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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15616 Canola nucleus 94.48 98.18
AT1G07530.1 Thale cress cytosol 82.77 79.97
Bra028390.1-P Field mustard cytosol 65.55 68.98
Bra035653.1-P Field mustard cytosol 59.62 61.36
KRH24780 Soybean cytosol 51.01 57.42
KRH29779 Soybean cytosol 51.82 51.89
VIT_06s0004g04950.t01 Wine grape cytosol 52.22 51.46
GSMUA_Achr10P... Banana nucleus 30.01 50.45
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 21.27 49.84
KRH23089 Soybean cytosol 41.05 47.36
GSMUA_Achr10P... Banana cytosol 37.82 46.91
KRH10243 Soybean nucleus 41.72 46.62
VIT_06s0004g04960.t01 Wine grape nucleus 49.8 46.42
Bra028391.1-P Field mustard nucleus 38.09 45.65
GSMUA_Achr8P02550_001 Banana nucleus 23.69 44.9
Bra015584.1-P Field mustard cytosol 25.84 44.04
TraesCS1B01G037500.1 Wheat cytosol 24.36 43.83
KRH23090 Soybean vacuole 36.61 43.8
GSMUA_Achr7P15080_001 Banana cytosol 35.13 43.65
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 37.01 43.24
HORVU3Hr1G012520.1 Barley cytosol 26.51 43.2
Bra031581.1-P Field mustard cytosol 38.36 42.66
Zm00001d034664_P001 Maize plastid 32.03 42.58
KXG38103 Sorghum cytosol 35.4 42.01
GSMUA_Achr6P34090_001 Banana nucleus 34.59 41.99
Bra033813.1-P Field mustard nucleus 32.57 41.58
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 37.55 41.46
Bra031580.1-P Field mustard cytosol 38.36 41.3
OQU92829 Sorghum cytosol 40.51 41.01
KXG21079 Sorghum cytosol 34.19 40.77
Os03t0690600-03 Rice cytosol 40.11 40.77
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 35.26 40.68
Zm00001d011070_P001 Maize cytosol 34.19 40.51
TraesCS5D01G494900.1 Wheat cytosol 35.8 40.49
TraesCS5B01G494500.1 Wheat cytosol 35.8 40.49
Zm00001d028603_P001 Maize cytosol 39.97 40.46
TraesCS5A01G481300.1 Wheat cytosol 35.67 40.46
KXG21080 Sorghum cytosol 33.51 39.78
Zm00001d035671_P001 Maize cytosol 33.38 39.62
KXG37250 Sorghum cytosol 34.59 39.48
GSMUA_AchrUn_... Banana cytosol 32.84 37.03
TraesCS5A01G139000.1 Wheat cytosol, plastid 38.09 36.47
TraesCS5D01G152700.1 Wheat cytosol, plastid 37.95 36.43
HORVU3Hr1G012550.6 Barley cytosol 29.21 36.41
TraesCS5B01G138100.1 Wheat cytosol, plastid 37.82 36.21
HORVU5Hr1G045020.29 Barley cytosol 38.22 36.09
Zm00001d047813_P002 Maize nucleus 39.7 35.59
TraesCS1B01G037300.1 Wheat cytosol 33.38 35.23
Zm00001d035670_P001 Maize cytosol 34.32 35.12
EES18882 Sorghum cytosol 34.19 34.65
Bra026077.1-P Field mustard cytosol 13.46 34.01
TraesCS1A01G030300.1 Wheat cytosol 32.17 33.85
TraesCS1D01G030900.1 Wheat cytosol 32.44 33.8
HORVU1Hr1G004440.1 Barley cytosol 32.44 33.52
TraesCS1D01G030800.1 Wheat cytosol 31.49 33.38
TraesCS3D01G067900.1 Wheat nucleus 30.96 33.33
EES18880 Sorghum cytosol 33.11 33.2
EER91260 Sorghum nucleus 32.17 33.15
TraesCS1D01G031000.1 Wheat cytosol 32.3 33.1
TraesCS3B01G080900.1 Wheat nucleus 32.03 33.01
TraesCS3D01G067700.1 Wheat cytosol 32.03 32.96
TraesCS3A01G067900.1 Wheat cytosol 32.03 32.96
OQU91407 Sorghum nucleus 30.42 32.94
TraesCS1D01G031200.1 Wheat cytosol 32.17 32.78
KXG38064 Sorghum nucleus 31.49 32.5
TraesCS1A01G030200.1 Wheat cytosol 31.49 32.45
TraesCS3D01G067800.1 Wheat nucleus 29.48 32.4
TraesCS1B01G037400.1 Wheat cytosol 31.49 32.37
TraesCS3B01G081100.1 Wheat nucleus 30.96 32.17
TraesCS3A01G068000.1 Wheat nucleus 30.96 32.12
Bra015156.1-P Field mustard cytosol 13.73 32.08
TraesCS3B01G081000.1 Wheat cytosol 31.36 32.01
Zm00001d033166_P001 Maize nucleus 31.22 31.69
OQU91406 Sorghum nucleus 31.36 31.15
TraesCS1B01G037200.1 Wheat nucleus 31.36 30.78
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 15.88 28.92
Bra026237.1-P Field mustard plastid 19.52 27.1
Bra018860.1-P Field mustard nucleus 19.11 27.05
Bra021063.1-P Field mustard plastid 18.98 26.6
Bra020715.1-P Field mustard cytosol, plastid 17.5 26.16
Bra036185.1-P Field mustard cytosol 17.36 26.06
Bra012280.1-P Field mustard cytosol 17.23 23.32
Bra028312.1-P Field mustard cytosol 13.73 22.47
Bra022596.1-P Field mustard plastid 16.02 20.55
Protein Annotations
MapMan:15.5.12EnsemblPlantsGene:Bra030688EnsemblPlants:Bra030688.1EnsemblPlants:Bra030688.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009410GO:GO:0009987
GO:GO:0045893InterPro:IPR005202UniProt:M4EPG8PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636
PANTHER:PTHR31636:SF132InterPro:TF_GRASUniParc:UPI0002546D66SEG:seg::
Description
AT1G07530 (E=0.0) SCL14, ATGRAS2, GRAS2 | SCL14 (SCARECROW-LIKE 14); transcription factor
Coordinates
chrA08:+:20798351..20800582
Molecular Weight (calculated)
83066.2 Da
IEP (calculated)
5.494
GRAVY (calculated)
-0.536
Length
743 amino acids
Sequence
(BLAST)
001: MGSYSGGSLD GFDFTSEFDN LPASNQTVDS SDGFYLDDPL LNFVSFDHSS APPPETYPQK NVAAASGDRL ASPSDDSEFS DSVLKYISQV LMEEDMEEKP
101: CMFHDALALQ AAEKSLYEAL GEQYPSSVEH GASYPEKLAE DSPDGSFPSG GGFSDYASTT TSSDSHWSLD GLENNNRPSW LQTPFPSNFV FQSTSRSTSV
201: NSGGNTASFG SSMFKDNELA MQFKRGVDEA SKFLPKSSQL FIDVDSYVPK NTSEVFVKTE KKDESEHPPP PPPPPSNSRL TGKKKSHWRD EDEDLADERS
301: NKQSAVYVEE TELSEMFDKI LLCGGTGQPV CITDQKFPTE AKTRGKKSTA TTTNSNSSKG SKKETADLRT LLVLCAQAVS VDDRRTANEM LRQIREHSSP
401: LGNGSERLAH YFANSLEARL AGTGTQIYTA LSSKKTSAAD MLKAYQTYIS VCPFKKAAII FANHSIMRLT ANADTIHIVD FGISYGFQWP ALIHRLSFRP
501: GGPPKLRITG IELPQRGFRP AEGVHETGHR LARYCQRYKV PFEYNAIAQK WETIRVEDLK IEQGEFVVVN SLFRFKNLLD ETVVVNSPRD AVLKLIRKAN
601: PSVFIQAVLS GSYNAPFFVT RFREALFHYS ALFDMCDSKL AREDEMRLMF EKEFYGREIM NVVACEGTER VERPESYKQW QARVIRAGFK QLPLEKELMQ
701: NLKLKIENGY DKNFDIDQNG NWLLQGWKGR IVYASSVWVP SSS
Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.