Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400049420 | Potato | cytosol | 83.44 | 95.63 |
| Solyc09g010920.1.1 | Tomato | cytosol | 69.65 | 69.65 |
| Solyc04g011630.1.1 | Tomato | cytosol | 14.59 | 65.29 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 57.29 | 61.5 |
| GSMUA_Achr10P... | Banana | nucleus | 33.64 | 57.92 |
| KRH65839 | Soybean | cytosol, plastid | 53.61 | 55.89 |
| KRG99969 | Soybean | cytosol | 53.75 | 55.5 |
| KRH49113 | Soybean | cytosol | 53.48 | 55.45 |
| GSMUA_Achr10P... | Banana | cytosol | 42.31 | 53.76 |
| CDX79750 | Canola | peroxisome | 46.25 | 52.23 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 46.12 | 52.15 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 45.86 | 51.86 |
| AT2G37650.1 | Thale cress | cytosol | 48.23 | 51.11 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 26.28 | 51.02 |
| Zm00001d034664_P001 | Maize | plastid | 37.06 | 50.45 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 40.47 | 50.33 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 39.03 | 49.67 |
| Zm00001d028603_P001 | Maize | cytosol | 47.44 | 49.18 |
| OQU92829 | Sorghum | cytosol | 46.91 | 48.64 |
| Solyc05g053090.1.1 | Tomato | cytosol | 47.17 | 48.32 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.15 | 48.18 |
| Os03t0690600-03 | Rice | cytosol | 46.25 | 48.15 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 28.52 | 47.59 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 39.29 | 47.01 |
| KXG37250 | Sorghum | cytosol | 40.08 | 46.85 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 38.5 | 45.5 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 39.03 | 45.34 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 38.9 | 45.05 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 38.76 | 44.9 |
| Solyc06g076280.1.1 | Tomato | cytosol | 43.89 | 44.65 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 45.07 | 44.2 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 44.94 | 44.19 |
| KXG38103 | Sorghum | cytosol | 36.27 | 44.09 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 44.94 | 44.07 |
| KXG21079 | Sorghum | cytosol | 35.87 | 43.82 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 45.07 | 43.58 |
| Zm00001d011070_P001 | Maize | cytosol | 35.74 | 43.38 |
| Zm00001d035671_P001 | Maize | cytosol | 35.61 | 43.29 |
| KXG21080 | Sorghum | cytosol | 35.48 | 43.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.19 | 42.94 |
| Zm00001d047813_P002 | Maize | nucleus | 46.25 | 42.46 |
| Solyc06g082530.1.1 | Tomato | cytosol | 36.4 | 42.42 |
| Solyc01g100200.2.1 | Tomato | nucleus | 36.79 | 42.04 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 32.72 | 41.78 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 35.22 | 38.84 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 35.35 | 38.21 |
| OQU91407 | Sorghum | nucleus | 33.9 | 37.61 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 35.22 | 37.27 |
| EER91260 | Sorghum | nucleus | 35.22 | 37.17 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 34.69 | 37.03 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 32.85 | 36.98 |
| EES18882 | Sorghum | cytosol | 35.61 | 36.97 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 34.69 | 36.92 |
| Zm00001d035670_P001 | Maize | cytosol | 35.22 | 36.91 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 34.95 | 36.89 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 34.69 | 36.87 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 34.95 | 36.84 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 34.95 | 36.69 |
| KXG38064 | Sorghum | nucleus | 34.56 | 36.53 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 33.64 | 36.52 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 33.77 | 36.4 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 34.82 | 36.4 |
| Zm00001d033166_P001 | Maize | nucleus | 34.82 | 36.2 |
| OQU91406 | Sorghum | nucleus | 35.48 | 36.1 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 34.17 | 36.01 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 34.17 | 35.96 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 34.43 | 35.94 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 33.51 | 35.37 |
| EES18880 | Sorghum | cytosol | 33.77 | 34.68 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 33.51 | 33.69 |
| Solyc06g035620.2.1 | Tomato | cytosol | 12.62 | 29.45 |
| Solyc07g047950.1.1 | Tomato | mitochondrion | 19.45 | 27.16 |
| Solyc07g065270.1.1 | Tomato | nucleus | 18.79 | 26.58 |
| Solyc11g012510.1.1 | Tomato | mitochondrion | 18.53 | 26.01 |
| Solyc04g014830.1.1 | Tomato | mitochondrion | 18.79 | 25.86 |
| Solyc12g005340.1.1 | Tomato | cytosol | 17.61 | 24.01 |
| Solyc07g063940.1.1 | Tomato | cytosol, nucleus, peroxisome | 17.74 | 23.16 |
| Solyc04g064550.1.1 | Tomato | mitochondrion | 15.51 | 20.96 |
| Solyc05g054170.2.1 | Tomato | mitochondrion, nucleus | 8.8 | 20.12 |
| Solyc06g036170.1.1 | Tomato | nucleus | 13.67 | 17.39 |
| Solyc03g025170.1.1 | Tomato | nucleus | 14.32 | 17.27 |
Protein Annotations
| MapMan:15.5.12 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR005202 | UniProt:K4D484 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF44 |
| EnsemblPlantsGene:Solyc10g086530.1 | EnsemblPlants:Solyc10g086530.1.1 | InterPro:TF_GRAS | UniParc:UPI00027694D6 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:+:65322155..65324440
Molecular Weight (calculated)
86542.0 Da
IEP (calculated)
6.166
GRAVY (calculated)
-0.521
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPRFNRFPT TVNGFNLENQ SLLSFSDNWK NNEPIIGAIY PDQKIVNAPT FENSFIQQTV PSLSNDPSTT SNIALTSEMG TEDEYNEDFD FSDTVLSYIN
101: QMLMEEDMED KTHMLHESLE LQAKERSFYE ALGKKYPPSP HQNLAITEQN GEIPEDYYSA SLYSSTSNVI DTSGYLIDPS ISNDHNYSYE QGLFICNGPY
201: SSISSSNSIN NLGDGFLDSP VSPLHIPDIY NDSHPIWKFR KGVEEASKFL PTYSKLLDNV VINDLLPQAK RGESGCAAAQ VEKRDVGATS PTGPRGTKNP
301: HRDDRDSEEE EERRSKQAAV YAESTVRSDE FDVILLHSMG DGREALTAYR ESLKNARTKP TVQSKGFAVG RGGRGKKQSG KKEVIDLRSL LINCAQAVAA
401: DDCRSATELL KQVRLHSSPF GDGNQRLAHC FADGLEARLA GTGSQIYKAL VNKRTSAADF LKAYHLYLAS CPFRKISGFT SNKTIIRKSK HATRVHIIDF
501: GILYGFQWPT LIQRIAAREG GPPNLRITGI EFPQPGFRPA ERIEETGRRL SDYAKSFNVP FEYQAIAKKW ETIRVEDLKL EKDEYLVVNC LYRFKNLHDE
601: TVLSDSSRTL VLNLIREINP DIFIHGIVNG AYSAPFFVTR FREVLFHFSA LFDMLEANVP REFPERLLIE REIFGREALN VIACEGWERV ERPETYKQWQ
701: VRHLRARFTQ TPFEQEEIMN MAVKKVRTSY HKDFIIDQDN KWMLLGWKGR TIYALSCWTP I
101: QMLMEEDMED KTHMLHESLE LQAKERSFYE ALGKKYPPSP HQNLAITEQN GEIPEDYYSA SLYSSTSNVI DTSGYLIDPS ISNDHNYSYE QGLFICNGPY
201: SSISSSNSIN NLGDGFLDSP VSPLHIPDIY NDSHPIWKFR KGVEEASKFL PTYSKLLDNV VINDLLPQAK RGESGCAAAQ VEKRDVGATS PTGPRGTKNP
301: HRDDRDSEEE EERRSKQAAV YAESTVRSDE FDVILLHSMG DGREALTAYR ESLKNARTKP TVQSKGFAVG RGGRGKKQSG KKEVIDLRSL LINCAQAVAA
401: DDCRSATELL KQVRLHSSPF GDGNQRLAHC FADGLEARLA GTGSQIYKAL VNKRTSAADF LKAYHLYLAS CPFRKISGFT SNKTIIRKSK HATRVHIIDF
501: GILYGFQWPT LIQRIAAREG GPPNLRITGI EFPQPGFRPA ERIEETGRRL SDYAKSFNVP FEYQAIAKKW ETIRVEDLKL EKDEYLVVNC LYRFKNLHDE
601: TVLSDSSRTL VLNLIREINP DIFIHGIVNG AYSAPFFVTR FREVLFHFSA LFDMLEANVP REFPERLLIE REIFGREALN VIACEGWERV ERPETYKQWQ
701: VRHLRARFTQ TPFEQEEIMN MAVKKVRTSY HKDFIIDQDN KWMLLGWKGR TIYALSCWTP I
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.