Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069949 | Potato | cytosol | 93.81 | 93.31 |
| Solyc04g011630.1.1 | Tomato | cytosol | 17.36 | 75.88 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 55.99 | 55.62 |
| GSMUA_Achr10P... | Banana | nucleus | 32.71 | 54.98 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 53.43 | 54.61 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 42.93 | 53.17 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 53.84 | 52.63 |
| GSMUA_Achr10P... | Banana | cytosol | 41.72 | 51.75 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 49.13 | 50.76 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 40.24 | 50.0 |
| Solyc09g010920.1.1 | Tomato | cytosol | 49.66 | 48.49 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 29.74 | 48.46 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 25.3 | 47.96 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.65 | 47.94 |
| Solyc10g086530.1.1 | Tomato | cytosol | 48.32 | 47.17 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 38.22 | 46.41 |
| Zm00001d034664_P001 | Maize | plastid | 34.72 | 46.15 |
| OQU92829 | Sorghum | cytosol | 44.95 | 45.5 |
| Zm00001d028603_P001 | Maize | cytosol | 44.95 | 45.5 |
| Os03t0690600-03 | Rice | cytosol | 43.88 | 44.6 |
| KXG38103 | Sorghum | cytosol | 37.28 | 44.25 |
| Zm00001d011070_P001 | Maize | cytosol | 37.15 | 44.02 |
| KXG21079 | Sorghum | cytosol | 36.88 | 43.98 |
| KXG21080 | Sorghum | cytosol | 37.01 | 43.93 |
| Zm00001d035671_P001 | Maize | cytosol | 36.61 | 43.45 |
| Solyc06g076280.1.1 | Tomato | cytosol | 43.34 | 43.05 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 36.47 | 42.61 |
| KXG37250 | Sorghum | cytosol | 37.15 | 42.4 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 43.61 | 41.75 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 43.47 | 41.73 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 36.07 | 41.61 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 43.2 | 41.37 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 43.74 | 41.3 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 36.34 | 41.1 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 36.34 | 41.1 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 36.2 | 41.07 |
| Solyc06g082530.1.1 | Tomato | cytosol | 36.07 | 41.04 |
| Solyc01g100200.2.1 | Tomato | nucleus | 36.61 | 40.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.53 | 40.06 |
| Zm00001d047813_P002 | Maize | nucleus | 44.41 | 39.81 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 31.9 | 39.77 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 36.88 | 38.92 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 37.01 | 38.57 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 36.88 | 38.11 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 35.67 | 37.54 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 35.94 | 36.83 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 34.72 | 36.8 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 34.05 | 36.67 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 35.67 | 36.35 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 35.26 | 36.24 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 34.99 | 36.06 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 34.86 | 35.92 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 34.86 | 35.87 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 34.32 | 35.32 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 34.59 | 35.3 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 33.92 | 35.24 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 33.78 | 35.06 |
| Zm00001d035670_P001 | Maize | cytosol | 34.19 | 34.99 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 31.76 | 34.91 |
| OQU91407 | Sorghum | nucleus | 32.03 | 34.69 |
| EES18882 | Sorghum | cytosol | 34.19 | 34.65 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 34.72 | 34.08 |
| Zm00001d033166_P001 | Maize | nucleus | 33.51 | 34.02 |
| EES18880 | Sorghum | cytosol | 33.92 | 34.01 |
| EER91260 | Sorghum | nucleus | 32.44 | 33.43 |
| KXG38064 | Sorghum | nucleus | 32.3 | 33.33 |
| OQU91406 | Sorghum | nucleus | 32.84 | 32.62 |
| Solyc06g035620.2.1 | Tomato | cytosol | 13.73 | 31.29 |
| Solyc07g047950.1.1 | Tomato | mitochondrion | 20.19 | 27.52 |
| Solyc07g065270.1.1 | Tomato | nucleus | 19.92 | 27.51 |
| Solyc11g012510.1.1 | Tomato | mitochondrion | 20.05 | 27.49 |
| Solyc04g014830.1.1 | Tomato | mitochondrion | 20.46 | 27.49 |
| Solyc07g063940.1.1 | Tomato | cytosol, nucleus, peroxisome | 19.25 | 24.53 |
| Solyc12g005340.1.1 | Tomato | cytosol | 18.3 | 24.37 |
| Solyc04g064550.1.1 | Tomato | mitochondrion | 17.36 | 22.91 |
| Solyc05g054170.2.1 | Tomato | mitochondrion, nucleus | 8.21 | 18.32 |
| Solyc06g036170.1.1 | Tomato | nucleus | 13.59 | 16.89 |
| Solyc03g025170.1.1 | Tomato | nucleus | 13.46 | 15.85 |
Protein Annotations
| MapMan:15.5.12 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR005202 | UniProt:K4C1Y9 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF44 |
| EnsemblPlantsGene:Solyc05g053090.1 | EnsemblPlants:Solyc05g053090.1.1 | InterPro:TF_GRAS | UniParc:UPI00027660F2 | SEG:seg | : |
Description
No Description!
Coordinates
chr5:-:63211136..63213367
Molecular Weight (calculated)
83811.7 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.416
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQYHEAGSA VKLEDEDCSF FADPNLINNL RVNDYFHDDY DPNLINNLRV SDNLVNISSP FQSDVERNAL VPLTADDFHE DYDFSDGVLK YINQMLMEED
101: IEEKTCMFQE SAALQAAERS FYEVIGEKYP SSTNHEKSST LGQIERYAMG HCSGNDGRDG LLGPNWILDL GEDDVSHVPD DVALDSTSRS SNSLSGTVPD
201: VPVDSPVSTL RIPDIFSGGE SVMQFKKGVE EASKFLPTGN SLLADVRYHV VGKELRYKER KDAVVKVDKY GEKRYTERSR GKKNTFHEDI VDLTEGRNNK
301: QSAVFSESTV RSEMFDRVLL CSAGKNESAL REALQAISRQ NASKNGPSKG SNGKKLQRKK KGGKRDVVDL RTLLTLCAQA VAVGNQRTAN ELLKKIRESS
401: SPMGDGMQRL AHYFADGLEA RMAGSGTHIY KALITRPVSA ADVLKAYHLL LAACPFRTMS SFFSNKTIMN LAEKASTVHI IDIGIMWGFQ WPGLIQRLAS
501: RPGGPPKLRI TGIDFPNPGF RPAERVEETG RRLANYAESF KVPFEFNAIA QKWETVKLED LKINKGEVLV VNCLYRFRNL LDETVVVNSP RDVFLNLIRR
601: LNPDVFILGT VNGGYNAPFF ISRFREALFH YSSLFDMLET IIPREVHERM LVEKNIIGQE AMNAIACEGA ERIERPETYK QWQVRILKAG FRQLPLDEEI
701: MRMTTERFKV YDKNFIIDVD SEWLLQGWKG RIASALSMWK AAY
101: IEEKTCMFQE SAALQAAERS FYEVIGEKYP SSTNHEKSST LGQIERYAMG HCSGNDGRDG LLGPNWILDL GEDDVSHVPD DVALDSTSRS SNSLSGTVPD
201: VPVDSPVSTL RIPDIFSGGE SVMQFKKGVE EASKFLPTGN SLLADVRYHV VGKELRYKER KDAVVKVDKY GEKRYTERSR GKKNTFHEDI VDLTEGRNNK
301: QSAVFSESTV RSEMFDRVLL CSAGKNESAL REALQAISRQ NASKNGPSKG SNGKKLQRKK KGGKRDVVDL RTLLTLCAQA VAVGNQRTAN ELLKKIRESS
401: SPMGDGMQRL AHYFADGLEA RMAGSGTHIY KALITRPVSA ADVLKAYHLL LAACPFRTMS SFFSNKTIMN LAEKASTVHI IDIGIMWGFQ WPGLIQRLAS
501: RPGGPPKLRI TGIDFPNPGF RPAERVEETG RRLANYAESF KVPFEFNAIA QKWETVKLED LKINKGEVLV VNCLYRFRNL LDETVVVNSP RDVFLNLIRR
601: LNPDVFILGT VNGGYNAPFF ISRFREALFH YSSLFDMLET IIPREVHERM LVEKNIIGQE AMNAIACEGA ERIERPETYK QWQVRILKAG FRQLPLDEEI
701: MRMTTERFKV YDKNFIIDVD SEWLLQGWKG RIASALSMWK AAY
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.