CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048602_P001	Maize	cytosol	70.57	75.98
KXG29223	Sorghum	cytosol	57.18	57.67
KXG29219	Sorghum	cytosol	54.39	56.6
OQU84111	Sorghum	cytosol	49.93	53.12
KXG29224	Sorghum	nucleus	49.79	51.52
EES09053	Sorghum	cytosol	45.61	51.09
OQU84105	Sorghum	cytosol	51.05	50.14
OQU84113	Sorghum	cytosol, nucleus, plastid	43.93	49.3
OQU90003	Sorghum	cytosol	52.72	48.96
OQU84115	Sorghum	cytosol	32.22	47.43
KXG29228	Sorghum	cytosol	40.17	46.53
GSMUA_Achr5P08320_001	Banana	cytosol	28.87	46.1
EES16206	Sorghum	cytosol	46.44	45.62
OQU84120	Sorghum	nucleus	40.31	45.58
KXG36217	Sorghum	cytosol	51.88	44.82
KXG26392	Sorghum	cytosol	39.33	44.48
OQU84116	Sorghum	nucleus	38.21	44.26
OQU83981	Sorghum	cytosol	30.27	43.66
OQU84114	Sorghum	mitochondrion	29.15	43.63
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	48.95	43.6
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	38.08	42.99
OQU83979	Sorghum	plastid	35.84	42.34
OQU83980	Sorghum	cytosol	36.4	42.03
KXG29232	Sorghum	cytosol	39.47	41.62
OQU83978	Sorghum	mitochondrion	36.12	40.92
OQU81651	Sorghum	cytosol	38.21	39.14
KXG38103	Sorghum	cytosol	33.33	38.18
KXG37250	Sorghum	cytosol	33.75	37.17
OQU92829	Sorghum	cytosol	37.66	36.78
KXG21079	Sorghum	cytosol	31.66	36.44
EES01740	Sorghum	cytosol	39.75	35.32
KXG21080	Sorghum	cytosol	30.54	34.98
OQU91407	Sorghum	nucleus	30.96	32.36
EER91260	Sorghum	nucleus	31.52	31.35
KXG38064	Sorghum	nucleus	30.68	30.56
EES18882	Sorghum	cytosol	30.96	30.29
EES18880	Sorghum	cytosol	30.68	29.69
OQU91406	Sorghum	nucleus	30.54	29.28
EER97449	Sorghum	cytosol	19.11	25.05
EER95348	Sorghum	cytosol	18.69	25.0
EES18257	Sorghum	cytosol	17.99	22.91
EER97346	Sorghum	cytosol	18.13	22.81
KXG33821	Sorghum	cytosol	17.99	22.67
EES05727	Sorghum	cytosol	17.02	19.4
EES12703	Sorghum	cytosol, nucleus, plastid	15.2	16.72

Protein Annotations

EnsemblPlants:OQU84112	EnsemblPlantsGene:SORBI_3005G230200	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU84112	ProteinID:OQU84112.1	SEG:seg
UniParc:UPI000B424963	UniProt:A0A1Z5RK42	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71687476..71690143

Molecular Weight (calculated)

78870.4 Da

IEP (calculated)

5.908

GRAVY (calculated)

-0.353

Length

717 amino acids

Sequence
(BLAST)

001: MAAEPAELAD SQPFSPSDFL SLPPTPRLDL DCPALQLQLQ DDDDDLVLPF ISRMLMEEDM DGFFDPDHPA LLQAQQPFAD ILSDAAAAST TTKSSAGANS
101: NSNAGNSRGT TLSPASAAGS PAFANATWPY DPVDLSQLLL CRTYPDKLPA GNPAFANTDA LASSTMFGGG TVSMDMLNQA FLKGMEEASK FLPATTTNSL
201: LMPIVSGDGD HKKLWHVRQP KKTLVKPQVD GNGMPSSLLL QQSASNGSSR GRKNNRHAGW GGDDLEEDET TGRRSCKLLA CETEEIEMVD EFVQSGYQTL
301: HEQMVAMTLS TDVDDKKSAT SRKGKKGSAN EAVDLRTLLI HCAQAVAAGN RPSATDLLSK IRERSSPRGD ATQRLAHCFA KGLEARLAGT GSQVYGSSSL
401: MARGYSAVEL LRAYQLYLAA CCFTAMAFKF SNMAINKAIA GRKKVHIVDY GGHYGFQWPT LLGHWANNRE GGPPEVRITA IDLPQPGFRP AARIQETGRR
501: LTNFARRHGV PFRFHSIAAA KWETVSVDDL NIEHDEVLVV NGLFHFGKLM DEGADIDSLS PRDMVLGNIR KMRPDVFILC IENSSYNAPF FVTRFREAMF
601: FYSALFDMMD AVAPRDDDDE RVLVEQELFG RCALNAIACE GSDRVERPET YRQWQVRNER AGLRQLALDP DMVKGISKKV KDKYHKDFVI DVDQQWLLQG
701: WKGRILYAMS AWVANGR

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.