISQ VLMEEDMEEK PCMFHDALSL QAAEKSLYEA
101: LGQKYPDHSE RLAHSPDGSS PGYASSTTSS DWSFDCLENS RRPSWLHSPI PNNFVFKSTR SNPKPSGGSN VALKSSFNND LVSNMFNDSE LAFQFNRGKE
201: EASKFLPKSS QLVIDHHSVL PYRSTGKKKH WREDEHLLSE ERSKKQSAVY VDEAELSEMF DKVLLFGRPK EQPLCILNDN FIKETAKDSS SSYKSDATQQ
301: KHAASGNSYM KETPDLRTLL VSCAQAVSSN DRKMAEDLLR QVRQHSSSHG DGTERLAHYL ADSLEARLAG TGTQIYTALS SKKTSASDML KAYQTYISVC
401: PFKKTAIIFA NHSIMHLAPT DAKTIHIIDF GISYGFQWPP LIHRLAWRRG GSCKLRITGI ELPQRGFRPA EGVNETGERL ARYCQRYNVP FEYNGIAQKW
501: ETIKLEDLKL REGEFVAVNS LFRFRNLLDE TVAVHSPRDA VLKLIKKIKP NVFIPAVLSG SYNAPFFVTR FREVLFHYSS LFDMCDTSLP RGDPMRVMFE
601: KEFYGREIMN VVACEGSERV ERPESYKQWQ ARAMRAGFRQ LTLEKELVQK LKLMVESGYR SKEFDVDQDG NWLLQGWKGR IVYASCTLVP M
101: LGQKYPDHSE RLAHSPDGSS PGYASSTTSS DWSFDCLENS RRPSWLHSPI PNNFVFKSTR SNPKPSGGSN VALKSSFNND LVSNMFNDSE LAFQFNRGKE
201: EASKFLPKSS QLVIDHHSVL PYRSTGKKKH WREDEHLLSE ERSKKQSAVY VDEAELSEMF DKVLLFGRPK EQPLCILNDN FIKETAKDSS SSYKSDATQQ
301: KHAASGNSYM KETPDLRTLL VSCAQAVSSN DRKMAEDLLR QVRQHSSSHG DGTERLAHYL ADSLEARLAG TGTQIYTALS SKKTSASDML KAYQTYISVC
401: PFKKTAIIFA NHSIMHLAPT DAKTIHIIDF GISYGFQWPP LIHRLAWRRG GSCKLRITGI ELPQRGFRPA EGVNETGERL ARYCQRYNVP FEYNGIAQKW
501: ETIKLEDLKL REGEFVAVNS LFRFRNLLDE TVAVHSPRDA VLKLIKKIKP NVFIPAVLSG SYNAPFFVTR FREVLFHYSS LFDMCDTSLP RGDPMRVMFE
601: KEFYGREIMN VVACEGSERV ERPESYKQWQ ARAMRAGFRQ LTLEKELVQK LKLMVESGYR SKEFDVDQDG NWLLQGWKGR IVYASCTLVP M
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.