Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06265 | Canola | cytosol | 94.86 | 96.23 |
| CDY06266 | Canola | cytosol | 74.43 | 82.44 |
| AT1G07520.3 | Thale cress | cytosol | 77.57 | 78.02 |
| CDY09911 | Canola | nucleus | 59.29 | 71.06 |
| CDY47877 | Canola | nucleus | 56.0 | 63.43 |
| CDY39530 | Canola | cytosol | 55.86 | 63.17 |
| CDX68389 | Canola | cytosol | 6.43 | 52.94 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 22.0 | 48.58 |
| KRH29773 | Soybean | cytosol | 40.43 | 46.09 |
| PGSC0003DMT400005480 | Potato | cytosol | 31.71 | 45.59 |
| KRH29774 | Soybean | cytosol | 40.0 | 44.37 |
| KRH24778 | Soybean | nucleus | 41.43 | 42.9 |
| KRH29775 | Soybean | nucleus | 41.0 | 42.64 |
| CDY71578 | Canola | nucleus, plastid | 31.57 | 42.42 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 44.29 | 41.72 |
| KRH24775 | Soybean | cytosol | 40.29 | 41.47 |
| GSMUA_Achr10P... | Banana | nucleus | 25.86 | 40.95 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 39.71 | 40.41 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 26.14 | 40.13 |
| Solyc06g076280.1.1 | Tomato | cytosol | 42.57 | 39.84 |
| CDX86475 | Canola | nucleus | 40.14 | 39.58 |
| PGSC0003DMT400077972 | Potato | cytosol | 42.29 | 39.36 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 34.86 | 38.36 |
| CDY15616 | Canola | nucleus | 38.86 | 38.04 |
| GSMUA_Achr10P... | Banana | cytosol | 32.43 | 37.9 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 22.14 | 37.53 |
| Zm00001d034664_P001 | Maize | plastid | 29.86 | 37.39 |
| CDY47878 | Canola | nucleus | 36.86 | 37.34 |
| CDX82987 | Canola | nucleus | 31.71 | 36.94 |
| CDY33040 | Canola | nucleus | 31.43 | 36.85 |
| KXG21080 | Sorghum | cytosol | 32.71 | 36.58 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 33.29 | 36.18 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 31.57 | 36.11 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 33.57 | 35.88 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 30.43 | 35.62 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 33.43 | 35.62 |
| Zm00001d011070_P001 | Maize | cytosol | 31.86 | 35.57 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 33.29 | 35.46 |
| KXG38103 | Sorghum | cytosol | 31.71 | 35.46 |
| CDX79750 | Canola | peroxisome | 33.43 | 34.72 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 33.29 | 34.62 |
| Zm00001d028603_P001 | Maize | cytosol | 36.29 | 34.6 |
| CDY31749 | Canola | cytosol | 35.86 | 34.57 |
| Os03t0690600-03 | Rice | cytosol | 36.0 | 34.47 |
| OQU92829 | Sorghum | cytosol | 36.14 | 34.47 |
| KXG37250 | Sorghum | cytosol | 31.86 | 34.26 |
| KXG21079 | Sorghum | cytosol | 30.43 | 34.19 |
| CDX77228 | Canola | cytosol | 32.71 | 34.08 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 28.71 | 33.72 |
| Zm00001d035671_P001 | Maize | cytosol | 30.14 | 33.71 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 18.86 | 33.67 |
| CDX68388 | Canola | cytosol | 19.29 | 32.61 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 35.43 | 31.96 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 35.43 | 31.96 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 35.29 | 31.91 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 35.43 | 31.51 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 30.71 | 31.16 |
| Zm00001d047813_P002 | Maize | nucleus | 36.43 | 30.76 |
| OQU91407 | Sorghum | nucleus | 29.43 | 30.03 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 30.57 | 29.93 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 30.43 | 29.75 |
| EER91260 | Sorghum | nucleus | 30.57 | 29.68 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 29.71 | 29.67 |
| KXG38064 | Sorghum | nucleus | 30.43 | 29.58 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 29.71 | 29.46 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.71 | 29.44 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 30.29 | 29.36 |
| Zm00001d035670_P001 | Maize | cytosol | 30.43 | 29.34 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 29.86 | 29.31 |
| OQU91406 | Sorghum | nucleus | 31.29 | 29.28 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 30.0 | 29.13 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 29.86 | 29.07 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 29.14 | 28.98 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 29.86 | 28.91 |
| Zm00001d033166_P001 | Maize | nucleus | 30.14 | 28.83 |
| EES18882 | Sorghum | cytosol | 30.14 | 28.79 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 29.29 | 28.43 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 27.43 | 28.4 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 29.29 | 28.39 |
| CDY07309 | Canola | cytosol | 9.71 | 28.33 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 29.43 | 28.3 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 29.14 | 28.14 |
| EES18880 | Sorghum | cytosol | 29.57 | 27.94 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 29.0 | 27.85 |
| CDY00883 | Canola | cytosol | 15.43 | 26.67 |
| CDY37124 | Canola | nucleus | 16.0 | 26.67 |
| CDY71156 | Canola | cytosol, plastid | 14.71 | 26.41 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 28.43 | 26.29 |
| CDY22807 | Canola | nucleus | 15.71 | 26.19 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 17.43 | 24.55 |
| CDY19966 | Canola | cytosol | 17.29 | 24.49 |
| CDY00074 | Canola | cytosol, plastid | 17.29 | 24.35 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 17.29 | 24.35 |
| CDY71174 | Canola | cytosol, plastid | 17.29 | 24.35 |
| CDY05700 | Canola | cytosol, plastid | 17.14 | 24.14 |
| CDY42968 | Canola | cytosol | 18.0 | 23.55 |
| CDY35589 | Canola | cytosol | 17.71 | 23.35 |
| CDY58168 | Canola | plastid | 17.57 | 23.21 |
| CDY50128 | Canola | cytosol, plastid | 17.57 | 23.08 |
| CDY61060 | Canola | cytosol | 17.71 | 23.01 |
| CDY27821 | Canola | cytosol | 14.29 | 22.52 |
| CDY00377 | Canola | cytosol | 17.43 | 22.18 |
| CDY00533 | Canola | cytosol | 14.0 | 21.97 |
| CDY50240 | Canola | cytosol | 17.86 | 21.7 |
| CDY68224 | Canola | cytosol | 17.86 | 21.7 |
| CDY27063 | Canola | cytosol, plastid | 15.29 | 18.58 |
| CDX91655 | Canola | cytosol | 15.29 | 18.2 |
Protein Annotations
| EnsemblPlants:CDY09912 | EnsemblPlantsGene:GSBRNA2T00031675001 | GO:A0A078FA29 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF129 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY09912 | ProteinID:CDY09912.1 |
| SEG:seg | UniParc:UPI0004EF24A5 | UniProt:A0A078FA29 | MapMan:15.5.12 | : | : |
Description
BnaC08g45390DBnaC08g45390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA29]
Coordinates
chrLK032000:+:44321..46423
Molecular Weight (calculated)
80217.3 Da
IEP (calculated)
6.227
GRAVY (calculated)
-0.611
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MMESNFYRIV NGHKYYDVSF LPNQIPDLGF GVPSSSDFDL RLDHHHQQQP SYWIPSTQQD QDQYSPPAAA DEIDSENTLL KYVNQLLMEE ETLSENQSLS
101: SYDSLALRQT EEMLQQVIND SLAQSSNSIT SSTSSGSSSG EYLNSNSNSC VRIETEANST ESEALSDDHP HHVFDSGVVS FQGPNMSRGY GQPANEILVR
201: SIFSDADSVN QFKRGLEEAS KFLPNTDQWI FNPQHEVIPV KDEKGFSRVR KHHHQEPEEE EARRRKQSAV NVDDGNITEL FDKVLLLDNQ LDPQIKEETE
301: NVSSKKEGGR GKKKSKAVDF RTLLTLCAQS ISSGDKLAAD DLLNQIKKQC SPLGDASQRL AYFFTKALEA RLQGSSGVKI QSYYDSITSK KRTAAQILKT
401: YKAFLSASPF MTLIYFFSNK MILDASKDAS VLHIIDFGIL YGFQWPMFIQ YISKSKIGPR KLRITGVELP QNGFRPTEKI EDTGRRLREY CKRFGVPFEY
501: HALASKNWET IRLEEFKIRP NEVLAVNSVL RFKNLRDVTP GEEDCPRDGF LKLIRDMKPD AFLSSTINGS FNAPFFATRF KEALFHYSSL FDMFGSTLSK
601: ENPERMHFEG EFFGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVERELVESF REKMKRWGYH KDFVLDEDNN WFLQGWKGRI LFSSSCWVPS
101: SYDSLALRQT EEMLQQVIND SLAQSSNSIT SSTSSGSSSG EYLNSNSNSC VRIETEANST ESEALSDDHP HHVFDSGVVS FQGPNMSRGY GQPANEILVR
201: SIFSDADSVN QFKRGLEEAS KFLPNTDQWI FNPQHEVIPV KDEKGFSRVR KHHHQEPEEE EARRRKQSAV NVDDGNITEL FDKVLLLDNQ LDPQIKEETE
301: NVSSKKEGGR GKKKSKAVDF RTLLTLCAQS ISSGDKLAAD DLLNQIKKQC SPLGDASQRL AYFFTKALEA RLQGSSGVKI QSYYDSITSK KRTAAQILKT
401: YKAFLSASPF MTLIYFFSNK MILDASKDAS VLHIIDFGIL YGFQWPMFIQ YISKSKIGPR KLRITGVELP QNGFRPTEKI EDTGRRLREY CKRFGVPFEY
501: HALASKNWET IRLEEFKIRP NEVLAVNSVL RFKNLRDVTP GEEDCPRDGF LKLIRDMKPD AFLSSTINGS FNAPFFATRF KEALFHYSSL FDMFGSTLSK
601: ENPERMHFEG EFFGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVERELVESF REKMKRWGYH KDFVLDEDNN WFLQGWKGRI LFSSSCWVPS
001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.