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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:
  • nucleus 3
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07777 Canola cytosol, nucleus, peroxisome 99.41 99.41
AT2G37650.1 Thale cress cytosol 85.44 80.08
PGSC0003DMT400049420 Potato cytosol 51.11 51.81
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 23.92 50.79
GSMUA_Achr10P... Banana nucleus 32.1 48.87
VIT_08s0007g00510.t01 Wine grape cytosol, plastid 51.41 48.8
KRH49113 Soybean cytosol 52.6 48.23
KRH65839 Soybean cytosol, plastid 52.3 48.22
KRG99969 Soybean cytosol 52.6 48.03
Solyc10g086530.1.1 Tomato cytosol 52.15 46.12
GSMUA_Achr8P02550_001 Banana nucleus 26.75 45.92
PGSC0003DMT400022997 Potato cytosol, plastid 51.86 45.86
GSMUA_Achr10P... Banana cytosol 40.71 45.74
Solyc09g010920.1.1 Tomato cytosol 51.56 45.6
TraesCS1B01G037500.1 Wheat cytosol 26.89 43.83
GSMUA_Achr6P34090_001 Banana nucleus 39.82 43.79
HORVU3Hr1G012520.1 Barley cytosol 29.57 43.64
Zm00001d034664_P001 Maize plastid 35.81 43.11
GSMUA_Achr7P15080_001 Banana cytosol 37.89 42.64
Os03t0690600-03 Rice cytosol 45.62 42.0
Zm00001d028603_P001 Maize cytosol 45.02 41.28
OQU92829 Sorghum cytosol 45.02 41.28
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 38.78 41.04
KXG38103 Sorghum cytosol 37.44 40.26
KXG21079 Sorghum cytosol 37.0 39.97
Bra015584.1-P Field mustard cytosol 25.85 39.91
TraesCS5A01G481300.1 Wheat cytosol 38.63 39.69
KXG37250 Sorghum cytosol 38.34 39.63
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 37.89 39.6
Bra033813.1-P Field mustard nucleus 34.18 39.52
TraesCS5D01G494900.1 Wheat cytosol 38.48 39.42
TraesCS5B01G494500.1 Wheat cytosol 38.48 39.42
Bra028391.1-P Field mustard nucleus 36.11 39.19
KXG21080 Sorghum cytosol 36.4 39.14
Zm00001d035671_P001 Maize cytosol 36.4 39.14
Zm00001d011070_P001 Maize cytosol 36.11 38.76
Bra028390.1-P Field mustard cytosol 40.12 38.24
TraesCS5D01G152700.1 Wheat cytosol, plastid 43.39 37.73
TraesCS5A01G139000.1 Wheat cytosol, plastid 43.39 37.63
Bra030688.1-P Field mustard nucleus 41.46 37.55
Bra035653.1-P Field mustard cytosol 40.27 37.53
TraesCS5B01G138100.1 Wheat cytosol, plastid 43.24 37.5
GSMUA_AchrUn_... Banana cytosol 36.7 37.48
HORVU5Hr1G045020.29 Barley cytosol 43.69 37.36
HORVU3Hr1G012550.6 Barley cytosol 32.99 37.25
Zm00001d047813_P002 Maize nucleus 45.62 37.03
Zm00001d035670_P001 Maize cytosol 37.59 34.85
EES18882 Sorghum cytosol 37.74 34.65
TraesCS1B01G037300.1 Wheat cytosol 35.96 34.38
TraesCS1D01G030900.1 Wheat cytosol 36.26 34.22
Bra031581.1-P Field mustard cytosol 33.58 33.83
TraesCS3D01G067900.1 Wheat nucleus 34.62 33.77
EES18880 Sorghum cytosol 37.15 33.74
OQU91407 Sorghum nucleus 34.32 33.67
HORVU1Hr1G004440.1 Barley cytosol 35.96 33.66
Bra031580.1-P Field mustard cytosol 34.47 33.62
EER91260 Sorghum nucleus 35.96 33.56
TraesCS1D01G031000.1 Wheat cytosol 36.11 33.52
TraesCS1D01G030800.1 Wheat cytosol 34.77 33.38
TraesCS1B01G037400.1 Wheat cytosol 35.36 32.92
TraesCS3B01G081100.1 Wheat nucleus 34.77 32.73
TraesCS3D01G067700.1 Wheat cytosol 35.07 32.69
TraesCS3D01G067800.1 Wheat nucleus 32.69 32.54
TraesCS3A01G068000.1 Wheat nucleus 34.62 32.54
TraesCS1A01G030300.1 Wheat cytosol 34.03 32.44
KXG38064 Sorghum nucleus 34.62 32.36
TraesCS3B01G080900.1 Wheat nucleus 34.62 32.32
Zm00001d033166_P001 Maize nucleus 35.07 32.24
Bra015156.1-P Field mustard cytosol 15.16 32.08
TraesCS1D01G031200.1 Wheat cytosol 34.62 31.96
TraesCS1A01G030200.1 Wheat cytosol 34.03 31.76
TraesCS3A01G067900.1 Wheat cytosol 33.88 31.58
TraesCS3B01G081000.1 Wheat cytosol 34.03 31.46
Bra026077.1-P Field mustard cytosol 13.67 31.29
OQU91406 Sorghum nucleus 34.77 31.28
TraesCS1B01G037200.1 Wheat nucleus 33.43 29.72
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 16.79 27.7
Bra026237.1-P Field mustard plastid 20.95 26.36
Bra018860.1-P Field mustard nucleus 20.06 25.71
Bra021063.1-P Field mustard plastid 20.21 25.66
Bra036185.1-P Field mustard cytosol 18.72 25.45
Bra020715.1-P Field mustard cytosol, plastid 18.57 25.15
Bra012280.1-P Field mustard cytosol 18.57 22.77
Bra028312.1-P Field mustard cytosol 15.01 22.25
Bra022596.1-P Field mustard plastid 16.94 19.69
Protein Annotations
MapMan:15.5.12EnsemblPlantsGene:Bra000012EnsemblPlants:Bra000012.1EnsemblPlants:Bra000012.1-PGO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202
UniProt:M4C734PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636PANTHER:PTHR31636:SF44InterPro:TF_GRAS
UniParc:UPI0002540009SEG:seg::::
Description
AT2G37650 (E=2e-295) | scarecrow-like transcription factor 9 (SCL9)
Coordinates
chrA03:+:8835368..8837389
Molecular Weight (calculated)
75555.8 Da
IEP (calculated)
6.874
GRAVY (calculated)
-0.433
Length
673 amino acids
Sequence
(BLAST)
001: MITDPAPVDR PRLPDQPSSL TLFDGYNYSH GLSNNQNAFV TSAAGEEEDP ADEFDFSDAV LGYISQILME EDMDDRVCML QESLDLVAAE RSLYEAIGKK
101: YPPSPERSSP YVENLDHVVP AGDRNGSGGG FMSGGMKPMS GGGFTLDFRN PQSRCSPVLS VPQSPYGVHE SSNASREDQS VWLFRRGVEE GSERNEMIVN
201: FREDSRSKGR RNPNSGEEER CSKLPAVFSE TILRSDVVDK ILVHVPGGES MKEFDALREV LKKGVGKKKA SAPQEGKRRA RGRGRGRGGG GVKKEVVDLR
301: SLLIHCAQAV AADDSRCAGQ LLKQIRQHST PFGDGNQRLA HCFANGLEAR LAGTGSQIYK GIVSKPRSAA AVLKAHQLFL ACCPFRKLSY FITNKTIRDL
401: VGNSPRVHVI DFGILYGFQW PTLIHRFSIY GKPKVRVTGI EFPQPGFRPT QRVEETGERL AAYAEQFGVP FEYKAIAKKW DAVQLEDLDI DRDEITVVNC
501: LYRAENLHDE SVKVESCRDA VLSLIGKINP DLFVFGIVNG AYNAPFFVTR FREALFHFSS IFDMLETIVP REDEERMFLE MEVFGREALN VIACEGWERV
601: ERPETYKQWH VRAMRSGLVQ VPFDPDIMKT SLRKVNTFYH KDFVIDQDNR WLLQGWKGRT VMALSVWKPE SKA
Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.