CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21079	Sorghum	cytosol	87.7	88.12
Zm00001d035671_P001	Maize	cytosol	87.54	87.54
KXG21080	Sorghum	cytosol	67.89	67.89
Solyc04g011630.1.1	Tomato	cytosol	15.81	58.24
CDX68389	Canola	cytosol	7.19	52.94
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	24.6	48.58
CDX80265	Canola	endoplasmic reticulum, golgi	24.28	47.95
VIT_06s0004g04990.t01	Wine grape	cytosol	33.71	47.74
GSMUA_Achr8P02550_001	Banana	nucleus	27.48	43.88
PGSC0003DMT400005480	Potato	cytosol	32.91	42.3
OQU92829	Sorghum	cytosol	49.36	42.1
VIT_13s0019g01780.t01	Wine grape	nucleus	39.14	40.83
PGSC0003DMT400049420	Potato	cytosol	43.29	40.81
KRH10240	Soybean	cytosol	39.46	40.76
EES18882	Sorghum	cytosol	47.6	40.65
OQU91407	Sorghum	nucleus	44.41	40.52
GSMUA_Achr6P34090_001	Banana	nucleus	39.46	40.36
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	45.21	39.92
KRH29774	Soybean	cytosol	39.62	39.3
KRH29773	Soybean	cytosol	38.5	39.25
KRH24780	Soybean	cytosol	41.37	39.24
CDY71578	Canola	nucleus, plastid	32.59	39.16
EES18880	Sorghum	cytosol	46.33	39.14
KRH23094	Soybean	cytosol	34.34	38.88
KRG99969	Soybean	cytosol	45.69	38.81
CDY47877	Canola	nucleus	38.18	38.67
EER91260	Sorghum	nucleus	44.41	38.56
KRH49113	Soybean	cytosol	45.21	38.56
Bra028391.1-P	Field mustard	nucleus	38.18	38.55
VIT_13s0019g01710.t01	Wine grape	cytosol	44.73	38.51
PGSC0003DMT400016258	Potato	cytosol	44.73	38.46
CDY39530	Canola	cytosol	38.02	38.45
Bra015584.1-P	Field mustard	cytosol	26.68	38.3
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	38.5	38.25
KRH65839	Soybean	cytosol, plastid	44.57	38.22
KXG37250	Sorghum	cytosol	39.62	38.1
KRH29771	Soybean	cytosol	41.37	38.09
VIT_06s0004g04970.t01	Wine grape	cytosol	39.94	37.99
KRH24775	Soybean	cytosol	41.21	37.94
KRH29775	Soybean	nucleus	40.73	37.89
VIT_13s0019g01810.t01	Wine grape	cytosol	45.21	37.83
KRH23095	Soybean	cytosol	39.62	37.75
PGSC0003DMT400069949	Potato	cytosol	44.89	37.62
OQU84115	Sorghum	cytosol	29.23	37.58
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	40.26	37.44
KXG38064	Sorghum	nucleus	42.97	37.36
CDY33040	Canola	nucleus	35.62	37.35
CDY07777	Canola	cytosol, nucleus, peroxisome	40.1	37.3
Solyc05g053090.1.1	Tomato	cytosol	44.25	37.28
CDX79750	Canola	peroxisome	40.1	37.24
AT3G46600.1	Thale cress	cytosol	34.66	37.22
AT5G59450.1	Thale cress	nucleus	36.26	37.21
VIT_06s0004g04980.t01	Wine grape	nucleus	41.69	37.07
VIT_13s0019g01790.t01	Wine grape	cytosol	42.49	37.0
CDX86475	Canola	nucleus	41.85	36.9
KRH24773	Soybean	nucleus	40.42	36.83
PGSC0003DMT400022997	Potato	cytosol, plastid	44.73	36.79
OQU91406	Sorghum	nucleus	43.77	36.63
Bra033813.1-P	Field mustard	nucleus	34.03	36.6
KRH24778	Soybean	nucleus	39.46	36.54
AT2G29060.1	Thale cress	cytosol	40.42	36.46
VIT_13s0019g01700.t01	Wine grape	cytosol	44.25	36.45
Solyc09g010920.1.1	Tomato	cytosol	44.09	36.27
Solyc10g086530.1.1	Tomato	cytosol	44.09	36.27
CDY47878	Canola	nucleus	39.94	36.18
GSMUA_AchrUn_...	Banana	cytosol	38.02	36.12
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	37.22	36.07
KRH23089	Soybean	cytosol	36.9	35.87
Bra028390.1-P	Field mustard	cytosol	40.42	35.84
OQU83981	Sorghum	cytosol	28.43	35.81
CDX82987	Canola	nucleus	34.34	35.77
VIT_06s0004g04950.t01	Wine grape	cytosol	42.97	35.68
EES09053	Sorghum	cytosol	36.42	35.62
EES01740	Sorghum	cytosol	45.85	35.56
KRH10243	Soybean	nucleus	37.7	35.49
Bra030688.1-P	Field mustard	nucleus	42.01	35.4
AT2G37650.1	Thale cress	cytosol	40.26	35.1
Solyc06g082530.1.1	Tomato	cytosol	36.58	35.07
Solyc06g076280.1.1	Tomato	cytosol	41.85	35.03
KXG29219	Sorghum	cytosol	38.5	34.98
PGSC0003DMT400077972	Potato	cytosol	42.01	34.97
KRH29779	Soybean	cytosol	41.37	34.91
OQU84113	Sorghum	cytosol, nucleus, plastid	35.62	34.9
OQU84120	Sorghum	nucleus	35.3	34.86
CDY15616	Canola	nucleus	39.78	34.83
Solyc01g100200.2.1	Tomato	nucleus	36.9	34.68
OQU84105	Sorghum	cytosol	40.42	34.66
Bra035653.1-P	Field mustard	cytosol	39.94	34.63
KXG29228	Sorghum	cytosol	34.19	34.57
OQU84111	Sorghum	cytosol	37.22	34.57
EES16206	Sorghum	cytosol	40.26	34.52
CDY31749	Canola	cytosol	39.94	34.44
CDY06266	Canola	cytosol	34.66	34.34
PGSC0003DMT400078286	Potato	nucleus	36.58	34.33
KRH23090	Soybean	vacuole	33.87	34.14
CDX77228	Canola	cytosol	36.58	34.08
AT1G07530.1	Thale cress	cytosol	41.85	34.07
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	39.94	33.65
OQU84116	Sorghum	nucleus	33.23	33.6
KRH10241	Soybean	cytosol, nucleus, peroxisome	36.74	33.43
OQU84112	Sorghum	cytosol	38.18	33.33
AT1G07520.3	Thale cress	cytosol	36.9	33.19
Bra031581.1-P	Field mustard	cytosol	34.82	32.63
CDY06265	Canola	cytosol	35.94	32.61
KXG26392	Sorghum	cytosol	32.91	32.49
Bra031580.1-P	Field mustard	cytosol	35.78	32.46
OQU90003	Sorghum	cytosol	39.46	31.99
OQU83979	Sorghum	plastid	30.99	31.96
CDX68388	Canola	cytosol	21.09	31.88
VIT_06s0004g04960.t01	Wine grape	nucleus	40.58	31.87
CDY09912	Canola	cytosol	35.46	31.71
KXG29223	Sorghum	cytosol	35.78	31.5
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	31.95	31.5
OQU83980	Sorghum	cytosol	31.15	31.4
KXG29232	Sorghum	cytosol	34.03	31.32
OQU83978	Sorghum	mitochondrion	31.63	31.28
KXG29224	Sorghum	nucleus	34.5	31.17
OQU84114	Sorghum	mitochondrion	23.48	30.69
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	39.46	30.68
OQU81651	Sorghum	cytosol	33.23	29.71
CDY09911	Canola	nucleus	27.16	29.11
KXG36217	Sorghum	cytosol	38.34	28.92
EER97449	Sorghum	cytosol	22.52	25.78
EER95348	Sorghum	cytosol	20.29	23.69
KXG33821	Sorghum	cytosol	21.09	23.2
EES18257	Sorghum	cytosol	20.45	22.74
EER97346	Sorghum	cytosol	20.45	22.46
EES05727	Sorghum	cytosol	17.57	17.49
EES12703	Sorghum	cytosol, nucleus, plastid	15.5	14.88

Protein Annotations

MapMan:15.5.12	UniProt:A0A1B6QJK6	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	EnsemblPlants:KXG38103	ProteinID:KXG38103
ProteinID:KXG38103.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF14	EnsemblPlantsGene:SORBI_3001G181100
InterPro:TF_GRAS	UniParc:UPI0003C714D6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:15364070..15368745

Molecular Weight (calculated)

71478.8 Da

IEP (calculated)

5.769

GRAVY (calculated)

-0.490

Length

626 amino acids

Sequence
(BLAST)

001: MGSLEYCEIN SNTTLDYINR LLMEEGTDEK ASIYQRHDAL QAMEKPFYDI LGQAYPSSPT EAMISRDNQV DCPQDNYSEQ TCSGSFFTEN LGPQGMHLVA
101: NDWASECDHL SLQFERGAEE ANKFVPIIVQ LVDLDSNGLP DSNQMTKATI GQKGKHVSKI QSHPHVDLEF LEARSSKHLA ISVSETTRDE MFDSVLLCDW
201: QFHCDAAHLR EIKAKEANNS SQNVWRKGYG QGQMKSQGKK KEEGIDLRDH LMQCAQAIVV NNLPFASELL KKIRRHASPY GDGSQRLALY FANGLEARLA
301: GTGSQMYQKL MEKRTRATDM LKAYRLFNAV CPFARVAYYF SNQTIADLLN GRPKVHIIDF GITLGFQWPS LIQRFAKQEG GPPKLRITGI DVPQPGFRPC
401: AIIEATGKRL AEYAEMFNVP FEYQGIASQW EDICIENLNI DNDEVLIVNC MYRTKYLGDE TEDIDSARDR VLRTMNRINP EVFILGIANG MYNNPFFLPR
501: FREVLFHYSA LFDMLDATAL RSDEDRVQIE RDLFGASALN VVACEGAERI ERPETYKQWQ VRCLKAGFKQ LPVDKAILKR SIDEKDKHYH EDFVIDEDSR
601: WLLQGWKGRI MHAVSSWKPK ESYTNQ

Best Arabidopsis Sequence Match ( AT2G37650.2 )
(BLAST)

001: MVNRNRLSGL PDQPSSHSFT PVTLYDGFNY NLSSDHINTV VAAPENSVFI REEEEEEDPA DDFDFSDAVL GYISQMLNEE DMDDKVCMLQ ESLDLEAAER
101: SLYEAIGKKY PPSPERNLAF AERNSENLDR VVPGNYTGGD CIGFGNGGIK PLSSGFTLDF RNPQSCSSIL SVPQSNGLIT IYGDGIDESS KNNRENHQSV
201: WLFRREIEEA NRFNPEENEL IVNFREENCV SKARKNSSRD EICVEEERSS KLPAVFGEDI LRSDVVDKIL VHVPGGESMK EFNALRDVLK KGVEKKKASD
301: AQGGKRRARG RGRGRGRGGG GGQNGKKEVV DLRSLLIHCA QAVAADDRRC AGQLLKQIRL HSTPFGDGNQ RLAHCFANGL EARLAGTGSQ IYKGIVSKPR
401: SAAAVLKAHQ LFLACCPFRK LSYFITNKTI RDLVGNSQRV HVIDFGILYG FQWPTLIHRF SMYGSPKVRI TGIEFPQPGF RPAQRVEETG QRLAAYAKLF
501: GVPFEYKAIA KKWDAIQLED LDIDRDEITV VNCLYRAENL HDESVKVESC RDTVLNLIGK INPDLFVFGI VNGAYNAPFF VTRFREALFH FSSIFDMLET
601: IVPREDEERM FLEMEVFGRE ALNVIACEGW ERVERPETYK QWHVRAMRSG LVQVPFDPSI MKTSLHKVHT FYHKDFVIDQ DNRWLLQGWK GRTVMALSVW
701: KPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.