CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035670_P001	Maize	cytosol	83.36	84.16
EES18880	Sorghum	cytosol	83.36	82.46
TraesCS1B01G037500.1	Wheat	cytosol	33.29	59.08
Solyc04g011630.1.1	Tomato	cytosol	13.1	56.47
TraesCS1B01G037300.1	Wheat	cytosol	51.98	54.12
TraesCS1D01G030800.1	Wheat	cytosol	51.16	53.49
TraesCS1D01G031200.1	Wheat	cytosol	52.93	53.22
TraesCS1D01G031000.1	Wheat	cytosol	52.52	53.1
CDX68389	Canola	cytosol	6.14	52.94
HORVU1Hr1G004440.1	Barley	cytosol	51.71	52.71
TraesCS1A01G030300.1	Wheat	cytosol	50.75	52.69
TraesCS1A01G030200.1	Wheat	cytosol	51.16	52.01
TraesCS1D01G030900.1	Wheat	cytosol	50.48	51.89
TraesCS1B01G037400.1	Wheat	cytosol	50.48	51.18
TraesCS1B01G037200.1	Wheat	nucleus	49.52	47.95
KXG38103	Sorghum	cytosol	40.65	47.6
KXG21080	Sorghum	cytosol	40.52	47.44
KXG21079	Sorghum	cytosol	40.11	47.19
VIT_06s0004g04990.t01	Wine grape	cytosol	28.38	47.06
GSMUA_Achr8P02550_001	Banana	nucleus	24.28	45.41
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	19.1	44.16
CDX80265	Canola	endoplasmic reticulum, golgi	18.83	43.53
PGSC0003DMT400005480	Potato	cytosol	26.88	40.45
OQU91407	Sorghum	nucleus	37.65	40.23
EER91260	Sorghum	nucleus	39.56	40.22
GSMUA_Achr6P34090_001	Banana	nucleus	33.42	40.03
PGSC0003DMT400049420	Potato	cytosol	35.74	39.46
OQU92829	Sorghum	cytosol	39.29	39.24
KXG38064	Sorghum	nucleus	38.06	38.75
KRH29773	Soybean	cytosol	32.2	38.44
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.56	37.8
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	34.65	37.74
CDY07777	Canola	cytosol, nucleus, peroxisome	34.65	37.74
VIT_13s0019g01780.t01	Wine grape	nucleus	30.83	37.67
CDX79750	Canola	peroxisome	34.52	37.54
KRH10240	Soybean	cytosol	30.7	37.13
KXG37250	Sorghum	cytosol	32.88	37.02
KRH65839	Soybean	cytosol, plastid	36.83	36.99
CDY71578	Canola	nucleus, plastid	26.06	36.66
KRG99969	Soybean	cytosol	36.83	36.63
PGSC0003DMT400016258	Potato	cytosol	36.29	36.54
KRH23094	Soybean	cytosol	27.56	36.53
Bra015584.1-P	Field mustard	cytosol	21.69	36.47
KRH49113	Soybean	cytosol	36.43	36.38
Bra033813.1-P	Field mustard	nucleus	28.79	36.25
OQU91406	Sorghum	nucleus	36.97	36.23
KRH24780	Soybean	cytosol	32.61	36.21
KRH29774	Soybean	cytosol	30.97	35.97
AT3G46600.1	Thale cress	cytosol	28.51	35.85
PGSC0003DMT400022997	Potato	cytosol, plastid	36.97	35.61
Solyc09g010920.1.1	Tomato	cytosol	36.97	35.61
Solyc10g086530.1.1	Tomato	cytosol	36.97	35.61
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	30.56	35.56
AT2G37650.1	Thale cress	cytosol	34.79	35.52
KRH29775	Soybean	nucleus	32.61	35.51
CDY33040	Canola	nucleus	28.92	35.51
KRH24778	Soybean	nucleus	32.74	35.5
CDX86475	Canola	nucleus	34.38	35.49
VIT_13s0019g01790.t01	Wine grape	cytosol	34.79	35.47
KRH23095	Soybean	cytosol	31.79	35.46
KRH24775	Soybean	cytosol	32.88	35.44
VIT_13s0019g01710.t01	Wine grape	cytosol	35.06	35.35
CDX82987	Canola	nucleus	28.79	35.11
VIT_06s0004g04970.t01	Wine grape	cytosol	31.51	35.11
KRH24773	Soybean	nucleus	32.88	35.08
CDY47877	Canola	nucleus	29.47	34.95
KRH29771	Soybean	cytosol	32.33	34.85
Bra028391.1-P	Field mustard	nucleus	29.47	34.84
VIT_06s0004g04980.t01	Wine grape	nucleus	33.42	34.8
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.56	34.67
CDY39530	Canola	cytosol	29.2	34.57
OQU84115	Sorghum	cytosol	22.92	34.5
VIT_13s0019g01810.t01	Wine grape	cytosol	35.2	34.49
GSMUA_AchrUn_...	Banana	cytosol	30.97	34.45
CDY47878	Canola	nucleus	32.47	34.44
AT2G29060.1	Thale cress	cytosol	32.61	34.44
PGSC0003DMT400069949	Potato	cytosol	35.06	34.4
AT5G59450.1	Thale cress	nucleus	28.51	34.26
Bra030688.1-P	Field mustard	nucleus	34.65	34.19
Solyc05g053090.1.1	Tomato	cytosol	34.65	34.19
EES01740	Sorghum	cytosol	37.52	34.08
OQU83981	Sorghum	cytosol	23.06	34.0
Bra028390.1-P	Field mustard	cytosol	32.61	33.85
VIT_06s0004g04950.t01	Wine grape	cytosol	34.79	33.82
VIT_13s0019g01700.t01	Wine grape	cytosol	35.06	33.82
CDY15616	Canola	nucleus	32.74	33.57
Solyc06g082530.1.1	Tomato	cytosol	29.88	33.54
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.97	33.51
Solyc01g100200.2.1	Tomato	nucleus	30.42	33.48
KRH23089	Soybean	cytosol	29.33	33.39
KRH10243	Soybean	nucleus	30.29	33.38
Solyc06g076280.1.1	Tomato	cytosol	33.97	33.29
PGSC0003DMT400078286	Potato	nucleus	30.29	33.28
EES16206	Sorghum	cytosol	32.88	33.01
PGSC0003DMT400077972	Potato	cytosol	33.83	32.98
KRH10241	Soybean	cytosol, nucleus, peroxisome	30.83	32.85
OQU84113	Sorghum	cytosol, nucleus, plastid	28.51	32.71
OQU84116	Sorghum	nucleus	27.56	32.63
KXG29219	Sorghum	cytosol	30.56	32.51
KXG29228	Sorghum	cytosol	27.42	32.47
EES09053	Sorghum	cytosol	28.24	32.34
AT1G07530.1	Thale cress	cytosol	33.83	32.25
KRH29779	Soybean	cytosol	32.61	32.21
CDX77228	Canola	cytosol	29.47	32.14
Bra035653.1-P	Field mustard	cytosol	31.24	31.72
KXG26392	Sorghum	cytosol	27.42	31.7
OQU84120	Sorghum	nucleus	27.42	31.7
CDY31749	Canola	cytosol	31.24	31.54
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	27.15	31.34
CDY06266	Canola	cytosol	27.01	31.33
OQU83979	Sorghum	plastid	25.92	31.3
OQU84105	Sorghum	cytosol	31.11	31.23
AT1G07520.3	Thale cress	cytosol	29.6	31.18
OQU84111	Sorghum	cytosol	28.65	31.16
KRH23090	Soybean	vacuole	26.33	31.08
Bra031580.1-P	Field mustard	cytosol	29.2	31.01
CDY06265	Canola	cytosol	29.2	31.01
OQU84112	Sorghum	cytosol	30.29	30.96
OQU83980	Sorghum	cytosol	25.65	30.27
CDX68388	Canola	cytosol	17.05	30.19
CDY09912	Canola	cytosol	28.79	30.14
VIT_06s0004g04960.t01	Wine grape	nucleus	32.74	30.11
Bra031581.1-P	Field mustard	cytosol	27.42	30.09
OQU90003	Sorghum	cytosol	31.65	30.05
OQU84114	Sorghum	mitochondrion	19.24	29.44
KXG29232	Sorghum	cytosol	27.29	29.41
KXG29223	Sorghum	cytosol	28.38	29.25
OQU83978	Sorghum	mitochondrion	25.1	29.07
KXG29224	Sorghum	nucleus	27.15	28.72
OQU81651	Sorghum	cytosol	27.01	28.29
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	30.83	28.07
KXG36217	Sorghum	cytosol	31.65	27.95
CDY09911	Canola	nucleus	21.56	27.05
EER97449	Sorghum	cytosol	19.51	26.14
EER95348	Sorghum	cytosol	17.19	23.51
EER97346	Sorghum	cytosol	16.64	21.4
KXG33821	Sorghum	cytosol	16.1	20.74
EES18257	Sorghum	cytosol	15.69	20.43
EES05727	Sorghum	cytosol	13.37	15.58
EES12703	Sorghum	cytosol, nucleus, plastid	13.37	15.03

Protein Annotations

MapMan:15.5.12	EntrezGene:8067319	UniProt:C5YYG8	EnsemblPlants:EES18882	ProteinID:EES18882	ProteinID:EES18882.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202
PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14	EnsemblPlantsGene:SORBI_3009G011300	InterPro:TF_GRAS
UniParc:UPI0001A88A07	RefSeq:XP_002440452.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:1023460..1027533

Molecular Weight (calculated)

83016.9 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.425

Length

733 amino acids

Sequence
(BLAST)

001: MRIESPFDDL YTITTPGQRQ DGFSTSSSQQ QLTLYDQRLC DPQFFSQLTN ESNMQFSGVV TIPGMYNVSS NLGQNHIQIP TGVSPDYQMV RPNNALHHIS
101: QILMEDIDDR VGSHEGEAAL QAAEKSFHGI LEQVYPLSLE WSPLHHSGEA GDGPGEGSNS YHKRPRRSSF TTDIFSNSML QSLQAPLSPY SYGRSSFQPY
201: QPLASTGRAS RFGFPALQIR REAKDAKGFD KMVIHLVGDK LSICRLTTAK AKEVAGKSKY AIFQISDPRN NPYIQDLDNR EGWGKNCTIT CEINHNDKLD
301: SVLLCYGPDC FNETARLRDM AAKEASKNSP KGESKSTAQQ KSRGTRQLKK EVVDLRSLLI HCAQAVAADD RLLASELIKK IRQHSSRDGE CCQRLAFYFV
401: NGLEARLAGT GSQLFPKMLA KRISEDDMLK VYNFYLAVCP FHRASYTFAN QTIIETSAGH SRVHIIDFGV YTGFQWPSLI QLFGDQGVPP RLRITGIEVP
501: RPGFSPLENI ERTGKLLADY ANMYKVPFQY QGIYSRYEDI QIEDLNIEED EVLIINCLYR MKNLGDETVA MDSARDRVLK IMRRMNPKVF IFGILNGSYS
601: SPFFVTRFKE LLFHYSSLFD MLDVNASRGN EARKLLEGGI LGREILNVIA CESADRIERP ETYQQWQARC LKVGFEQLPL DPAIMKSMLL MKKEFYHEDF
701: VADEDSGWLL QGWKGRVLYA LSKWKINESC ADQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.